Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02238 ATGGCTGGAAAATTGAGTCTGGAGGAGATCAAGAACGAAACTGTTGACCTGGAGAAAATACCAATTGCAGAAGTGTTTGAACAATTGAAATGTGGCCCAGAAGGTCTCACAACTCAAGAAGGAGAAAACAGACTCCAATTATTTGGTCCCAACAAATTAGAAGAGAAAAAGGAAAGCAAAATACTAAAGTTTTTGGGGTTCATGTGGAATCCTTTGTCATGGGTTATGGAAGCTGCAGCTATTATGGCTATTGCTTTAGCAAATGGTGGTGGAAAGCCTCCAGATTGGGAAGACTTTGTTGGTATTATTTGTTTATTAGTGATCAACTCCACAATCAGTTTCATTGAGGAAAATAATGCTGGCAATGCTGCTGCTGCTCTCATGGCTGGCCTTGCCCCTAAAACCAAGGTACTGAGGGATGGTAAATGGAGTGAGCAGGAGGCTGCAATTTTGGTTCCAGGAGATATCATTAGTGTAAAGTTGGGAGATATTATACCGGCGGATGCTCGTCTTCTCGAGGGCGATCCTTTGAAGGTTGATCAATCTGCATTGACTGGAGAATCACTTCCTGTTACTAAAAATCCAGGGGATGAAATCTTCTCTGGTTCAACTTGCAAGCAAGGGGAAATTGAAGCTGTTGTAATTGCCACTGGTGTTCATACTTTCTTTGGAAAAGCAGCACATCTCGTAGATAGCACTCACCAAGTTGGGCATTTCCAGAAAGTGCTTACAGCAATTGGGAATTTCTGTATTTGTTCTATTGCTTTAGGAATGCTTATTGAAATCATTGTCATGTACCCAATTCAACATCGTAAGTACCGAGACGGAATCGACAATCTTCTCGTTCTCTTGATCGGTGGCATACCAATTGCTATGCCTACTGTTTTATCTGTGACAATGGCTATTGGATCTCACAAACTATCTCAACAAGGCGCCATCACGAAGCGTATGACTGCCATTGAAGAAATGGCTGGTATGGATGTCCTTTGCAGTGATAAAACAGGAACATTGACTCTAAACAAGCTTAGTGTTGATGTAAATTTGGTCGAGGTTTTTGCTAAGGGTGTGGATAAACAACATGTTATTTTGCTGGCTGCAAGGGCTTCTCGAACAGAAAATCAAGATGCAATTGATGCTGCTATTGTAGGAATGCTAGCTGATCCTAAGGAGGCACGAGCAGGCATAAGAGAAGTGCATTTCTTCCCATTCAATCCTGTGGATAAGAGAACTGCATTAACTTACATTGATTCTGATGGTAATTGGCATCGAGCAAGCAAAGGAGCTCCCGAGCAGATCTTAACACTTTGCAACTGCAAAGAGGATGTCAAGAAGAAGGCTCATGCTGTTATTGATAAATTTGCAGAACGCGGTCTTCGCTCGCTGGCTGTTGGGAGACAGGAAGTTCCTGAGAAAAGAAAAGAAAGTCCTGGAAGTCCATGGCAGTTTGTTGGCTTATTGCCTCTGTTTGATCCTCCAAGGCATGACAGTGGAGAAACCATCAAAAGAGCTCTCAATCTGGGAGTGAATGTCAAGATGATTACAGGTGATCAACTTGCCATTGCCAAAGAAACTGGTAGAAGACTTGGAATGGGGACAAACATGTATCCATCTGCATCATTACTTGGTCAACACAAGGATGAAAGCATTGCAGGCATTCCTATTGAAGAGTTAATTGAAAAGGCAGATGGCTTTGCTGGAGTTTTCCCAGAACACAAATACGAGATCGTAAGGAAGTTGCAAGAGAGGAAACATATTTGTGGAATGACCGGAGACGGTGTGAATGATGCTCCTGCACTAAAAAAGGCTGACATTGGAATTGCAGTTGCTGATGCTACTGATGCTGCTAGAAGTGCTTCTGATATTGTTCTCACAGAGCCAGGCTTGAGTGTTATCATCAGTGCGGTCCTTACGAGTAGAGCTATCTTTCAGAGAATGAAGAACTACACAATTTATGCAGTTTCGATCACAATACGTATAGTGTTTGGTTTCTTGCTTATTGCCCTCATATGGAAATTTGACTTCTCCCCATTCATGGTTTTGATCATTGCCATTCTAAATGATGGTACAATCATGACCATTTCAAAAGATAGAGTGAAGCCATCTCCATTACCTGATAGTTGGAAACTGAAAGAGATATTTGCAACAGGCGTTATGCTTGGTGGTTACTTGGCATTGATGACTGTCATATTCTTCTGGATAATGAGGGAGACAGATTTCTTCCCAGAGAAATTTAATGTGAGACCTATTAAGGACAGTCCTAAAGAAATGATGGCTGCTCTTTACCTCCAAGTGAGCATTGTCAGCCAAGCTTTGATATTTGTGACTCGATCGCGTAGTTGGTCCTACTTTGAACGACCGGGGTTGCTACTGATGGGTGCTTTTGTTATTGCACAACTGGTTGCAACACTCATAGCAGTATATGCAAACTGGGAATTTGCAAAGATAAAAGGGGCAGGATGGGGATGGGCTGGTGTAGTTTGGATCTACAGTGTTATTTTCTACATTCCATTAGACTTTATCAAGTTTGCAATTCGCTATATCTTAAGCGGCAAGGCTTGGCTTAACTTACTAGAAAACAAGACCGCCTTTACGACGAAGAAAGACTATGGAAGGGAGGAAAGAGAAGCTCAATGGGCTGCTACTCAAAGAACCTTACATGGCCTCCAACCAGCACCAGAAAGAGCTAGTCACTTCCTTGAAAAGAATAGCTACAGAGAGCTTTCGGAAATCGCCGAGCAGGCCAAGAGACGAGCAGAGATAGCTAGGCTTAGGGAGCTCAATACTTTGAAGGGTCATGTTGAATCAGTAGTGAAATTGAAAGGGTTGGATATTGATACAATCCAACAACATTACACAGTGTAA 2862 42.28 