Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g01942 ATGGCTGCAGTGTTTTACTTTACAACCCAGCTCCCATTTTCCCTAATTTCATTTCTCCTGCTGCTTCTTCTTCTTCTTCTTCGTTCTGTTCAATCTGAGCCCACCGCCGACAAGGCTGCTCTTCTTGATTTCTTGAACAAAACCCCTCATGAGAGTCGCCTTCAATGGAATGCTTCTGCCTCTGCCTGTAATTGGGTTGGAGTTTCCTGTGATGCGACTCGGTCCTTTGTTTTTTCTCTCCGGTTGCCTGGTGTGGGGCTTGTTGGTCCGATTCCGGCGAATACTATCGGCCGGTTGAATCGGCTTCGAGTTCTTAGTCTCCGATCGAATAGAATCTCTGGGGAGTTGCCGGCGGATTTTTCTAATTTGGGATTTCTTCGGAGTCTTTATCTGCAGGACAATGAGCTTTCTGGGAATTTTCCGGCGAGTGTGACTCAGTTGACTCGGCTGACTCGACTTGATCTTTCGTCCAATAACTTCTCTGGTCCGATTCCATTTTCGGTGAATAATTTGACGCATTTGAGTGGGCTTTTCTTAGAGAATAATGGGTTTTCAGGTTCTCTGCCGAGTATTCCTGCGGCTGCGACTAGTTTAACGGGATTCAATGTATCGAATAATAAGCTCAATGGATCCATTCCAGAAACCCTTTCGAAATTCAATGCTTCGTCTTTTGCCGGAAATTTAGCGCTCTGTGGTGGTCCATTGCCGTCATGCAGCCCGTTTTTTCCTTCCCCTGCTCCGTCGCCAACGTCCGCCGTGAAACCACCACAATTTCCCGTCGAGAAGAAGTCTAAAAAGCTCTCCATCGCTGCCATTGTCGGAATTGTGGTTGGCGCTGCTTTCGTTGCGTTTATATTACTGTTTTTGCTTCTGTTTTGTCTCCGGAAGCGCGAGCGGAGGCAGCCGGCGAAGCCTCCGAGTACGGTGGTTGCTGCTCGATCTGTTCCGGTTGAGGCAGGTACATCTTCGTCGAAAGACGACATCACCGGCGGATCAGTTGAGACGGAGAAAAACAGGTTAGTGTTCTTTGAAGGTGGGGTTTACAGCTTTGATTTGGAGGACTTGTTGAGGGCTTCGGCAGAGGTTTTAGGAAAAGGAAGCGTTGGAACGTCGTACAAGGCGGTGCTGGAAGAAGGAACCACCGTGGTGGTGAAGAGATTGAAAGATGTGGTGATGACGAAGAAGGAATTCGAAACGCAAATGGAAGCTCTGGGAAATGTTAAACATGAAAATGTGGTTCCTCTTAGAGCTTTCTACTTTTCCAGAGATGAGAAATTGCTTGTTTCCGATTACATGGCCGCCGGCAGCCTTTCTTCTTCCCTTCACGGAAGCAGAGGATCCGGCCGCACGCCACTAGATTGGGACAACCGGATGAAAATCGCATTAAGCGCAGCAAGAGGATTGGCTCACCTCCATCTGTCGGGAAAACTCGTCCACGGAAACATCAAATCATCGAACATCCTCCTACGCCCCAACCACGACGCTGCCGTCTCTGACTTCGGTTTGAACCCTCTCTTCGGCGCCTCAACGCCGCCCAACCGGATCGCTGGCTATCGCGCACCGGAGGTTGTTGAAACCCGAAAGGTTACTTTCAAGTCCGACGTGTACAGTTTTGGCGTGTTGCTGTTGGAGCTTCTCACCGGGAAATCACCGAATCAAGCGTCGTTGGGTGAAGAAGGGATTGATCTTCCTCGGTGGGTCCAGTCAGTGGTCCGAGAGGAATGGACGGCAGAGGTATTTGATGTGGAGTTAATGAGGTACCACAATATCGAAGAAGAGATGGTTCAACTTTTACAAATTGCCATGGCTTGCGTCGCCACGGTGCCTGAGCAGCGGCCGTCGATGCAGGAGGTGGTTCGAATGATTGAGGAATTGAACCGGGTGGAAACCGACGACGGGCTACGGCAGTCGTCCGATGACCCATCTAAAGGATCAGACGGTCAGACGCCGGCACAAGAGTCCAGCACCACCCCACCCGGAGCTGGCGGACCACCGTAG 1998 50.8 