Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01912 ATGAACCAAAATAATAATCATACTCACTGCAATGGAAAAAATTCTGATTCTCATCTCAATATACCTCAAATCAAATTCACTAAACTCTTCATCAATGGACAATTCGTTGATTCCGTTTCAGGAAAAACTTTTGATACCATAGATCCGAGAACCGAGGAAGTTATTGCCACGGTTGCCGCCGGTGACAAAGAAGATGTTGATCTCGCCGTGAAAGCCGCCCGTGAAGCCTTTGACCATGGCCCTTGGCCCCGTATGTCCGGCGCCGAGAGAGGGAGGATAATGACGAAACTAGCGGGATTGATAGATGAACACAAGGAGGAACTGGCAGCGTTGGATACGATTGACGCTGGAAAATTGTTTCTGTTAGGAAAGATCGTGGATATACCGGGAGCTGCAAATACACTACGGTACTACGCAGGTGCAGCGGATAAATTCCACGGTGAGGTATTGAAAATGGCAAAACCGCTTCACGGTTACACGTTATTGGAACCCATCGGAGTGGTGGGCCACATCATACCCTGGAATTTTCCCACCACCATGTTCTGGCTCAAAGTCAGCCCGGCGTTAGCCGCCGGTTGCACCATGATCGTCAAGCCCGCCGAACAAACGCCCCTCTCCGCACTCTTTTACGCCCATCTCGCTAAACTGGCTGGTATACCAGATGGAGTACTCAACGTTGTGACTGGATATGGTTCCACAGCAGGTTCAAGCATTGCCAACCACATGGACGTTGACAAGTTGAGCTTCACAGGATCAACCAAAGTGGGAAGACTAGTAATGCAAGCAGCAAGTGCCAGTAATCTGAAGCAAGTGTCCTTAGAATTAGGAGGCAAATCGCCACTTCTGATCTTTAATGATGCGGATCTCCAAAAAGCCGCTGATCTAGCTCTCCTTGCCATCTTTTACAACAAGGGAGAAATTTGCGTGGCTGGCTCTCGAGTTTTAGTTCAAGAAGGAATCTACGACGAATTTGTGAAAAAAATAACTGAAAAGGCAAAATCTTGGGATGTGGGGGACCCTTTTGACCCTAATGTTAAATATGGACCCCAGGTGGATAAAAAGCAAATGGATAAGATTTTGAAATACATAGAAGATGGTAAAAGAGAGGGAGCAACATTGGTAACTGGGGGCAAGCGTATAGGAAATGTGGGCTATTACATTGAACCCACAATCTTTACAAATGTCAAGGAAGATTCACTAATTGCTCAAGACGAAATATTCGGACCGGTCCTCTCTGTCATTAAATTCAAGACAATTGAAGATGGAATCAGGAGTGCAAACAATACCAAGTATGGGCTAGCAGCTGGGATAGTGACTAATAGCTTAGACATAGCGAACACGGTGTCGAGGTCCATCCGAGCGGGTACGATTTGGATAAATTGTTACTTTGCTTTCGATCCAAGCTGCCCATTTGGAGGGTATAAGGAAAGTGGGTTCGGAAGAGACTCCGGAATGCATGCGATTAACAAGTATCTTCAAACTAAGTCTGTTGTGACTCCTTTGGTTAACACTCCTTGGCTTTGA 1524 45.41 MNQNNNHTHCNGKNSDSHLNIPQIKFTKLFINGQFVDSVSGKTFDTIDPRTEEVIATVAAGDKEDVDLAVKAAREAFDHGPWPRMSGAERGRIMTKLAGLIDEHKEELAALDTIDAGKLFLLGKIVDIPGAANTLRYYAGAADKFHGEVLKMAKPLHGYTLLEPIGVVGHIIPWNFPTTMFWLKVSPALAAGCTMIVKPAEQTPLSALFYAHLAKLAGIPDGVLNVVTGYGSTAGSSIANHMDVDKLSFTGSTKVGRLVMQAASASNLKQVSLELGGKSPLLIFNDADLQKAADLALLAIFYNKGEICVAGSRVLVQEGIYDEFVKKITEKAKSWDVGDPFDPNVKYGPQVDKKQMDKILKYIEDGKREGATLVTGGKRIGNVGYYIEPTIFTNVKEDSLIAQDEIFGPVLSVIKFKTIEDGIRSANNTKYGLAAGIVTNSLDIANTVSRSIRAGTIWINCYFAFDPSCPFGGYKESGFGRDSGMHAINKYLQTKSVVTPLVNTPWL* 508
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22294797 22297956 - Chy2G041790.1 Chy02g01912 221360

