Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02002 ATGATGGGGTACATTTGGTGGAATTTAGTGGCAATTTTAGCAATGGTTTTGCCAGTGAAATCTCAGCTGAGTGTTGGATTTTATTCAAAGTCTTGTCCTAAAGCTGAGTTCATTGTTAGGTCTACTGTTGAGTCTTATTTCAAGGCTGATCCCACCATTGCTGCTGGCTTGCTCAGGCTTCACTTCCATGATTGTTTTGTTCAGGGATGCGATGGCTCAGTGTTGATAATGGATGAAAATGCTGAAATAAATGCAGGGCCAAACATGGGGTTAAGAGGATTTGAAGTCGTTGATGATGCAAAAGCAAAACTTGAAAATTTGTGTCCTGGTGTTGTTTCTTGTGCAGATATTCTTACTTTGGCTACTCGTGATGCCATAGACTTGAGTGATGGTCCAAGTTGGTCCGTGCCCACTGGAAGAAGAGACGGAAAAGTTTCGATCAGTTTCGATGCAGAAGATCTGCCTTCTCCATTCGAGCCCATCGATAACCACATACAAAAGTTTGCAGAGAAAGGCCTTACTGAAGAAGATCTTGTGACCTTAGTTGGTGCTCATACGATCGGGCGAACGGATTGCCAACTATTCAGTTACCGTCTACAAAACTTCACAAGCACAGGGAATCCAGATCCAACCATAAGCCCATCGTTCTTGACTGAACTGAGAAATCTTTGTCCTTTAGATGGAGATCCATTCAGAGGAGTGGCCATGGACAAAGACAGCCAATTGAAATTTGACAACAGCTTTTACAAGAACTTGATGGATGGAAATGGGGTTTTGGAGTCAGACCAAAGACTTTGGAGCCACCCTTCAACCAGAGACATTGTGAAAAGATATGGTGGAAACTTAAGGGGATTGTTGGGCCTTAGATTTAGCTATGAGTTCAAGAAAGCTATGGTTAAGTTGAGTAGCATTGGTGTTAAGACTGGCACACAAGGGGAGATTAGAAAAGTTTGTTATCAGTTCAATAAGTAG 972 42.39 MMGYIWWNLVAILAMVLPVKSQLSVGFYSKSCPKAEFIVRSTVESYFKADPTIAAGLLRLHFHDCFVQGCDGSVLIMDENAEINAGPNMGLRGFEVVDDAKAKLENLCPGVVSCADILTLATRDAIDLSDGPSWSVPTGRRDGKVSISFDAEDLPSPFEPIDNHIQKFAEKGLTEEDLVTLVGAHTIGRTDCQLFSYRLQNFTSTGNPDPTISPSFLTELRNLCPLDGDPFRGVAMDKDSQLKFDNSFYKNLMDGNGVLESDQRLWSHPSTRDIVKRYGGNLRGLLGLRFSYEFKKAMVKLSSIGVKTGTQGEIRKVCYQFNK* 324
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 23899758 23902357 - Chy2G042690.1 Chy02g02002 221450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02002 323 Gene3D Peroxidase, domain 2 155 301 - -
Chy02g02002 323 SUPERFAMILY Heme-dependent peroxidases 22 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 Gene3D - 26 322 - -
Chy02g02002 323 PRINTS Haem peroxidase superfamily signature 54 68 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Haem peroxidase superfamily signature 112 129 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Haem peroxidase superfamily signature 130 142 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Haem peroxidase superfamily signature 177 192 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Haem peroxidase superfamily signature 237 252 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 CDD secretory_peroxidase 22 318 IPR033905 GO:0004601|GO:0042744
Chy02g02002 323 ProSitePatterns Peroxidases active site signature. 54 65 IPR019794 GO:0004601
Chy02g02002 323 PANTHER PEROXIDASE 25-RELATED 7 320 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PANTHER PEROXIDASE 7 320 - -
Chy02g02002 323 PRINTS Plant peroxidase signature 235 250 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 111 121 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 32 51 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 130 145 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 296 309 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 251 268 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 92 105 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 176 188 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 PRINTS Plant peroxidase signature 56 76 IPR000823 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 ProSitePatterns Peroxidases proximal heme-ligand signature. 177 187 IPR019793 -
Chy02g02002 323 ProSiteProfiles Plant heme peroxidase family profile. 22 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Chy02g02002 323 Pfam Peroxidase 39 279 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g00264 Chy-Chr1:1843865 Chy02g02002 Chy-Chr2:23899758 2.04E-113 dispersed
Chy01g00265 Chy-Chr1:1846143 Chy02g02002 Chy-Chr2:23899758 8.42E-125 dispersed
Chy01g00287 Chy-Chr1:1999479 Chy02g02002 Chy-Chr2:23899758 4.44E-95 dispersed
Chy02g02002 Chy-Chr2:23899758 Chy05g00082 Chy-Chr5:583836 2.15E-94 dispersed
Chy02g02000 Chy-Chr2:23843437 Chy02g02002 Chy-Chr2:23899758 3.65E-111 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02002 K00430 - csv:101214998 646.736