Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02214 ATGGCAGCCCTCCAAATTCATGGCACGGAAACCGAAATCTCCGCAGCGTTTCTGGTAGATCGAATCATTGACCTTCATGAAAGCATCTCGAAGCTTGAAACCCTAAGGCCATGCAAGAAAGTGAACAACCTCTTCACCAACCTAGTGAACTTATGCATTTTGCCTTGTTCAATAGATGTCTCCACATTGCCACCAAATTTACAAGTCATTCGTGAGAGCCTCATAATTCTATGTGGCCAAGCTGAAGGCTTACTCGAGTTAGAATTCTCAACTTTGCTAAGCAAAATCCCAAAACCTCTCAACAACCTCACTTTATTTCCATATTACCAAAACTACATCAAGTTAGCCAACCTTGAAAACAAAATTCTAAATGACAATGGAATTGTCAATCCCAAGAAGGTAGCTTTTGTGGGATCAGGTCCTTTGCCTCTAACTTCAATTATCATGGCCATGCAACACATGAAGGGCACACATTTCGATAACTACGACGTAGACAGTGTGGCGAATGACGTAGCGAGAAAGATCGTGGGGTCAGATGCTGATCTGGAGGGGAGAATGAAATTTTGCTCTAGTGATATTGTTGAGGTAAAAGAAGAGCTTGGAGGCTATGATTGTGTGTTTTTGGCTGCTCTCGTGGGGATGAATAAGGAAGAAAAAGTGAAAATTATAAGGCATTTAAGGAAATATATGAAAGGAGGTGGGATTTTGTTGGTGAGAAGTGCTAAAGGAGGAAGAGCATTTCTGTATCCTGTGGTTGAAGTTGAAGTTTTAGTTGGCTTTGAAATTCTATCTATTTTTCATCCAACGGATGATGTTGTCAATTCGGTTATCTTAATTCGTAAGTTAGTCTATGATTAA 858 40.33 MAALQIHGTETEISAAFLVDRIIDLHESISKLETLRPCKKVNNLFTNLVNLCILPCSIDVSTLPPNLQVIRESLIILCGQAEGLLELEFSTLLSKIPKPLNNLTLFPYYQNYIKLANLENKILNDNGIVNPKKVAFVGSGPLPLTSIIMAMQHMKGTHFDNYDVDSVANDVARKIVGSDADLEGRMKFCSSDIVEVKEELGGYDCVFLAALVGMNKEEKVKIIRHLRKYMKGGGILLVRSAKGGRAFLYPVVEVEVLVGFEILSIFHPTDDVVNSVILIRKLVYD* 286
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26256628 26257485 - Chy2G044810.1 Chy02g02214 221662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02214 285 PANTHER NICOTIANAMINE SYNTHASE 1 283 - -
Chy02g02214 285 Gene3D Vaccinia Virus protein VP39 14 283 IPR029063 -
Chy02g02214 285 Pfam Nicotianamine synthase protein 15 282 IPR004298 GO:0030410|GO:0030418
Chy02g02214 285 CDD AdoMet_MTases 137 238 - -
Chy02g02214 285 PANTHER NICOTIANAMINE SYNTHASE 3 1 283 IPR004298 GO:0030410|GO:0030418
Chy02g02214 285 ProSiteProfiles Nicotianamine synthase (NAS)-like family profile. 10 285 IPR004298 GO:0030410|GO:0030418
Chy02g02214 285 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 123 239 IPR029063 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02214 Chy-Chr2:26256628 Chy05g01039 Chy-Chr5:14996651 8.49E-83 dispersed
Chy02g02214 Chy-Chr2:26256628 Chy05g01038 Chy-Chr5:14979736 9.31E-93 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02214 K05953 - csv:101209464 545.814