Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02032 ATGGAGAAAAGGTGTGGTTGTTGGGGTGTTTTGACTCGTACTGTTTCTGGTGTTTGCAAATCCTCTGTTTCCAGAGACTCTCCAAATACCATTCCTCGAACTAGCCTAGTTTATGATTCTGCTACCGAAACACGGTATTTAAATGCTAGCAACAGGGATCTCTGTACCTTGAATGAAGCTGAGCTAGCCTCTGATAATGCCAATCCATCACAATCGGATAATAAAAAATCAAGCAAACTGCTTCAGTTCTCTTTTCATGAGCTCAAGGCAGCAACTGGAAACTTTAGACCTGATAGTATTCTTGGGGAAGGTGGATTCGGATATGTCTTTAAAGGATGGATTGAAGAGAATGGGACAGCCCCTGCAAAACCCGGATCAGGAATTACAGTAGCTGTTAAGAGCTTGAAACTTGATGGTCTTCAAGGCCACAGAGAATGGGTGGCTGAGGTTGCCTTTCTCGGACAACTTCACCATCCAAATCTTGTTAAGCTTATAGGTTACTGTAACGAAGATGATCAACGTTTGCTTGTTTACGAGTTTATGAGCCGTGGAAGTCTTGAGAACCATCTTTTCAGAAGGACTATTCCTCTTCCATGGTCCAATAGGATTAAGATTGCCCTTGGAGCGGCGAAGGGATTGGCCTTTCTTCATAGTGGCCCAGTACCTGTTATCTACAGAGATTTTAAGACATCCAATATATTGCTTGATTCGGATTACAATGCCAAGCTTTCTGATTTTGGTTTTGCAAAAGCTGGGCCTCAAGGAGACAAAACACATGTTTCTACCAGGGTAATTGGGACATATGGCTATGCTGCTCCTGAATATGTAATGACAGGACATCTGACATCGAAGAATGATGTTTATAGCTTTGGTGTTGTGCTTCTCGAGATTGTAACAGGGAGAAGATCCATGGACAAGAAACGTCCAAGCGGAGAACAAAACCTCGTCACATGGGCTCGACCATATTTAGCTGATAAAAGAAAGCTATATCAAATAGTAGATCCCCACTTGGAATTTAACTATTCCATTAAAGGTGTGCAGAAAGTCTCCCAGCTTGCTTGCAGTTGCCTCAGCAGGGACCCAAAACTACGTCCAACCATGGACGAAGTCGTGAAGATTCTGACTCCACTACAAGATCTCAACGACCTCGCCATCCTAACATCTCACTGCCGCTCATCTTCACAAGGGAGGCACAAGAAGAAACCCGAAGGACTAACCTACACCCAAAGCTTCAGAGCTTCTCCATTGAACACTGGAAAGCAGCATGTAAGGTGA 1275 43.76 MEKRCGCWGVLTRTVSGVCKSSVSRDSPNTIPRTSLVYDSATETRYLNASNRDLCTLNEAELASDNANPSQSDNKKSSKLLQFSFHELKAATGNFRPDSILGEGGFGYVFKGWIEENGTAPAKPGSGITVAVKSLKLDGLQGHREWVAEVAFLGQLHHPNLVKLIGYCNEDDQRLLVYEFMSRGSLENHLFRRTIPLPWSNRIKIALGAAKGLAFLHSGPVPVIYRDFKTSNILLDSDYNAKLSDFGFAKAGPQGDKTHVSTRVIGTYGYAAPEYVMTGHLTSKNDVYSFGVVLLEIVTGRRSMDKKRPSGEQNLVTWARPYLADKRKLYQIVDPHLEFNYSIKGVQKVSQLACSCLSRDPKLRPTMDEVVKILTPLQDLNDLAILTSHCRSSSQGRHKKKPEGLTYTQSFRASPLNTGKQHVR* 425
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 24341009 24344054 - Chy2G042990.1 Chy02g02032 221480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02032 424 PANTHER OS01G0588500 PROTEIN 55 392 - -
Chy02g02032 424 PANTHER OS01G0588500 PROTEIN-RELATED 55 392 - -
Chy02g02032 424 ProSiteProfiles Protein kinase domain profile. 95 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02032 424 ProSitePatterns Protein kinases ATP-binding region signature. 101 133 IPR017441 GO:0005524
Chy02g02032 424 ProSitePatterns Serine/Threonine protein kinases active-site signature. 223 235 IPR008271 GO:0004672|GO:0006468
Chy02g02032 424 MobiDBLite consensus disorder prediction 407 424 - -
Chy02g02032 424 SUPERFAMILY Protein kinase-like (PK-like) 78 386 IPR011009 -
Chy02g02032 424 Gene3D Transferase(Phosphotransferase) domain 1 181 391 - -
Chy02g02032 424 CDD STKc_IRAK 101 377 - -
Chy02g02032 424 Gene3D Phosphorylase Kinase; domain 1 69 180 - -
Chy02g02032 424 Pfam Protein kinase domain 98 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02032 424 MobiDBLite consensus disorder prediction 391 424 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02032 Chy05g01292 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02032 Chy-Chr2:24341009 Chy09g00267 Chy-Chr9:2226466 1.79E-177 dispersed
Chy04g02313 Chy-Chr4:27563303 Chy02g02032 Chy-Chr2:24341009 2.12E-62 dispersed
Chy08g00574 Chy-Chr8:13299164 Chy02g02032 Chy-Chr2:24341009 1.45E-64 dispersed
Chy10g00975 Chy-Chr10:15233074 Chy02g02032 Chy-Chr2:24341009 8.05E-132 dispersed
Chy04g01023 Chy-Chr4:15167067 Chy02g02032 Chy-Chr2:24341009 9.78E-73 transposed
Chy02g02032 Chy-Chr2:24341009 Chy05g01292 Chy-Chr5:17153188 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71086 PF00069 Pkinase 5.00E-46 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02032 - - csv:101203514 847.81