Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02099 ATGACTGTGGAGGGTCATTCTGTTGCTGTAGTCGGTGATGATGGGGCTACTGATCATTTTCCTGTTGGGATGCGTGTTCTTGCTGTTGACGACGACCCTATTTGTCTCAAAGTACTCGAATCTCTCCTCCGTAAATGCCAATATCATGTTACAACGACGAAGCAGTCCATTGAGGCTTTGAGGATGTTGAGAGAAAATAGGAACAAATTTGACTTGGTTATCAGTGATGTGAACATGCCTGATATGGATGGTTTCAAGCTTCTTGAGTTGGTGGGGCTTGAAATGGACCTACCTGTAATCATGTTATCAGCACATAGTGATACTGAGCTCGTTATGAAGGGGATTGCACACGGTGCTTGTGACTATCTATTGAAACCAGTTCGAATCGAGGAGTTGAAAAACATTTGGCAGCACGTGATTCGGAGAAAGAAGCTTGAACCGAAGGCGAAAAACAAGTTCCCTAGTCAAGATAAGGTTCGAAATGGAGGTAATGAAGTTGAACAAGGTTTCTCACCAACCAGTAATGCAGACAGTGCAAAATTCAACAGGAAACGGAAGGACCAAGATGATGATGATGACGACGAAGGAAAAGAGAATGGGCTTGATAGTGACGACCCCTCGAACCAGAAGAAGCCTAGGGTAGTATGGTCAGTTGAGTTGCATCGGAAGTTCGTTTCAGCAGTTAATCAGTTGGGTCTTGAAAAGGCCGTGCCAAAAAAAATCCTGGATCTGATGAATGTTGAAGGACTTACCCGAGAAAATGTGGCAAGTCATTTGCAGAAATATAGGCTTTATCTGAAAAGAATCAGCAATGTGGCATCCCAACAAGCTAACATGGTTGCTACATTTGGGAGCAAAGATGGCACTTACATGCGAATGGGTTCGCTTGATGGATATGGAGATTTACACGGCTTTGCAGGATCAGGGCGGCTTCCAAACTCCTCATTATCCTCTTATTCACCTGTTGGAATGCTTGGAAGATTGAACTCCCCGGCTGGAATGAGCATGCGTGGAATCACTTCATCTGGACTGATCCAGCAAAACTCCCAAAATTTGAACTGCGCCATTAATAACCTTGGCAAACTCCAACCAACTACAATGTTGTCTCCTAACCAAACTACTAATCTGCTGCAAGGAATTCCAACATCACTTGAGATCGGCCAATTGCAACACAGCAAGTCCACCACTTCCATTGGAGACTTCAATACAATGAATGAGACTTCCGGGTTTGGAGTTCCCAACTGTTTTCCTGAAACTAGAGCAAATATTGGAAATTCAACCTATTCGGTTTCTCCTGCCCCATTGATGTTACAAGGAACAATGCCAACATATGGAAATCAAACCTTCCTTAGAGTTGATCCGCTAAATGGAGAAACTTTTGACATAGACGTTGGTGGTTCAAATTTTTTGGATCCTGATCCTTCTAATGGAAACTGGCAGGGAGCAGCACATTTGTCTAGATTCTCAGCCACTTCATTAACCACCAATGAAGCTTATCCGAGTGATCAATTGCATTCAATGAACTCAGTCATTTCTTCTACCCCCTCGACGATTGGGAATATCTCGGTTGATTTTTCCTCTAGAAGTGCAGGTTCAGCTTCCTTACTAGATTCAAGAGACGTGCAATGCCAGGCAGGGGTAGTTGGCAGTGTTATTCAATCTATGAATACCTCGCCAAAGCAGAGTTGGGAAGAGCATAAACATGACTACAGTCGAAACGTGCAGCATAATCTTGGAGCAATCAATTCTCTGGTTTCTAGCGATGGGAATCCAACCCCCTTAAACCAGAGTTTCAATCAGAATGGTGTCGTACGTGATAGAAAGGTTGGTTCATCTTTAATAGTCCCATCAAATGTTGCGTCACTGTCCTTCCCTCAACATGGTGTGGTTGAAAAATTGGGTCCTAACACAAAGACGAATGTGGATGGAAACTACCTTTTGAATCAGATGAAGTCACACGATGGATCAATTCAAGGAAGTTTCGAGTCCTTGGATGATATAATGAATTCGATAATCAAACGGATTTCCAATGCTTCTTTCACATGGGAAAGTATGAAGGGAGCAACAATGGCAACACAGACAGTTTCTCCACATGTTGGTTTGAGTATAGCAGAGCCCAAATTGATCCTTCTTGGATACATGCATTCATCAAACCCAAAATTTGTGTCTTGA 2172 43.05 MTVEGHSVAVVGDDGATDHFPVGMRVLAVDDDPICLKVLESLLRKCQYHVTTTKQSIEALRMLRENRNKFDLVISDVNMPDMDGFKLLELVGLEMDLPVIMLSAHSDTELVMKGIAHGACDYLLKPVRIEELKNIWQHVIRRKKLEPKAKNKFPSQDKVRNGGNEVEQGFSPTSNADSAKFNRKRKDQDDDDDDEGKENGLDSDDPSNQKKPRVVWSVELHRKFVSAVNQLGLEKAVPKKILDLMNVEGLTRENVASHLQKYRLYLKRISNVASQQANMVATFGSKDGTYMRMGSLDGYGDLHGFAGSGRLPNSSLSSYSPVGMLGRLNSPAGMSMRGITSSGLIQQNSQNLNCAINNLGKLQPTTMLSPNQTTNLLQGIPTSLEIGQLQHSKSTTSIGDFNTMNETSGFGVPNCFPETRANIGNSTYSVSPAPLMLQGTMPTYGNQTFLRVDPLNGETFDIDVGGSNFLDPDPSNGNWQGAAHLSRFSATSLTTNEAYPSDQLHSMNSVISSTPSTIGNISVDFSSRSAGSASLLDSRDVQCQAGVVGSVIQSMNTSPKQSWEEHKHDYSRNVQHNLGAINSLVSSDGNPTPLNQSFNQNGVVRDRKVGSSLIVPSNVASLSFPQHGVVEKLGPNTKTNVDGNYLLNQMKSHDGSIQGSFESLDDIMNSIIKRISNASFTWESMKGATMATQTVSPHVGLSIAEPKLILLGYMHSSNPKFVS* 724
