Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02233 ATGCCTTCTGATTCTTTATCTGAAGGAGCTGCTCTCGAACCATTAAGATCCAGTATGATGAGTATGGAGAAGAAAAGGAATTTGGTCTATGAAATAGCAGATCAGCCACATGCTTCTGAACTGCTTCAGTCCTGGAGTCGACAAGAGATTTTAGAGATCCTGTGTGCAGAGATGGGAAAAGAGAGGAAATATACTGGATTAACAAAACTAAAAATAATTGAGAACCTTCTGAAAATTGTTGGTAAAAAGAAATCAGGGTCAACTGAGGATGTAACAGACCTCGATAGTCAGTCTTCTCCTTGTCCTTCTCCAAAGATTTCCAAACGGCAAAGAAAAATTGATCAGCCAGCACGGCTTCCTGTTCCTGTAAACAATAGTCCAATCAGTAACTGTAGGACTGACTCAAATATTGCAGTGTACTGTAGAAATTCGGCATGCAAAGCTAACATAAATCAAGATGATAGATTTTGCAAGAGGTGTTCATGCTGCATCTGTTATCAGTATGATGATAATAAGGATCCTAGTCTGTGGTTAAGTTGCAGCTCTGACCCACCATTTCAAAGCACTTCATGTCGTATGTCATGCCATCTTGAATGTGCACTGAAGCATGAAAAATATGGGATTTCTAGAGGACAGCAAACTGGAATTGAAGGGACTTTCTGTTGTGTATCTTGTGGAAAAGTCAATGACTTGATTGGGTGTTGGAGAAAACAATTGATGAAGGCAAAGGAAACAAGACGGGTGGATATCCTGTGTTACCGCATCTCTTTAAGCAAAAAGCTTTTGAGTGAAGATGAAAAGTTTCAAGACGTTTATCAGATTGTGGATGAGGCTGTGAAGAAACTTGAAGCTGAGGTGGGTCCTTTGGCTGGTGTACCAGTCGGTACGGGCAGAGGAATAGTGAACAGGCTTTCTTCAGGACCAGAGGTTCAGAAACTCTGCTCGTTAGCCATCGATTCGCTCGACACCCTGCTCTCCACAAAGATCTTACATTACTTGCCCAGTTCCATGATACAAGATACTAATTTGGTAGCTACAAACTTCTTAAGGTTCGAAGATGTTGATGCAACATACGTCACAGTGGTTGTGGGTACTGAAGATGTTTCTTGTAGAGAAACCATTGGTTACAGGCTATGGCATCGAAAGGCAGGCGAAACAGATTACCCTATCGAGCCAACTTGCACCTTGTCTCAACCAAATTTGAGGTTTGTCGTCCGAGGACTAACCCCATCTTCAGAGTACTATTTCAAAGCCATTTCCTTTGATGGGACAGGCGATTTGGGGACATGTGAAGTTCAAGTCTCAACGGCTATTCCTCGGGAGGATGACGCAAGTTGCTTGGTGATTGAAAGAAGTCAGAGTCCTGTGACCAACTTCAGTGAGCTCTCTAATCCTTCTTCCGTAGAAGATGAAACTAACAATATAGTGCCCTGTAGCGACCAGACCGATAGTCAAACAGGGAGCTTTCTTTCTTATTGCAAGGAGTCTGACAAGATTATCACTACTAACCAGTCTGAGGATAGAATAAACTGCACAGATGTCAGTGGAATAGGAACAGCAAAAGGTTCTGTTTCGTCGTTGGATGAGGAACACGTTACAAGAAAAAGTAGCATGCTTCCTGATCCCAATGTTTCAAAACTTGAAGACCGGCATTCTTCTCAAGTCCAAATCATTGAAGGTACAACAAGCATGAACAAGGGCTCGAATTCTGCCATTCAACAAGGGACTAAATCCACACCATTTGTAAGCAGCTCCGAGGCTGGATTGCCAGTTACTCCTTGCAAAATGGAAATACTCAAGGATGTTCTCGGAAGGAGCGGCCGATCGAAGTCCAGCACCAAGGATCGAGATGATAAGGGATCTGGAGGAGAGGAACTCCGAAATGGCAGCACATCTAAGAAGCGAAATGCAGAGAGACAAGATGTGGATTGTACTGCAAACGATCATTCATTTACTTTCTTAACCATGTTATTCATGTTACCTCCGAGTTAA 1992 42.72 