Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01908 ATGGGTTCGTTAAAAAATGGTCAAAATGTGAACTTTAGTGCTCCAAGGCCATTTGGGAAGAGGCTGAAATCGGATCTGAAAGAGACTTTTTTCCCTGATGATCCTTTCAAACAATTTCGAGATGAAAGAGGGGCAATGCATAGAGTGAAAAAGGGATTTCAATACTTCATACCTATTTTGCAATGGCTTCCTAAATACAATTTGAATATGTTTAAATATGATTTGCTTGCTGGTATTACCATTACTAGCCTTGCTATTCCTCAAGGCATTAGTTATGCCAAACTTGGCATTCTACCCCCCATCATCGGCCTTTATTCTAGCTTTGTTCCGCCCCTTGTATACGCGGTGTTTGGAAGCTCTAAACATCTGGCGGTGGGAACGGTGGCGGCTTGTTCGTTGCTCATATCGGAAACTATTGGTGCAGTTGCTTCGCCGGAAGAAGAACCCACATTGTATCTTCATTTGGTTTTCACCGCCACCTTTGTCACCGGCATCATGCAGGCCGTCTTAGGATTTCTAAGATTGGGAATTTTAGTGGATTTCTTATCGCACTCCACAATCCTTGGATTTATGGGAGGAACGGCTGTGATCATCTGTCTTCAACAACTGAAGGGGATATTTGGACTAACTCATTTCACCTCTAAAACTGACGTCTACTCTGTACTTCATGCCGTTTTCTCTCTTAGAAAAGAGTGGAAATGGGAAAGTGCTCTTGTGGGTGTTGTTTTCCTTTTATTCCTCCAGTTTACAAGGTACTTGAGAAACAGAAACCCAAAGCTCTTTTGGGTGTCAGCTATGGCTCCCATGGTGACAGTGATAATAGGATGTTTGTTTGCCTATTTCATCAAGGGAAGTCAGCATGGAATCTTAACTGTGGGTCACTTGAGCAAAGGGATAAACCCTATTTCTATTCACTTCTTGAACTTTGATTCCAAATATCTATCAGCTGTAGTACAAACTGGCTTAATCACTGGCCTTATTGCTTTGGCTGAAGGAATAGCAATTGGTCGAAGCTTTGCGATAATAAAAAATGAACAAATCGATGGGAACAAGGAGATGATAGCCTTTGGTTTGATGAACATAGTAGGATCTTTCACTTCCTGCTACTTAACCACTGGGCCATTCTCAAAAACTGCAGTGAACTTCAATGCTGGGTGTAGAACAGCAATGTCAAACATTGTTATGGCAATTTTCATGGCTCTCACTCTCCTCTTTCTAGCTCCTGTCTTCAGCTACACACCTCTTGTCGCCCTTTCCGCCATTATAATGTCTGCCATGCTTGGTCTCATCAAATATGAAGAAATGTATCATCTTCTCAAAGTTGATAAATTTGATTTTTGCATTTGTATGGCGGCTTTCTTGGGTGTTGCTTTCTTAAGCATGGATGTTGGCATCATGCTTTCGGTGGGACTTGCTTTGCTGAGAGCTCTTCTTTACATGGCTAGACCAGCTACTTGCAAGCTCGGCAAAATACCAAACTCCAATTTGTACAGAGATGTGGAACAATATCCTAATGCAACTAGAAACCATGGGATTATTGTTCTTCAACTTGGTTCCCCTATTTATTATGCCAACTCCAACTACATCAGAGAAAGGATTTTCAGATGGGTTCGTGATGAGCAGGGCAATTTCGAGGATGGACCTGTCGAACATATACTCTTGGAGTTGAGCGGAGTCACCTCAATCGACATGACAGGGCTTGAAACGCTAATCGAAATTCGTAGATCATTACAAGCAAACGGAATCCAGATGGGAATTGTAAACCCAAGAATTGTAGTGATGGAGAAGATGATAGCTTCGAAATTCACAGACACAATCGGGAAAGAGAACATCTATTTATCAGTAGATGAAGGAGTAGAAAGGTGCAGAGATTTGGTTCCGAAATTAAAACAAACAGAAACAGGTGCTGGAAGTTCAAACATGAGGACAATGGAGCAGCAAGTATAA 1947 41.55 MGSLKNGQNVNFSAPRPFGKRLKSDLKETFFPDDPFKQFRDERGAMHRVKKGFQYFIPILQWLPKYNLNMFKYDLLAGITITSLAIPQGISYAKLGILPPIIGLYSSFVPPLVYAVFGSSKHLAVGTVAACSLLISETIGAVASPEEEPTLYLHLVFTATFVTGIMQAVLGFLRLGILVDFLSHSTILGFMGGTAVIICLQQLKGIFGLTHFTSKTDVYSVLHAVFSLRKEWKWESALVGVVFLLFLQFTRYLRNRNPKLFWVSAMAPMVTVIIGCLFAYFIKGSQHGILTVGHLSKGINPISIHFLNFDSKYLSAVVQTGLITGLIALAEGIAIGRSFAIIKNEQIDGNKEMIAFGLMNIVGSFTSCYLTTGPFSKTAVNFNAGCRTAMSNIVMAIFMALTLLFLAPVFSYTPLVALSAIIMSAMLGLIKYEEMYHLLKVDKFDFCICMAAFLGVAFLSMDVGIMLSVGLALLRALLYMARPATCKLGKIPNSNLYRDVEQYPNATRNHGIIVLQLGSPIYYANSNYIRERIFRWVRDEQGNFEDGPVEHILLELSGVTSIDMTGLETLIEIRRSLQANGIQMGIVNPRIVVMEKMIASKFTDTIGKENIYLSVDEGVERCRDLVPKLKQTETGAGSSNMRTMEQQV* 649
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22154099 22157367 - Chy2G041750.1 Chy02g01908 221356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01908 648 ProSitePatterns SLC26A transporters signature. 100 121 IPR018045 GO:0008271|GO:0008272
Chy02g01908 648 CDD STAS_SulP_like_sulfate_transporter 503 615 - -
Chy02g01908 648 Gene3D STAS domain 482 625 IPR036513 -
Chy02g01908 648 PANTHER SULFATE TRANSPORTER 3.5-RELATED 6 630 IPR030316 GO:1902358
Chy02g01908 648 PANTHER SULFATE TRANSPORTER 6 630 IPR001902 GO:0015301|GO:0016020|GO:0055085
Chy02g01908 648 Pfam Sulfate permease family 71 452 IPR011547 GO:0016021
Chy02g01908 648 SUPERFAMILY SpoIIaa-like 504 623 IPR036513 -
Chy02g01908 648 Pfam STAS domain 503 617 IPR002645 -
Chy02g01908 648 ProSiteProfiles STAS domain profile. 502 622 IPR002645 -
Chy02g01908 648 TIGRFAM sulP: sulfate permease 58 617 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01908 Chy-Chr2:22154099 Chy06g00551 Chy-Chr6:3756750 0 dispersed
Chy02g01908 Chy-Chr2:22154099 Chy01g01556 Chy-Chr1:21486310 0 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01908 K17471 - csv:116402148 1242.25