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25279827 25310114 + Chy2G043660.1 Chy02g02099 221547
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02099 723 SUPERFAMILY Homeodomain-like 209 268 IPR009057 -
Chy02g02099 723 Pfam Response regulator receiver domain 26 134 IPR001789 GO:0000160
Chy02g02099 723 TIGRFAM myb_SHAQKYF: myb-like DNA-binding domain, SHAQKYF class 211 264 IPR006447 GO:0003677
Chy02g02099 723 PIRSF RR_ARR_type-B 1 685 IPR017053 GO:0003677|GO:0003700|GO:0009736
Chy02g02099 723 ProSiteProfiles Response regulatory domain profile. 25 140 IPR001789 GO:0000160
Chy02g02099 723 SUPERFAMILY CheY-like 23 148 IPR011006 -
Chy02g02099 723 SMART REC_2 24 136 IPR001789 GO:0000160
Chy02g02099 723 MobiDBLite consensus disorder prediction 147 210 - -
Chy02g02099 723 Pfam Myb-like DNA-binding domain 213 263 IPR001005 -
Chy02g02099 723 Gene3D - 24 181 - -
Chy02g02099 723 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 678 IPR045279 GO:0009736
Chy02g02099 723 PANTHER TWO-COMPONENT RESPONSE REGULATOR 1 678 - -
Chy02g02099 723 CDD REC_typeB_ARR-like 26 140 - -
Chy02g02099 723 MobiDBLite consensus disorder prediction 157 178 - -
Chy02g02099 723 Gene3D - 207 270 - -
Chy02g02099 723 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 208 267 IPR017930 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01728 Chy-Chr1:23050186 Chy02g02099 Chy-Chr2:25279827 2.85E-09 dispersed
Chy02g02099 Chy-Chr2:25279827 Chy11g01546 Chy-Chr11:22011151 5.32E-108 dispersed
Chy09g00884 Chy-Chr9:11623430 Chy02g02099 Chy-Chr2:25279827 1.22E-08 dispersed
Chy11g01210 Chy-Chr11:18279051 Chy02g02099 Chy-Chr2:25279827 5.28E-22 dispersed
Chy08g00806 Chy-Chr8:15638507 Chy02g02099 Chy-Chr2:25279827 5.81E-23 transposed
Chy12g01526 Chy-Chr12:19020856 Chy02g02099 Chy-Chr2:25279827 3.05E-18 transposed
Chy09g01472 Chy-Chr9:16142628 Chy02g02099 Chy-Chr2:25279827 1.81E-23 transposed
Chy02g02099 Chy-Chr2:25279827 Chy05g01262 Chy-Chr5:16978136 0 wgd
Chy02g02099 Chy-Chr2:25279827 Chy07g00343 Chy-Chr7:2803571 1.76E-169 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17570 PF00072 Response_reg 2.80E-25 CL0304 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02099 K14491 - csv:101213687 1304.27