Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02176 ATGGGCATGGAATTGAAGAAGGAAAAGCTTGTTAGGTTTTATTCTGATCACAAAAAACATAAGAAATCCGCCATTGGAAGCAGCAATGAAGCAGTGCAACTTGAGAAGTCACCGTCAAAATACTATATTCCCTCGTCAACGTCAACATTCTTAATACCTGAGAATGGACTAGGAGGAGGCAAATGTAAATTGATCGAAACTTTTAAAACGGAGAAGTCTAAGGTGTTTCCAGAGGACCATGAACCATGGAGCAAAAGAATACTAGACCCTGGTAGCAAAATTGTTTTGAAATGGAACCGGGTGTTCATTTGCTCGTGCTTATTGGCTCTCTTTGTTGACCCGCTATATCTTTACTTGCCTGCTTTGAATGGGAATGGGGTATCCCAATGTGTAAGGACAGACTGGAAATTGCGAATTGTTGTGACCTGTTTCCGAACAGTTGCAGATTTTTTCTACCTTTTGCACATGATTATAAAGTTCAGAACAGCTTATGTTGCTCCTAGCTCTCGTGTTTTTGGGAGAGGTGAGCTTGTGATGGATCCAAAGATGATAGCAAAGAGGTATATTAGATCTGATTTTTTTGTCGATCTAATTGCCACCCTCCCTCTCCCTCAGTTTGTCATCTGGTTCATCATACCTGCAACAAGAAGTCGTCTAACTGATCATAAAAACAATGCACTTGCACTTATTGTTCTTCTTCAATATATTCCAAGATTGTATTTGATTTTCCCACTAAGTTCAGAAATCATCAAAGCAAATGGTGTTGTTACAAAAACAGCATGGGCAGGAGCTGCTTATAATCTTCTACTTTATATGTTGGCCAGCCATGTTCTAGGTGCTACATGGTATTTGCTGTCAGTTGATAGATATACTTCGTGCTGGAAGTCATTTTGTAGGAAGAAGGAATATAATCCTCTAGAGTGCAATCTAACGTTTTTTGATTGTGATACATTTAACAGTAATGATCGCAAAACATGGGCAAACAGTACACTTGTTTTTGGAAAATGTGGCACTGATGGAGGAGACTTCAAGTATGGCATTTTTGAGAATGCAATGTCGAAGAATGTTGTCTCTTCAAACTTTATTGAAAAGTACTTCTATTGTTTATGGTGGGGCTTGCAAAACTTGAG 1130 38.85 MGMELKKEKLVRFYSDHKKHKKSAIGSSNEAVQLEKSPSKYYIPSSTSTFLIPENGLGGGKCKLIETFKTEKSKVFPEDHEPWSKRILDPGSKIVLKWNRVFICSCLLALFVDPLYLYLPALNGNGVSQCVRTDWKLRIVVTCFRTVADFFYLLHMIIKFRTAYVAPSSRVFGRGELVMDPKMIAKRYIRSDFFVDLIATLPLPQFVIWFIIPATRSRLTDHKNNALALIVLLQYIPRLYLIFPLSSEIIKANGVVTKTAWAGAAYNLLLYMLASHVLGATWYLLSVDRYTSCWKSFCRKKEYNPLECNLTFFDCDTFNSNDRKTWANSTLVFGKCGTDGGDFKYGIFENAMSKNVVSSNFIEKYFYCLWWGLQNLX 377
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 25975510 25978594 + Chy2G044430.1 Chy02g02176 221624
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02176 377 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 63 376 - -
Chy02g02176 377 Pfam Ion transport protein 98 376 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Chy02g02176 377 SUPERFAMILY Voltage-gated potassium channels 90 375 - -
Chy02g02176 377 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 14-RELATED 63 376 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02176 Chy-Chr2:25975510 Chy04g00288 Chy-Chr4:2602983 5.71E-130 dispersed
Chy02g02176 Chy-Chr2:25975510 Chy04g01471 Chy-Chr4:21377399 5.35E-125 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02176 K05391 - csv:101218643 770.385