Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02191 ATGGGAATTGACGGTGCCACTATTGTTAATGGTTTCCGCGGCAGACCCTGCGGTTTCTGCAAGACTGACCCTGCCGCCGTCTATTGCCGACCTGACTCTGCTTTTCTCTGTCTCTCCTGCGACGCCAAAATTCACTGCGCCAACAAACTCGCCTCTCGCCATGACCGCGTCTGGATGTGCGAGGTTTGTGAACAAGCTCCTGCTGTGGTCACGTGCAAAGCTGATGCTGCGGCTCTTTGTGTCACTTGCGATGCCGATATTCACTCTGCTAACCCACTGGCCAGCCGCCACGTGCGTTTCCCCGTCGAGCCTTTCTTCGACACCGCCGAATCTGTCGTTAAATCCTCTTCTGTTTTGAATTTTCTAGTCCCTGATGAAACTAATGTCTGCGACGGTGCCCATCACCATGAGGAGGTGGAGGTTGCTTCCTGGCTTTTATGCAACTCGTCTTTCAACTCTAAGCTCGTCCACGGCCCTGAAATCAAACCCCAGCTTGGAAATGATCATTTGTTCTTCACTGAAATGGATTCTTTTATTGATTTTGAATGCCCCAATTCAGTTAACGATGATCACAACGATATTAAAGACAGCATCGTCCCTGTCCAGACGAAGCCAGACCCAACGCTGGTTATTAACCATACCCACTCCCCTGAAAATTGCTATGACATTGATTTTTGTAGATCCAAGCTCAATTCATTCGGATATCAACCTCAATCACTGAGCCACAGTGTTTCCTCTTCCTCCTTAGATGTCGGAGTTGTTCCACAAGCAAATTCGATGTCTGAGACATCGTACCCAATGGGAGGACAAACTGCGGATTCGGGGCTCCCGTTGTCAGGATCCGGAAACCAAGCGACACAATTGTGTGGAATGGATCGAGAAGCGAGAGTGTTGAGGTACAGAGAGAAGAGGAAGAACCGGAAATTCGAGAAGACAGTCCGATACGCATCAAGAAAAGCTTATGCAGAAACCCGACCCAGGGTCAAAGGCCGGTTCGCGAAACGAACGGATATGCTATCAGAGGTTGATGAAATCTATGGCTCAGCTGCTTCACCTGTGTTCCTTAGGGACGCTCAATACGGACTCGTACGAACGTTTTGTCCATTATAA 1110 49.19 MGIDGATIVNGFRGRPCGFCKTDPAAVYCRPDSAFLCLSCDAKIHCANKLASRHDRVWMCEVCEQAPAVVTCKADAAALCVTCDADIHSANPLASRHVRFPVEPFFDTAESVVKSSSVLNFLVPDETNVCDGAHHHEEVEVASWLLCNSSFNSKLVHGPEIKPQLGNDHLFFTEMDSFIDFECPNSVNDDHNDIKDSIVPVQTKPDPTLVINHTHSPENCYDIDFCRSKLNSFGYQPQSLSHSVSSSSLDVGVVPQANSMSETSYPMGGQTADSGLPLSGSGNQATQLCGMDREARVLRYREKRKNRKFEKTVRYASRKAYAETRPRVKGRFAKRTDMLSEVDEIYGSAASPVFLRDAQYGLVRTFCPL* 370
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26080814 26082012 - Chy2G044580.1 Chy02g02191 221639
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02191 369 CDD Bbox1_BBX-like 16 59 - -
Chy02g02191 369 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 4 12 366 IPR045281 GO:0009909
Chy02g02191 369 ProSiteProfiles Zinc finger B-box type profile. 55 102 IPR000315 GO:0008270
Chy02g02191 369 PANTHER ZINC FINGER PROTEIN CONSTANS-LIKE 5 12 366 - -
Chy02g02191 369 Pfam B-box zinc finger 57 98 IPR000315 GO:0008270
Chy02g02191 369 SMART bboxneu5 60 102 IPR000315 GO:0008270
Chy02g02191 369 SMART bboxneu5 12 59 IPR000315 GO:0008270
Chy02g02191 369 Pfam CCT motif 293 335 IPR010402 GO:0005515
Chy02g02191 369 CDD Bbox1_BBX-like 60 102 - -
Chy02g02191 369 ProSiteProfiles Zinc finger B-box type profile. 12 59 IPR000315 GO:0008270
Chy02g02191 369 ProSiteProfiles CCT domain profile. 293 335 IPR010402 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02191 Chy05g00918 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02191 Chy-Chr2:26080814 Chy11g00733 Chy-Chr11:9809676 2.86E-30 dispersed
Chy02g02191 Chy-Chr2:26080814 Chy02g02192 Chy-Chr2:26089518 0 tandem
Chy03g01067 Chy-Chr3:14104800 Chy02g02191 Chy-Chr2:26080814 1.27E-94 transposed
Chy07g00776 Chy-Chr7:8917093 Chy02g02191 Chy-Chr2:26080814 2.52E-07 transposed
Chy02g02191 Chy-Chr2:26080814 Chy05g00918 Chy-Chr5:13758625 9.02E-89 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17576 PF06203 CCT 1.30E-17 CL0281 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02191 - - csv:116401631 709.523