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01912 507 PANTHER DEHYDROGENASE, PUTATIVE-RELATED 12 507 - -
Chy02g01912 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 31 495 IPR016162 GO:0016491
Chy02g01912 507 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 277 466 IPR016163 GO:0016620
Chy02g01912 507 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 12 507 - -
Chy02g01912 507 SUPERFAMILY ALDH-like 21 503 IPR016161 GO:0016491
Chy02g01912 507 Pfam Aldehyde dehydrogenase family 35 497 IPR015590 GO:0016491
Chy02g01912 507 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 301 312 IPR016160 GO:0016491
Chy02g01912 507 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 273 280 IPR029510 GO:0016491
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01912 K12355 REF1; coniferyl-aldehyde dehydrogenase [EC:1.2.1.68] - csv:101219029 986.867
       

Dupl-types

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01912 Chy-Chr2:22294797 Chy02g02570 Chy-Chr2:28916466 0 dispersed
       

Syn-Families

Select Gene Event_type S_start S_end Function Ath_gene Identity(%) E-value Score
Chy02g01912 . 11 508 Aldehyde Dehydrogenase Gene Family AT3G24503 71.4 1.7e-211 732.3
Chy02g02570 . 64 549 Aldehyde Dehydrogenase Gene Family AT3G24503 54.6 6.5e-155 544.3
Chy02g02570 . 4 549 Aldehyde Dehydrogenase Gene Family AT3G48000 78.6 2.7e-255 877.9
Chy02g01912 . 23 508 Aldehyde Dehydrogenase Gene Family AT3G48000 55.6 3.8e-161 565.1
Chy02g02570 . 4 392 Aldehyde Dehydrogenase Gene Family AT1G23800 74.1 4.6e-167 584.3
Chy02g01912 . 23 351 Aldehyde Dehydrogenase Gene Family AT1G23800 54.4 6.8e-102 367.9
Chy07g00628 . 13 490 Aldehyde Dehydrogenase Gene Family AT4G34240 63.6 2.8e-180 628.6
Chy07g00627 . 3 494 Aldehyde Dehydrogenase Gene Family AT4G34240 61.6 6.7e-174 607.4
Chy07g00628 . 78 488 Aldehyde Dehydrogenase Gene Family AT1G44170 72.7 1.1e-179 626.3
Chy07g00627 . 72 492 Aldehyde Dehydrogenase Gene Family AT1G44170 68.6 3.2e-171 598.2
Chy05g00127 . 67 478 Aldehyde Dehydrogenase Gene Family AT1G44170 51.9 1.4e-118 423.3
Chy07g01274 . 61 475 Aldehyde Dehydrogenase Gene Family AT1G44170 50.1 3.6e-114 408.7
Chy07g01274 . 1 478 Aldehyde Dehydrogenase Gene Family AT4G36250 63.0 1.4e-183 639.4
Chy05g00127 . 2 480 Aldehyde Dehydrogenase Gene Family AT4G36250 56.6 1.4e-159 559.7
Chy11g01046 . 37 529 Aldehyde Dehydrogenase Gene Family AT1G79440 77.1 7.9e-228 786.6
Chy01g00197 . 12 502 Aldehyde Dehydrogenase Gene Family AT2G14170 81.7 5.2e-236 813.9
Chy02g00769 . 193 699 Aldehyde Dehydrogenase Gene Family AT2G14170 60.7 1.4e-177 619.8
Chy02g02550 . 71 571 Aldehyde Dehydrogenase Gene Family AT1G74920 80.6 2.4e-250 861.3
Chy02g02550 . 71 574 Aldehyde Dehydrogenase Gene Family AT3G48170 80.4 3.4e-252 867.5
Chy05g01239 . 1 496 Aldehyde Dehydrogenase Gene Family AT2G24270 90.9 2.6e-268 921.0
Chy12g01328 . 21 556 Aldehyde Dehydrogenase Gene Family AT5G62530 77.8 5.4e-259 890.2
Chy11g01565 . 1 600 Aldehyde Dehydrogenase Gene Family AT3G66658 74.3 1.9e-270 928.3
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0003336 2 1 7 5 4 1 2 1 1 1 1 1 2 1 1 2 1 3 1 1 1 1 1 1 1 1 1 2 1 0 49