MAAVFYFTTQLPFSLISFLLLLLLLLLRSVQSEPTADKAALLDFLNKTPHESRLQWNASASACNWVGVSCDATRSFVFSLRLPGVGLVGPIPANTIGRLNRLRVLSLRSNRISGELPADFSNLGFLRSLYLQDNELSGNFPASVTQLTRLTRLDLSSNNFSGPIPFSVNNLTHLSGLFLENNGFSGSLPSIPAAATSLTGFNVSNNKLNGSIPETLSKFNASSFAGNLALCGGPLPSCSPFFPSPAPSPTSAVKPPQFPVEKKSKKLSIAAIVGIVVGAAFVAFILLFLLLFCLRKRERRQPAKPPSTVVAARSVPVEAGTSSSKDDITGGSVETEKNRLVFFEGGVYSFDLEDLLRASAEVLGKGSVGTSYKAVLEEGTTVVVKRLKDVVMTKKEFETQMEALGNVKHENVVPLRAFYFSRDEKLLVSDYMAAGSLSSSLHGSRGSGRTPLDWDNRMKIALSAARGLAHLHLSGKLVHGNIKSSNILLRPNHDAAVSDFGLNPLFGASTPPNRIAGYRAPEVVETRKVTFKSDVYSFGVLLLELLTGKSPNQASLGEEGIDLPRWVQSVVREEWTAEVFDVELMRYHNIEEEMVQLLQIAMACVATVPEQRPSMQEVVRMIEELNRVETDDGLRQSSDDPSKGSDGQTPAQESSTTPPGAGGPP* 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 22846973 22849361 + Chy2G042090.1 Chy02g01942 221390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g01942 665 MobiDBLite consensus disorder prediction 624 665 - -
Chy02g01942 665 Gene3D Ribonuclease Inhibitor 35 192 IPR032675 -
Chy02g01942 665 Pfam Protein kinase domain 360 620 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01942 665 Gene3D Transferase(Phosphotransferase) domain 1 432 643 - -
Chy02g01942 665 Gene3D Ribonuclease Inhibitor 193 241 IPR032675 -
Chy02g01942 665 MobiDBLite consensus disorder prediction 624 639 - -
Chy02g01942 665 SUPERFAMILY L domain-like 56 220 - -
Chy02g01942 665 Gene3D Phosphorylase Kinase; domain 1 325 431 - -
Chy02g01942 665 PANTHER RECEPTOR-LIKE KINASE 19 650 - -
Chy02g01942 665 PANTHER OS05G0588300 PROTEIN 19 650 - -
Chy02g01942 665 ProSiteProfiles Protein kinase domain profile. 357 625 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g01942 665 MobiDBLite consensus disorder prediction 640 658 - -
Chy02g01942 665 SUPERFAMILY Protein kinase-like (PK-like) 361 623 IPR011009 -
Chy02g01942 665 Pfam Leucine rich repeat N-terminal domain 36 71 IPR013210 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g01942 Chy05g01346 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01942 Chy-Chr2:22846973 Chy05g01346 Chy-Chr5:17569042 0 dispersed
Chy04g02286 Chy-Chr4:27406963 Chy02g01942 Chy-Chr2:22846973 1.53E-22 dispersed
Chy02g01942 Chy-Chr2:22846973 Chy06g01272 Chy-Chr6:11694990 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71083 PF00069 Pkinase 3.80E-37 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g01942 - - csv:101209965 1147.5