Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01912 ATGAACCAAAATAATAATCATACTCACTGCAATGGAAAAAATTCTGATTCTCATCTCAATATACCTCAAATCAAATTCACTAAACTCTTCATCAATGGACAATTCGTTGATTCCGTTTCAGGAAAAACTTTTGATACCATAGATCCGAGAACCGAGGAAGTTATTGCCACGGTTGCCGCCGGTGACAAAGAAGATGTTGATCTCGCCGTGAAAGCCGCCCGTGAAGCCTTTGACCATGGCCCTTGGCCCCGTATGTCCGGCGCCGAGAGAGGGAGGATAATGACGAAACTAGCGGGATTGATAGATGAACACAAGGAGGAACTGGCAGCGTTGGATACGATTGACGCTGGAAAATTGTTTCTGTTAGGAAAGATCGTGGATATACCGGGAGCTGCAAATACACTACGGTACTACGCAGGTGCAGCGGATAAATTCCACGGTGAGGTATTGAAAATGGCAAAACCGCTTCACGGTTACACGTTATTGGAACCCATCGGAGTGGTGGGCCACATCATACCCTGGAATTTTCCCACCACCATGTTCTGGCTCAAAGTCAGCCCGGCGTTAGCCGCCGGTTGCACCATGATCGTCAAGCCCGCCGAACAAACGCCCCTCTCCGCACTCTTTTACGCCCATCTCGCTAAACTGGCTGGTATACCAGATGGAGTACTCAACGTTGTGACTGGATATGGTTCCACAGCAGGTTCAAGCATTGCCAACCACATGGACGTTGACAAGTTGAGCTTCACAGGATCAACCAAAGTGGGAAGACTAGTAATGCAAGCAGCAAGTGCCAGTAATCTGAAGCAAGTGTCCTTAGAATTAGGAGGCAAATCGCCACTTCTGATCTTTAATGATGCGGATCTCCAAAAAGCCGCTGATCTAGCTCTCCTTGCCATCTTTTACAACAAGGGAGAAATTTGCGTGGCTGGCTCTCGAGTTTTAGTTCAAGAAGGAATCTACGACGAATTTGTGAAAAAAATAACTGAAAAGGCAAAATCTTGGGATGTGGGGGACCCTTTTGACCCTAATGTTAAATATGGACCCCAGGTGGATAAAAAGCAAATGGATAAGATTTTGAAATACATAGAAGATGGTAAAAGAGAGGGAGCAACATTGGTAACTGGGGGCAAGCGTATAGGAAATGTGGGCTATTACATTGAACCCACAATCTTTACAAATGTCAAGGAAGATTCACTAATTGCTCAAGACGAAATATTCGGACCGGTCCTCTCTGTCATTAAATTCAAGACAATTGAAGATGGAATCAGGAGTGCAAACAATACCAAGTATGGGCTAGCAGCTGGGATAGTGACTAATAGCTTAGACATAGCGAACACGGTGTCGAGGTCCATCCGAGCGGGTACGATTTGGATAAATTGTTACTTTGCTTTCGATCCAAGCTGCCCATTTGGAGGGTATAAGGAAAGTGGGTTCGGAAGAGACTCCGGAATGCATGCGATTAACAAGTATCTTCAAACTAAGTCTGTTGTGACTCCTTTGGTTAACACTCCTTGGCTTTGA 1524 45.41 MNQNNNHTHCNGKNSDSHLNIPQIKFTKLFINGQFVDSVSGKTFDTIDPRTEEVIATVAAGDKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMTKLAGLIDEHKEELAALDTIDAGKLFLLGKIVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGSTAGSSIANHMDVDKLSFTGSTKVGRLVMQAASASNLKQVSLELGGKSPLLIFNDADLQKAADLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKAKSWDVGDPFDPNVKYGPQVDKKQMDKILKYIEDGKREGATLVTGGKRIGNVGYYIEPTIFTNVKEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKESGFGRDSGMHAINKYLQTKSVVTPLVNTPWL* 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22294797 22297956 - Chy2G041790.1 Chy02g01912 221360
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01912 507 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 12 507 - -
Chy02g01912 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 31 495 IPR016162 GO:0016491
Chy02g01912 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 277 466 IPR016163 GO:0016620
Chy02g01912 507 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 507 - -
Chy02g01912 507 SUPERFAMILY ALDH-like 21 503 IPR016161 GO:0016491
Chy02g01912 507 Pfam Aldehyde dehydrogenase family 35 497 IPR015590 GO:0016491
Chy02g01912 507 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 301 312 IPR016160 GO:0016491
Chy02g01912 507 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 273 280 IPR029510 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01912 Chy-Chr2:22294797 Chy02g02570 Chy-Chr2:28916466 0 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01912 K12355 - csv:101219029 986.867