Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02139 ATGCAGAAAGGTGATCAAACTGTTCTAAGCTTGAGACCTGGTGGCGGTCGTCCTAGACTCCTTGGTCCTCGCTTTGACCTTTCATCTTCATCTTCTTCTTCATCCTCTTCATCTTCTTTTGCTTTCGGTTCTTTTTCCGCTGATCTCCCTACCCTTCGTCCCCATGCCGCTTCCGCTTCTTCCGCTTCTTTTTCTGTAAAGGGTGGAGATTCACGGTTTGAGGGTCGTGAGCGTGTTCGATATACCCGAGATCAGCTTTTGCAGCTTCGGGAGGGTGTAGAAGTTCCAGATGATATACTAAAACTTAAACGGGAAATTGAAGTGGAAATTTTTGGCGAGGAACAAAGTTGGAGTCGTGGAGAGAGCAATCAACTCAATCAGTCTCAGAATCGGTATTCTGAGCCTGACAATCGTGACTGGCGTGGGCGCTCTGCCCAATTCTCTCCTTCCGGTGAGGAGAGGTCCAGGGAAACGAATCGAGACAGAGATTTTGGTGGTCATTTTGACTCTAGACAGCAAGATGCGAATAACTTGAATCGTCAAGATTCTCACTCATCTTGGACCCGAACCACTTCTAACCAAGGGGGAGCACCTCCTACATTAATCAAAGCTGAGGTACCATGGTCAGTTAGGAGAGGAAATCTCTCTGATAAGGATCGTGTCTTGAAGACTGTAAAGGGGATATTGAACAAGTTAACACCAGAAAAGTTTGATCTCCTCAAGGGTCAGTTAATTGACTCTGGAATCACCTCCGCTGATATTTTGAAGGATGTCATTTCACTCATTTTTGACAAGGCTGTTCTTGAGCCCACATTTTGCCCCATGTATGCACAATTGTGTTCTGATCTGAACCAGAAGCTACCTCAATTTCCCTCTGATGAACCGGGTGGTAGGGAAATTACTTTTAAACGAGTCCTCTTAAATATCTGTCAGGAGGCTTTTGAAGGTGCAGACAAGTTGAGGGAAGAGGTTAGGCAGATGACTGCCCCTGAACAAGAGGGTGAGCGCAGAGATAAAGACAGACTTGTGAAACTTCGTACTCTTGGAAATATTCGATTGATTGGAGAGCTTCTAAAGCAAAAGATGGTGCCTGAGAAGATTGTCCACCACATTGTCCAGGAACTTTTAGGACCAGATAACAAAACCTGTCCTGCCGAAGAAAATGTCGAGGCAATCTGTCAATTCTTTAACACCATAGGTAAGCAGCTAGATGAGAGCACTAAATCGCGCCGTATTAATGACATGTACTTTGGCCGATTGAAAGAATTGACCACACACACTCAGTTGGCCCCACGATTGAAATTCATGGTCCGTGATGTTCTTGATTTGCGTGCTAACAATTGGGTTCCTAGGCGTGAGGAGGTTAAAGCCAAAACTATAACTGAAATACATTCAGAGGCAGAAAAAAATCTGGGACTACGCCCTGGTGCTACTGTTAATATCAGAAATAGTCGTGTTGCGTCTGGTTCTGCCGGCAACACTAGCCCTGGAGGCTTTCCTATCAATCGTCCTGGTTTTGGGGGCATGATGCCTGGGATGCCTGGAACGAGGAAGATGCCTGGTATGCCAGGTATGGATAATGACAATTGGGAGGTACCTAGGGCTCGTTCTATAACAAGAGGGGCAGACGGATCTGGTATCCAGTATGCTGGACGTGGTCAACCGTTGGTTGGCAAAGCACCAACATTAAATGCAAGGCTACTGCCCCAGGGTACCGGTGGGCTCATTAATAATAAGACTAGTGCTCTATTGCAAGGTCAGGGTGCAGGTGGATCTACTGCTCGTCCTGTTAACTTTGGGCATGGATTAGAGCCTGCTGGTCAGGTTCATAAACCTATTACAGCAGCAACAGTCACTCCACTGGCCGAGAGACCACAGGCTCCAGTCGCATCTTTAAAACAAGATGATCTCAAAAAGAAAACTCTCTCCCTTCTTGAAGAATATTTCAGTATCCGGCTTTTGGATGAAGCTTTACAGTGTGTGGAAGAACTCATGTCACCGACTTACCACCCTGAGGTAGTAAAAGAAGCCATTTCCTTAGCTCTAGAGAAAAGCCCACCCTGTGTTGAAGCAGTTGTAAAGTTTCTTGACTATTTATTCTCCAAGAAGGTCTTTACAACCAGTGACATTGAAACTGGATGTTTGGGATATGCGTCTATGCTCCATGACGCAGGTATTGATTTGCCAAAAGCGCCCATCAATTTTGGTGACATAATTGGGAAACTTGTTCTATCCCGGTGTTTAGATTTTCAGGTGGTGAAAGAAGCCATTAAGAAGGTGGAAGATGACAGGTTCAGGAAAGATGTATTTGATGCTGTCATGCAAACTATCAGCTCTAATGTGTCTGGGCGAGGATTATTGGATTCATTGGCATCTGATATCGAGGACTGTCGAAGTGGCTACAAAGAACAGTTCGAGGAAATGAATGAACCTTTGATTGATCTCTTGGGATTTAAGTGCTCTTTCATATCGGATCATTGGAGGTTTAAACCTGAACGCGTGGAAGTAGTGGACGAAGCTATGGCTTTTCCACTTCCATTTCCATCATTAAAATACAAGTCAAATTGA 2568 45.05 