Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02012 ATGAAGCGAATTACTAGAAAAGTTGGGAAGTATGAGGTGGGGAGGACCGTTGGGGAAGGGACGTTTGCCAAGGTTAAGTTTGCATGTAACACGGAGACGGGGGAGGGTGTGGCCATGAAAGTATTGGCCAAAAGTAGCATTCTCAAGCACAAAATGGTAGAACAGATTAAGAGGGAGATATCAATAATGAAAATTGTCAGGCATCCACATATTGTCCGACTGCATGAGGTGTTGGCTAGCCGGACAAAGATATATATTATTCTTGAGTTTGTCTCAGGAGGTGAACTATATGATAAAATAGTTCTTCAAAAGAAGCTCCCAGAAATTGAGTCTAGACGATACTTTCACCAGCTGATAGATGCAGTTGCTCATTGTCACAGCAAGGGTGTGTACCACAGGGACCTTAAGCCTGAAAACCTTCTTCTTGATGATGATGGAAATCTTAAAGTTTCCGACTTTGGACTGAGTGCACTGTCTCAAAAAGGTGTTGACCTACTTCACACCACATGTGGAACTCCTAATTATGTTGCACCCGAGGTGCTTGGTGGTCAGGGTTACGATGGTGCAGCTGCAGATATATGGTCATGTGGAGTCATCCTCTATGTACTAATGGCTGGATATCTTCCATTTTCAGAGACGGACCTTCCCACCCTAAACATGAAGATAAATGCAGCGGAGTATTCCTGTCCCTATTGGTTTTCACCTGGTGCAAAGTCCTTGATACAGAAGATCCTTGATCCAAATCCGAAAACTCGAATTCGAATTGAAGAAATTAGAAAAGATCCATGGTTCAGAAGAAACTACATCCCTGCTAAACTTGGAGAAGATGAGGAAGTAAACTTAGATGATGTTCGGGCTGTTTTTGATGACATTGAGGATGAATATGTAGCCGATCAATCAGAAAAAAGTGACGATGGTCCTTTGATAATGAATGCATTTGAGATGATAACATTATCTCAAGGATTAAATCTGTCACCATTATTTGATCGGCGACAGGACTATATAAAGCGGCAAACACGTTTTGTTTCTCGTAAACCTGCTAACTTTATAATGTCTAGCATTGAAGCAGTAGCAGAAGCAATGGGATTAAATTTCCACACACGTAATTTCAAGACAAGGTTGGAAAGAAGGACCGGATACAGGGTTGCACAGTTTGCCGCTGTGCTGGAGATTTATGAGGTGGCACCATCCCTTTTTATGGTGGACGTACGCAAAGCTGCTGGAGATACTCTAGAATATCACAAGTTCTACAAGAATTTCTGTGCTAAGCTAGAAAACATAATCTGGAAACCATCTGAGAGTGTGGGAAACTGA 1314 42.01 MKRITRKVGKYEVGRTVGEGTFAKVKFACNTETGEGVAMKVLAKSSILKHKMVEQIKREISIMKIVRHPHIVRLHEVLASRTKIYIILEFVSGGELYDKIVLQKKLPEIESRRYFHQLIDAVAHCHSKGVYHRDLKPENLLLDDDGNLKVSDFGLSALSQKGVDLLHTTCGTPNYVAPEVLGGQGYDGAAADIWSCGVILYVLMAGYLPFSETDLPTLNMKINAAEYSCPYWFSPGAKSLIQKILDPNPKTRIRIEEIRKDPWFRRNYIPAKLGEDEEVNLDDVRAVFDDIEDEYVADQSEKSDDGPLIMNAFEMITLSQGLNLSPLFDRRQDYIKRQTRFVSRKPANFIMSSIEAVAEAMGLNFHTRNFKTRLERRTGYRVAQFAAVLEIYEVAPSLFMVDVRKAAGDTLEYHKFYKNFCAKLENIIWKPSESVGN* 438
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24062118 24066567 - Chy2G042790.1 Chy02g02012 221460
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02012 437 Gene3D Transferase(Phosphotransferase) domain 1 91 272 - -
Chy02g02012 437 SUPERFAMILY Protein kinase-like (PK-like) 8 295 IPR011009 -
Chy02g02012 437 ProSiteProfiles NAF domain profile. 305 329 IPR018451 GO:0007165
Chy02g02012 437 Pfam Protein kinase domain 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02012 437 ProSiteProfiles Protein kinase domain profile. 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02012 437 SMART serkin_6 11 264 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02012 437 PANTHER NON-SPECIFIC SERINE/THREONINE PROTEIN KINASE 4 433 - -
Chy02g02012 437 PANTHER - 4 433 - -
Chy02g02012 437 Pfam NAF domain 307 364 IPR004041 GO:0007165
Chy02g02012 437 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Chy02g02012 437 Gene3D Kinase associated domain 1, KA1 304 430 - -
Chy02g02012 437 ProSitePatterns Protein kinases ATP-binding region signature. 17 49 IPR017441 GO:0005524
Chy02g02012 437 CDD CIPK_C 311 426 - -
Chy02g02012 437 Gene3D Phosphorylase Kinase; domain 1 1 90 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02012 Chy-Chr2:24062118 Chy03g01288 Chy-Chr3:15914927 0 dispersed
Chy02g02012 Chy-Chr2:24062118 Chy12g00355 Chy-Chr12:3797110 0 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71085 PF00069 Pkinase 6.60E-72 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02012 - - csv:101203676 862.062