MAGKLSLEEIKNETVDLEKIPIAEVFEQLKCGPEGLTTQEGENRLQLFGPNKLEEKKESKILKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWEDFVGIICLLVINSTISFIEENNAGNAAAALMAGLAPKTKVLRDGKWSEQEAAILVPGDIISVKLGDIIPADARLLEGDPLKVDQSALTGESLPVTKNPGDEIFSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDSTHQVGHFQKVLTAIGNFCICSIALGMLIEIIVMYPIQHRKYRDGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHKLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLSVDVNLVEVFAKGVDKQHVILLAARASRTENQDAIDAAIVGMLADPKEARAGIREVHFFPFNPVDKRTALTYIDSDGNWHRASKGAPEQILTLCNCKEDVKKKAHAVIDKFAERGLRSLAVGRQEVPEKRKESPGSPWQFVGLLPLFDPPRHDSGETIKRALNLGVNVKMITGDQLAIAKETGRRLGMGTNMYPSASLLGQHKDESIAGIPIEELIEKADGFAGVFPEHKYEIVRKLQERKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVFGFLLIALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLKEIFATGVMLGGYLALMTVIFFWIMRETDFFPEKFNVRPIKDSPKEMMAALYLQVSIVSQALIFVTRSRSWSYFERPGLLLMGAFVIAQLVATLIAVYANWEFAKIKGAGWGWAGVVWIYSVIFYIPLDFIKFAIRYILSGKAWLNLLENKTAFTTKKDYGREEREAQWAATQRTLHGLQPAPERASHFLEKNSYRELSEIAEQAKRRAEIARLRELNTLKGHVESVVKLKGLDIDTIQQHYTV* 954
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26446195 26452135 + Chy2G045050.1 Chy02g02238 221686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02238 953 Gene3D - 327 626 IPR023214 -
Chy02g02238 953 Gene3D - 342 489 IPR023299 GO:0000166
Chy02g02238 953 Gene3D - 902 953 - -
Chy02g02238 953 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 35 807 IPR006534 GO:0008553|GO:0016021|GO:0120029
Chy02g02238 953 PANTHER PLASMA MEMBRANE ATPASE 4 933 - -
Chy02g02238 953 Pfam Cation transporter/ATPase, N-terminus 19 82 IPR004014 -
Chy02g02238 953 Pfam E1-E2 ATPase 132 309 - -
Chy02g02238 953 PANTHER CALCIUM-TRANSPORTING ATPASE 4 933 - -
Chy02g02238 953 CDD P-type_ATPase_H 35 842 IPR006534 GO:0008553|GO:0016021|GO:0120029
Chy02g02238 953 Gene3D - 133 217 - -
Chy02g02238 953 SFLD Haloacid Dehalogenase 312 640 - -
Chy02g02238 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 564 677 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 102 345 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 SMART Cation_ATPase_N_a_2 16 88 IPR004014 -
Chy02g02238 953 Coils Coil 904 924 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 589 608 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 330 344 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 180 194 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 612 624 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 506 516 - -
Chy02g02238 953 PRINTS P-type cation-transporting ATPase superfamily signature 484 495 - -
Chy02g02238 953 Pfam haloacid dehalogenase-like hydrolase 326 603 - -
Chy02g02238 953 PRINTS H+-transporting ATPase (proton pump) signature 446 464 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 PRINTS H+-transporting ATPase (proton pump) signature 589 605 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 PRINTS H+-transporting ATPase (proton pump) signature 620 645 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 PRINTS H+-transporting ATPase (proton pump) signature 761 782 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 PRINTS H+-transporting ATPase (proton pump) signature 561 577 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02238 953 SUPERFAMILY Calcium ATPase, transmembrane domain M 16 848 IPR023298 -
Chy02g02238 953 SUPERFAMILY HAD-like 326 636 IPR036412 -
Chy02g02238 953 SUPERFAMILY Calcium ATPase, transduction domain A 133 230 IPR008250 -
Chy02g02238 953 ProSitePatterns E1-E2 ATPases phosphorylation site. 332 338 IPR018303 -
Chy02g02238 953 Gene3D - 95 816 - -
Chy02g02238 953 SFLD p-type atpase 312 640 IPR044492 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02238 Chy-Chr2:26446195 Chy03g01190 Chy-Chr3:15048866 0 dispersed
Chy02g02238 Chy-Chr2:26446195 Chy05g00892 Chy-Chr5:13196107 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02238 K01535 - csv:101221783 1805.8