MQKGDQTVLSLRPGGGRPRLLGPRFDLSSSSSSSSSSSSFAFGSFSADLPTLRPHAASASSASFSVKGGDSRFEGRERVRYTRDQLLQLREGVEVPDDILKLKREIEVEIFGEEQSWSRGESNQLNQSQNRYSEPDNRDWRGRSAQFSPSGEERSRETNRDRDFGGHFDSRQQDANNLNRQDSHSSWTRTTSNQGGAPPTLIKAEVPWSVRRGNLSDKDRVLKTVKGILNKLTPEKFDLLKGQLIDSGITSADILKDVISLIFDKAVLEPTFCPMYAQLCSDLNQKLPQFPSDEPGGREITFKRVLLNICQEAFEGADKLREEVRQMTAPEQEGERRDKDRLVKLRTLGNIRLIGELLKQKMVPEKIVHHIVQELLGPDNKTCPAEENVEAICQFFNTIGKQLDESTKSRRINDMYFGRLKELTTHTQLAPRLKFMVRDVLDLRANNWVPRREEVKAKTITEIHSEAEKNLGLRPGATVNIRNSRVASGSAGNTSPGGFPINRPGFGGMMPGMPGTRKMPGMPGMDNDNWEVPRARSITRGADGSGIQYAGRGQPLVGKAPTLNARLLPQGTGGLINNKTSALLQGQGAGGSTARPVNFGHGLEPAGQVHKPITAATVTPLAERPQAPVASLKQDDLKKKTLSLLEEYFSIRLLDEALQCVEELMSPTYHPEVVKEAISLALEKSPPCVEAVVKFLDYLFSKKVFTTSDIETGCLGYASMLHDAGIDLPKAPINFGDIIGKLVLSRCLDFQVVKEAIKKVEDDRFRKDVFDAVMQTISSNVSGRGLLDSLASDIEDCRSGYKEQFEEMNEPLIDLLGFKCSFISDHWRFKPERVEVVDEAMAFPLPFPSLKYKSN* 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25616123 25622748 - Chy2G044060.1 Chy02g02139 221587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02139 855 Pfam MIF4G domain 222 447 IPR003890 GO:0003723|GO:0005515
Chy02g02139 855 ProSiteProfiles MI domain profile. 636 758 IPR003891 -
Chy02g02139 855 MobiDBLite consensus disorder prediction 485 505 - -
Chy02g02139 855 MobiDBLite consensus disorder prediction 115 204 - -
Chy02g02139 855 Gene3D - 630 809 - -
Chy02g02139 855 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4 GAMMA 3 799 IPR045208 GO:0003743
Chy02g02139 855 Pfam MA3 domain 637 749 IPR003891 -
Chy02g02139 855 PANTHER MIF4G DOMAIN-CONTAINING PROTEIN / MA3 DOMAIN-CONTAINING PROTEIN ISOFORM 2 3 799 - -
Chy02g02139 855 SMART if4_15 222 447 IPR003890 GO:0003723|GO:0005515
Chy02g02139 855 SUPERFAMILY ARM repeat 632 810 IPR016024 -
Chy02g02139 855 MobiDBLite consensus disorder prediction 170 198 - -
Chy02g02139 855 MobiDBLite consensus disorder prediction 1 41 - -
Chy02g02139 855 MobiDBLite consensus disorder prediction 116 133 - -
Chy02g02139 855 SUPERFAMILY ARM repeat 215 450 IPR016024 -
Chy02g02139 855 MobiDBLite consensus disorder prediction 25 41 - -
Chy02g02139 855 SMART ma3_7 637 749 IPR003891 -
Chy02g02139 855 MobiDBLite consensus disorder prediction 153 169 - -
Chy02g02139 855 Gene3D - 213 448 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02139 Chy-Chr2:25616123 Chy12g01209 Chy-Chr12:16821631 4.42E-07 dispersed
Chy05g00618 Chy-Chr5:7518871 Chy02g02139 Chy-Chr2:25616123 2.07E-63 transposed
Chy06g00325 Chy-Chr6:2174487 Chy02g02139 Chy-Chr2:25616123 3.63E-62 transposed
Chy02g02139 Chy-Chr2:25616123 Chy07g00318 Chy-Chr7:2604723 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02139 K03260 - csv:101207520 1506.12