Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02151 ATGACGAAATCCACAGCGCAACAGGTTCAGATTAGGGAATCGAATGGGAATAATGTTGTAATGAAGACTAAAACGAAGCGAACTCGGAGGAGTGTTCCGAGAGATTCTCCGCCTCAACGGAGCTCCATTTATCGCGGCGTTACTAGGCATCGTTGGACGGGGAGATATGAAGCCCATTTGTGGGATAAGAATTGCTGGAATGAATCGCAGAACAAGAAAGGAAGACAAGGTGCATACGATGACGAGGAAGCAGCAGCCCACGCTTACGACCTTGCAGCACTAAAATACTGGGGCCAAGAAACCATTCTTAATTTTCCGCTAACTACGTACCAAAAAGAGCTGAAGGAAATGGAGGGCCAATCAAGAGAAGAATATATCGGGTCGTTGAGAAGAAAAAGCAGTGGGTTTTCTCGGGGGGTTTCTAAATACAGAGGCGTTGCTAGACACCATCACAATGGTAGATGGGAAGCTCGGATTGGCAGGGTGTTTGGCAACAAGTATCTCTATCTTGGAACATATGCGACGCAAGAAGAAGCAGCTACGGCGTACGATATCGCAGCCATAGAATACCGTGGACTTAACGCCGTTACCAATTTCGACCTAAGCCGTTACATCAAATGGCTAAAACCAAGCAACGACGTCGTTTACGACAACAACCGCACCCTAACCGTCGATTCCATCCTCCCAAGCCCTAAGCAAGAACTCGACCTAGGCCTCTTCCCACCGGACCAAAACCAAAGCAGCACCGATTCAGCGACGCCTGAACCAATCGCCTTACCGCCGTCGCGCCGATCGACCACCTCCACCTCCACCACCACGTCAGCTCTCGGCCTCCTCCTCCAATCCTCCAAGTTCAAGGAAATGATGGAGATGAGCTCAGCAGCGGAGTGTCCTTCGACGCCGTCGTCATCGGAGCAGCTCGAACGGCGGCGGTGTTTGTTTCCCGACGACGTTCAGACTTTCTTTGCGTGTGAGACATCGGGCTCTTACTGCTATGGAGAAGCGGATGATGCAATGTTTAGCGACTTCAATTCTTTCGTTCCGCCGCCGCTATCGCATTACGATTTCGCCGATTAG 1077 50.7 MTKSTAQQVQIRESNGNNVVMKTKTKRTRRSVPRDSPPQRSSIYRGVTRHRWTGRYEAHLWDKNCWNESQNKKGRQGAYDDEEAAAHAYDLAALKYWGQETILNFPLTTYQKELKEMEGQSREEYIGSLRRKSSGFSRGVSKYRGVARHHHNGRWEARIGRVFGNKYLYLGTYATQEEAATAYDIAAIEYRGLNAVTNFDLSRYIKWLKPSNDVVYDNNRTLTVDSILPSPKQELDLGLFPPDQNQSSTDSATPEPIALPPSRRSTTSTSTTTSALGLLLQSSKFKEMMEMSSAAECPSTPSSSEQLERRRCLFPDDVQTFFACETSGSYCYGEADDAMFSDFNSFVPPPLSHYDFAD* 359
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25737097 25740258 + Chy2G044180.1 Chy02g02151 221599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02151 358 MobiDBLite consensus disorder prediction 23 43 - -
Chy02g02151 358 Gene3D AP2/ERF domain 43 108 IPR036955 GO:0003700|GO:0006355
Chy02g02151 358 Gene3D AP2/ERF domain 141 202 IPR036955 GO:0003700|GO:0006355
Chy02g02151 358 Pfam AP2 domain 43 98 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 Pfam AP2 domain 141 192 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 ProSiteProfiles AP2/ERF domain profile. 43 106 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 PANTHER AP2-LIKE ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR 1 337 - -
Chy02g02151 358 CDD AP2 141 202 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 SMART rav1_2 43 112 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 SMART rav1_2 142 206 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 ProSiteProfiles AP2/ERF domain profile. 142 200 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 SUPERFAMILY DNA-binding domain 141 202 IPR016177 GO:0003677
Chy02g02151 358 MobiDBLite consensus disorder prediction 235 273 - -
Chy02g02151 358 SUPERFAMILY DNA-binding domain 42 107 IPR016177 GO:0003677
Chy02g02151 358 PRINTS Ethylene responsive element binding protein signature 182 202 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 PRINTS Ethylene responsive element binding protein signature 44 55 IPR001471 GO:0003700|GO:0006355
Chy02g02151 358 MobiDBLite consensus disorder prediction 240 273 - -
Chy02g02151 358 PANTHER AP2 DOMAIN-CONTAINING TRANSCRIPTION FACTOR 1 337 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01930 Chy-Chr1:24516874 Chy02g02151 Chy-Chr2:25737097 2.97E-138 dispersed
Chy02g02151 Chy-Chr2:25737097 Chy02g00817 Chy-Chr2:5154355 5.72E-10 dispersed
Chy04g01521 Chy-Chr4:21792154 Chy02g02151 Chy-Chr2:25737097 2.75E-14 dispersed
Chy02g02151 Chy-Chr2:25737097 Chy03g00967 Chy-Chr3:13208870 2.77E-104 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17574 PF00847 AP2 3.50E-09 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02151 K09285 - csv:101219103 676.396