Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Chy02g02124 | ATGGCGGAGCCCGAAAGCTTTGGAACTCACCAACTCGGGAGCTCCAAGGCGGCTACTGAAGGCCAGGAAGATGATGAAGAAGAAATGGACGATTCGGATGATGAATCAGAGGTGGACTTGGGAGGAGAAGGAGGAGGAACAGGGAGTGAGTTCAAACCGACTGAGTTGAGAACCGGTTCGTCGGTTAATGAAGCTGTGGTGACGGGTTCACTTTCTGAAACCCTAACGGTGGCTTCGTCCGCTGAAAACGGTCGGTCTGATGGTTTGCAGCCTGACGAAGGAGCTGAATTGAAGCAAGCTCCGTCTTCCCACAGTGAGCCTTTGGCTGTTGAAGCAACCCAGACAGATAAGGTGCAAGAACAAAACCATCTTCAGTTGACAATATTTAAAGGGCCTGATTCGGACCAATCACCAACTTCAGTTACCCAGTCTATCTCATCCTACGCAAGTTCAAATTTATCTGAACATAAGCTGTCACCTAAGAGGGTCCAGAAAATATGTAAGCCAGAGCCAAGCCAGAAAAATTTCTTCAACCATAAAACTCCATCATCTGTTCCCAATGCAAGGACACCTGCTTCAGATGGTTACAATTGGAGAAAATACGGTCAGAAGCAAGTGAAGAGTCCTAAGGGTTCACGTAGCTATTACAAGTGTACGTATTCTGAATGCTTTGCTAAGAAGATTGAATGTTGTGATGACTCAGGGGAAACAACAGAGATTGTTTACAAGAGTCAACATAGCCACGATCCACCTAGGAAGATTAGTACACCAAAGGAAAGTAAGCTTGTGCCCTATGTTGAGCCTGTGGTTAAAAAAATCATTGCTGAGCATTCCAGAAGAGTAATTAATGATTCAGATTCTCCCACACCTTCAAAAGAACCGTTACGAGAAACAGCTATAGTCGTCTTTGAAAGGAAACGACAGCACTCAAATGACTCTAATGGAAATGATGAATTTAAAATCAAAGATGAGAATGACGATGAACCTGGGACAAAACAAATAGTTAAAAAAAGCATTGCGGGAAACTCAGGCACTCCCCTAAAACCTGGAAAGAAACCCAAATTTGTGGTGCATGCTGCAGGTGATGTTGGAATCTCGGGTGACGGATACAGATGGCGCAAGTATGGTCAGAAAATGGTGAAAGGAAACCCTCATCCTAGGAACTACTACCGATGTACTTCTGCTGGGTGTCCAGTCCGTAAGCATATCGAATCAGCAGTAGAAAATCCAAATGCAGTAATAATAACATACAAGGGAGTTCATGATCACGACACGCCTGTACCAAAGAAACGACACGGTCCACCAAGTGCTCTTCTTGTAGCTGCTGCAGCACCAGCCTCCATGAGCAGCAATACACAACCGAAGAAAACTGATGTGGTCGAGTCCCAAATATCTTCAACACAGTGGTCTGTGGATGCTGAAGGAGAGTTGACTGGTGAGGCCTTGGAGCTTGGGGGTGAGAAGGCAATGGAATCTGCTCGAACACTTTTGAGCATTGGATTTGAAATCAAACCTTGCTGA | 1521 | 45.17 | MAEPESFGTHQLGSSKAATEGQEDDEEEMDDSDDESEVDLGGEGGGTGSEFKPTELRTGSSVNEAVVTGSLSETLTVASSAENGRSDGLQPDEGAELKQAPSSHSEPLAVEATQTDKVQEQNHLQLTIFKGPDSDQSPTSVTQSISSYASSNLSEHKLSPKRVQKICKPEPSQKNFFNHKTPSSVPNARTPASDGYNWRKYGQKQVKSPKGSRSYYKCTYSECFAKKIECCDDSGETTEIVYKSQHSHDPPRKISTPKESKLVPYVEPVVKKIIAEHSRRVINDSDSPTPSKEPLRETAIVVFERKRQHSNDSNGNDEFKIKDENDDEPGTKQIVKKSIAGNSGTPLKPGKKPKFVVHAAGDVGISGDGYRWRKYGQKMVKGNPHPRNYYRCTSAGCPVRKHIESAVENPNAVIITYKGVHDHDTPVPKKRHGPPSALLVAAAAPASMSSNTQPKKTDVVESQISSTQWSVDAEGELTGEALELGGEKAMESARTLLSIGFEIKPC* | 507 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 2 | 25534349 | 25537549 | + | Chy2G043910.1 | Chy02g02124 | 221572 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 174 | 191 | - | - | |
| Chy02g02124 | 506 | Gene3D | WRKY domain | 180 | 252 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | Gene3D | WRKY domain | 351 | 427 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 21 | 40 | - | - | |
| Chy02g02124 | 506 | SUPERFAMILY | WRKY DNA-binding domain | 362 | 426 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | ProSiteProfiles | WRKY domain profile. | 361 | 426 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 304 | 353 | - | - | |
| Chy02g02124 | 506 | Pfam | WRKY DNA -binding domain | 194 | 248 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | Pfam | WRKY DNA -binding domain | 368 | 423 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | ProSiteProfiles | WRKY domain profile. | 187 | 251 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | SUPERFAMILY | WRKY DNA-binding domain | 190 | 251 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 1 | 213 | - | - | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 304 | 333 | - | - | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 106 | 157 | - | - | |
| Chy02g02124 | 506 | PANTHER | WRKY TRANSCRIPTION FACTOR 32-RELATED | 20 | 504 | - | - | |
| Chy02g02124 | 506 | SMART | WRKY_cls | 366 | 425 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | SMART | WRKY_cls | 192 | 250 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
| Chy02g02124 | 506 | PANTHER | WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED | 20 | 504 | IPR044810 | GO:0003700 | |
| Chy02g02124 | 506 | MobiDBLite | consensus disorder prediction | 53 | 86 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Chy02g02124 | Chy-Chr2:25534349 | Chy06g01876 | Chy-Chr6:22629322 | 1.22E-14 | dispersed | |
| Chy02g02124 | Chy-Chr2:25534349 | Chy09g00217 | Chy-Chr9:1819693 | 2.44E-15 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 17573 | PF03106 | WRKY | 6.50E-24 | CL0274 | Chy | TF |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Chy02g02124 | - | - | csv:101209954 | 931.784 |