Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02216 ATGGTGTTAAATTTGATGATACCCCTTTTACTGTGTAGGTGTGAAGCAAAGATCAGAACAGATATTGGATTCTCCATCCAACAAGATTTTCAAGCTTGGTCCAGTAGTTGCTATCTTCTTTCGTCACCTCTCATCTCACTTCACTCACCAAAACTAAATCCACCAATGGCTGCCGCCGACGTTTCCTCACCGGAATTCATTTTCCGTTCAAAACTCCCTGAAATTCCCATCTCCACCCATCTCCCATTGCACACATATTGTTTCGAAAATATCTCCGAATTCAAACGCCGTCCATGTCTAATCAACGCCGCCACTGGCCACACCTACACCTACGGCGAAGTTCAAGCAACATCCCGCCGAGTGGCTGCAGGTCTCCACAAGTTAGGTATTGGAAAAGGTGACGTCGTCATGCTACTCCTGCAAAACACCCCAGAGTTCGTTTTAGCTTTCCTCGGAGCGTCCTACCTCGGCGCCGCCGCTACCATGGCCAACCCTTTCTTCATGCCGTCGGAAATCGCAAAACAAGCTGTGTCATCTGGCGCCAAGGTGATCATAACCCAAGCTGCTTTTGCAGAAAAAGTGAAAAACATATCTCAGGAAAATGAGATGATCATTAAAGTAATATTCATCGACGACGATGATCCTCCGCAATTTTCGTCGTTGATTGAGGACGTGTCAAAAGAGGAGGAGTTGGGAATGGGAGATGTGAAAATCAGTCCAGACGACGTCGTTGCGTTGCCTTATTCGTCTGGAACCACCGGTCTTCCAAAAGGAGTTATGCTGACTCATAAAGGATTAGTGACCAGCGTGGCACAACAGGTGGATGGTGAAAATCCACACCTCCATATCCGAAGCGACGATGTGGTTTTATGCCTTCTTCCTTTATTTCACATATATTCTCTGAACTCAATCATGATGTGTGCGTTACGAGTGGGAGCTGCGATTTTAATCGTTCAGAAGTTCGACGTTAATTCCCTTGTAGAATTGGTTTCTAAATACAAAGTCACCTTTGCGCCGTTTGTGCCTCCTATTGTACTTGCAATTGCCAAAAGTCCAGCTGTTGACCATTTTGACATGTCGTCTTTGCGTATCGTGTTGTCGGGAGCTGCACCATTGGGGAAGAATCTTGAAGATGCCTTTCGAGCCAAGCTTCCCCATGTCATTCTTGGCCAGGGATATGGAATGACTGAGGCAGGGTCAGTGATGACGATGTCGTTAGCCTTTGTAAAGGAGGGTTTCGGGATAAAATCGGGAGGTTGTGGAACAATAATGAGAAATTCCGAAATGAAGATACTAAACCTGCAAACGGGAGCGTCTCTTCCCAGGAATCAAACTGGGGAGATTTGTATTAGAAGTTCTCAAATGATGAAAGGATACCTCAACGACGAAGATGCCACGAAGGCTATAATCGACGAAGACGGATGGCTGCACACCGGCGACATAGGTTTCGTCGACGACGACGATGAGCTCTTCATCGTCGATCGTCTCAAGGAATTGATCAAATATAAAGGCTTCCAGGTAGCCCCGGCGGAGTTGGAAGCCCTGCTTATATCCCACGCCCACATCGCCGACGCCGCTGTTATACCTATGAATGATGAAGTTGCTGGGGAGGTTCCGGTTGCGTTCATTGTTCGATTTGACGGCTCCAACATCACTGAAGATGAAATTAAGCAATTCATCTCCAAACAGGTTGTGTTTTATAAGAGGATTAATCGTGTCTTCTTCGTGGATTCCATTCCTAAAAGTCCTTCTGGCAAAATCTTGAGGAGACAACTTAGAGCTTTGCTCGCAGCCAGTATTTCTTAA 1806 46.29 MVLNLMIPLLLCRCEAKIRTDIGFSIQQDFQAWSSSCYLLSSPLISLHSPKLNPPMAAADVSSPEFIFRSKLPEIPISTHLPLHTYCFENISEFKRRPCLINAATGHTYTYGEVQATSRRVAAGLHKLGIGKGDVVMLLLQNTPEFVLAFLGASYLGAAATMANPFFMPSEIAKQAVSSGAKVIITQAAFAEKVKNISQENEMIIKVIFIDDDDPPQFSSLIEDVSKEEELGMGDVKISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPHLHIRSDDVVLCLLPLFHIYSLNSIMMCALRVGAAILIVQKFDVNSLVELVSKYKVTFAPFVPPIVLAIAKSPAVDHFDMSSLRIVLSGAAPLGKNLEDAFRAKLPHVILGQGYGMTEAGSVMTMSLAFVKEGFGIKSGGCGTIMRNSEMKILNLQTGASLPRNQTGEICIRSSQMMKGYLNDEDATKAIIDEDGWLHTGDIGFVDDDDELFIVDRLKELIKYKGFQVAPAELEALLISHAHIADAAVIPMNDEVAGEVPVAFIVRFDGSNITEDEIKQFISKQVVFYKRINRVFFVDSIPKSPSGKILRRQLRALLAASIS* 602
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26272015 26277370 - Chy2G044830.1 Chy02g02216 221664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02216 601 Gene3D - 59 496 IPR042099 -
Chy02g02216 601 CDD 4CL 77 592 - -
Chy02g02216 601 SUPERFAMILY Acetyl-CoA synthetase-like 68 598 - -
Chy02g02216 601 ProSitePatterns Putative AMP-binding domain signature. 246 257 IPR020845 -
Chy02g02216 601 Gene3D - 497 599 IPR045851 -
Chy02g02216 601 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 62 595 - -
Chy02g02216 601 Pfam AMP-binding enzyme 89 502 IPR000873 -
Chy02g02216 601 Pfam AMP-binding enzyme C-terminal domain 511 586 IPR025110 -
Chy02g02216 601 PANTHER 4-COUMARATE:COA LIGASE-LIKE PROTEIN 62 595 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02216 Chy-Chr2:26272015 Chy04g01325 Chy-Chr4:19794468 0 dispersed
Chy12g01184 Chy-Chr12:16667488 Chy02g02216 Chy-Chr2:26272015 9.08E-116 dispersed
Chy04g00794 Chy-Chr4:10206486 Chy02g02216 Chy-Chr2:26272015 4.68E-116 transposed
Chy06g01432 Chy-Chr6:15239519 Chy02g02216 Chy-Chr2:26272015 5.12E-30 transposed
Chy10g00774 Chy-Chr10:13818401 Chy02g02216 Chy-Chr2:26272015 4.46E-134 transposed
Chy10g01278 Chy-Chr10:17318922 Chy02g02216 Chy-Chr2:26272015 4.26E-118 transposed
Chy02g02216 Chy-Chr2:26272015 Chy05g00951 Chy-Chr5:14103681 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02216 K01904 - csv:101218077 1024.23