MPSDSLSEGAALEPLRSSMMSMEKKRNLVYEIADQPHASELLQSWSRQEILEILCAEMGKERKYTGLTKLKIIENLLKIVGKKKSGSTEDVTDLDSQSSPCPSPKISKRQRKIDQPARLPVPVNNSPISNCRTDSNIAVYCRNSACKANINQDDRFCKRCSCCICYQYDDNKDPSLWLSCSSDPPFQSTSCRMSCHLECALKHEKYGISRGQQTGIEGTFCCVSCGKVNDLIGCWRKQLMKAKETRRVDILCYRISLSKKLLSEDEKFQDVYQIVDEAVKKLEAEVGPLAGVPVGTGRGIVNRLSSGPEVQKLCSLAIDSLDTLLSTKILHYLPSSMIQDTNLVATNFLRFEDVDATYVTVVVGTEDVSCRETIGYRLWHRKAGETDYPIEPTCTLSQPNLRFVVRGLTPSSEYYFKAISFDGTGDLGTCEVQVSTAIPREDDASCLVIERSQSPVTNFSELSNPSSVEDETNNIVPCSDQTDSQTGSFLSYCKESDKIITTNQSEDRINCTDVSGIGTAKGSVSSLDEEHVTRKSSMLPDPNVSKLEDRHSSQVQIIEGTTSMNKGSNSAIQQGTKSTPFVSSSEAGLPVTPCKMEILKDVLGRSGRSKSSTKDRDDKGSGGEELRNGSTSKKRNAERQDVDCTANDHSFTFLTMLFMLPPS* 664
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26407056 26412151 + Chy2G045000.1 Chy02g02233 221681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02233 663 CDD FN3 349 426 IPR003961 GO:0005515
Chy02g02233 663 MobiDBLite consensus disorder prediction 91 105 - -
Chy02g02233 663 MobiDBLite consensus disorder prediction 549 586 - -
Chy02g02233 663 MobiDBLite consensus disorder prediction 521 588 - -
Chy02g02233 663 MobiDBLite consensus disorder prediction 602 641 - -
Chy02g02233 663 MobiDBLite consensus disorder prediction 86 119 - -
Chy02g02233 663 CDD PHD_VIN3_plant 161 225 - -
Chy02g02233 663 Pfam PHD - plant homeodomain finger protein 141 259 IPR032881 -
Chy02g02233 663 SUPERFAMILY Fibronectin type III 352 425 IPR036116 GO:0005515
Chy02g02233 663 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 649 IPR044514 GO:0010048|GO:0040029
Chy02g02233 663 PANTHER VIN3-LIKE PROTEIN 2-RELATED 9 649 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02233 Chy05g00899 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01850 Chy-Chr1:23947097 Chy02g02233 Chy-Chr2:26407056 1.33E-06 dispersed
Chy02g01901 Chy-Chr2:22012373 Chy02g02233 Chy-Chr2:26407056 5.43E-88 dispersed
Chy02g02233 Chy-Chr2:26407056 Chy05g01355 Chy-Chr5:17662570 5.24E-83 dispersed
Chy03g01316 Chy-Chr3:16143816 Chy02g02233 Chy-Chr2:26407056 5.35E-110 transposed
Chy02g02233 Chy-Chr2:26407056 Chy05g00899 Chy-Chr5:13389887 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02233 - - csv:101220456 1272.3