Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02243 ATGGCGGCGACGGAGGAAGAGGGAAAGAAGGGTGGTGGGTTGAAGAAAAGTTACTTCGATGTTTTGGGGATTTGTTGTTCTTCAGAAATTCCGGTGATCGAGAACATATTGAAGGATATTGAAGGGATTAAAGAGATTGGAGTGATTGTTGCAACAAGAACTGTCATTGTTCTTCATGATGATCTTCTCGTTTCCCAAGCACAAATTGTTAAAGCCCTAAACCAAGCAAGATTTGAAGCGAACGTTAGAGCGTACGGGGATCAGAAAGATCACCGGAAAAAATGGCCGAGCCCGTATGCGGTGGCCAGTGGGTTGTTGCTGCTCTTGTCGTTACTCAAATATGTGAATCCTATTTTTCGATGGGTCGCTTTAGCCGCCGTCGCCGCCGGAATCTTGCCCATTGTCCTCAAAAGCTTCGCCGCCGTTCGCCATCTCAGAATCGACATCAATATTCTTGCTTTAATTGCAGTAATCGGAACAATTGTGCTGAAGGATTACTTGGAAGCAGCCACCATCGTCTTCCTCTTCACCATCGCCGAATGGCTCGAGTCCAGAGCCGCCCACAAGGCCAACGCCGTCATGTCATCCCTTCTAAGCATTGCTCCTCAGAAAGCGGTTCTAGCCGACACCGGCGAAGTTGTCGGCGCCGACGAGGTCAAATTAGGGACTCTTCTGGCTGTGAAGGCCGGTGAAGACATACCCATTGATGGAATCGTTGTGGAAGGAAAATGCGAAGTGGATGAGAAAACACTTACAGGTGAATCTTTTCCTGTTCCCAAACAAAAGAATTCCACTGTTTGGGCTGGTACCATTAATCTAAATGGCTATGTTACTGTAAAGACTACTGCCCTTGCTGAAGACTGCGTGGTGGCCAAAATGGCTAAGCTGGTTGAAGAGGCCCAGAACAATAAATCTAGAACTCAAAGGTTCATTGACAAATGTGCCAAATTCTATACTCCAGCTGTTATAATAATATCAACTTGCATAGTAGTGATTCCACTTGCTTTGAGACTTCCCAATCGCAGCCATTGGTTTCACTTGGCCTTGGTTGTGTTAGTAAGCGCGTGTCCATGTGCACTCATCCTTTCCACGCCTGTTGCGTCTTTCTGTGCACTTACTAAGGCAGCAACATCTGGTCTTTTAATCAAAGGCGGTGACTACCTTGAAACACTTGGCAAAATTAAGATCATGGCCTTTGATAAAACTGGGACAATAACAAGAGGTGAATTTACGGTGACTGAATTTCAAGTTCTTGACAAGGACAATATAAGCTTAGACACATTGCTGTACTGGGTGTCGAGCATCGAGAGCAAGTCCAGTCATCCAATGGCAGCTGCACTTGTTGACCATGGAAGATCACTATCCATTGATCCCAAACCTGAAAATGTGGACGACTTTCAAAATTTTCCTGGAGAAGGTGTTCATGGGAGAATTGATGGGAAAGACATCTATATTGGAAATCGAAAAATTGCTACAAGAGCCAACTGCGCAACAGTCCCAGAGATCAAAGATGAAGCAAAGGATGGGAGGACTGTTGGATACATATTCTGTGGAACTATTGCCGCTGGAGTCTTTAGTCTGTCTGATTCTTGTAGAACAGGAGCTAAAGAGGCCATGGATGAGCTTAGATCTCTCGGTATAAAAACAGCCATGCTCACTGGAGACAGTTCTGCAGCAGCCTTGCAAGCACAAAAAGAATTGGGAAAGGCGTTACAAACAGTTCATGCCGAACTTCTACCTCAAGACAAGACAAGGCTTATCAATGACTTCAAAAAGGAGGGGCCAACAGCTATGATTGGAGATGGTCTAAACGATGCCCCTGCCTTGGCCACAGCTGATATCGGCATATCAATGGGAATCTCAGGTTCAGCCCTCGCAATAGAAACTGGAGATGTAATTTTAATGACTAATGATATCAGGAAAGTTCCAAAAGCCATTCGACTTGCAAGAAGAGCTAATAATAAAGTAATTGAAAATGTGATTCTATCCGTTGCTCCTAGGATTGCTATACTTGGCCTGGCATTTGGTGGTCATCCACTTGTTTGGGCAGCAGTTCTTGCTGATGTTGGTGCCTGTGTACTAGTTATCCTCAACAGTATGCTCCTGCTGCGAGGAACAGACGGACACAAAGGGAAGAAAGCTGGCAAGTTTTCTGCTACTCACTGTTCCTCCAAACAAAAATGCTGTCATGTTAGCAGCCATTCAGATGAATATAGTGGTCACACCCATGATCATGGTTGCAAGGATCACAGTTCTCACTCTTCTAGGCATAGTCACCATCACCATCATCATCACCATGAGCACGAGGACTGTGGCTCTCTCAAGAATACTCATGATGGTTGTTTACAACAGAATCATCCTTCCATGTGTGATTCCAAGTTGAAAAATTCAAGTTCATGCAAGAAAAGTAAACTCATGAACCCAAGTTCTAAGATAGATGGTTCTACCGGGTGTGTAAAACTCTGTGAACATGATCACACCCATGATCATGGGTGCAGTGACGGCTCAGACTCTTCTAGTCATAGTCATCATCAACATCACCACCACCATCATCATGAGCACGAGGATTGCCACTCACTCGAGAAAACTCATGATGTTTGTTTACCTCAGAATCATGCTTCCAAGTGCGACTCCAGGTCGAAAAATTCGAGTTCGTGCAACGAAAGTAAACACGTAGACTCGTGTTCTAAGGTAGATGGTTCTACCGGTAGTGTACAACTCTGTGAACATGATCACACGCATGATCATGGGTGCAACACCGACAGTACTGACTCTTCTAGTCATAGTCACCACCACCATCATGAGCACGAGGACTGTGGTTCTCTCAAGAAAACTCATGATGGTTGCGTACTTCAGAACTGTGCTTCCAAGTGTGATTCCGGGATGAAATCTTCAAGTTCATGCAAGAAAAGTAAACTCGTGGACTCAAGTTCTAAGGTAGATGATTCTGCAAGCAGTCTAAAACCCTGTGAACATGGACATGTCCGTCATGATCAGCCTGCTGAACAGGACCACCATCCTTATTCTCCATGCACTGATCATCATGCCAAGGATGAAATCTGCTCTCCAGAGAATACACAAGAGTTTTGCTTGTTTCAGAAGTGTGCATCAAATTCATGTGAGAAAATCAAGTGCACAAGCTCACCTGCAAGCCACGATGGATCTGCTGTGATTGTTGAGCTCGATGAAAGTGGATGTTGTACTCATAATACCCAATCTGCTCAACATGATCACGACATCCAAAGTCCCAAATGTGATTTTGATGACATGCACTCACCCAGTTTTGAACATCATATTAGTAATGGTTGTTGCTCTCAAAAGAATACTCACAAGGTTTCTTTATCTCATCCAATGCGTGATTCTGAAACCTGCAAGGATGGCGTTCATCTTCATTGTAAAGCATCAAATGGAGATAATGGAGCAATCAACAATACTGTAAATATCAAGCTCGAGGCAGACCATTCGAACTCTAAACGTGGCAACAATAGTAATAAGCCAATGGAAAACAGAGAGACAAACAACTGTAAAAGCTGCAGAAGGGGAAGTTCACAATTCAAAATTGGAAATTCTTGTGCAGGCTTGAATAAGAGAGAAGTGGGTGGGTGTTGTAAGAGCTACATGAAGGAGTGTTGTAGGAAGCATGGCGATATCAGAATGGCAGTTCGAGGAGGCTTAAACGAAATCATCATAGAATAG 3696 44.18 MAATEEEGKKGGGLKKSYFDVLGICCSSEIPVIENILKDIEGIKEIGVIVATRTVIVLHDDLLVSQAQIVKALNQARFEANVRAYGDQKDHRKKWPSPYAVASGLLLLLSLLKYVNPIFRWVALAAVAAGILPIVLKSFAAVRHLRIDINILALIAVIGTIVLKDYLEAATIVFLFTIAEWLESRAAHKANAVMSSLLSIAPQKAVLADTGEVVGADEVKLGTLLAVKAGEDIPIDGIVVEGKCEVDEKTLTGESFPVPKQKNSTVWAGTINLNGYVTVKTTALAEDCVVAKMAKLVEEAQNNKSRTQRFIDKCAKFYTPAVIIISTCIVVIPLALRLPNRSHWFHLALVVLVSACPCALILSTPVASFCALTKAATSGLLIKGGDYLETLGKIKIMAFDKTGTITRGEFTVTEFQVLDKDNISLDTLLYWVSSIESKSSHPMAAALVDHGRSLSIDPKPENVDDFQNFPGEGVHGRIDGKDIYIGNRKIATRANCATVPEIKDEAKDGRTVGYIFCGTIAAGVFSLSDSCRTGAKEAMDELRSLGIKTAMLTGDSSAAALQAQKELGKALQTVHAELLPQDKTRLINDFKKEGPTAMIGDGLNDAPALATADIGISMGISGSALAIETGDVILMTNDIRKVPKAIRLARRANNKVIENVILSVAPRIAILGLAFGGHPLVWAAVLADVGACVLVILNSMLLLRGTDGHKGKKAGKFSATHCSSKQKCCHVSSHSDEYSGHTHDHGCKDHSSHSSRHSHHHHHHHHEHEDCGSLKNTHDGCLQQNHPSMCDSKLKNSSSCKKSKLMNPSSKIDGSTGCVKLCEHDHTHDHGCSDGSDSSSHSHHQHHHHHHHEHEDCHSLEKTHDVCLPQNHASKCDSRSKNSSSCNESKHVDSCSKVDGSTGSVQLCEHDHTHDHGCNTDSTDSSSHSHHHHHEHEDCGSLKKTHDGCVLQNCASKCDSGMKSSSSCKKSKLVDSSSKVDDSASSLKPCEHGHVRHDQPAEQDHHPYSPCTDHHAKDEICSPENTQEFCLFQKCASNSCEKIKCTSSPASHDGSAVIVELDESGCCTHNTQSAQHDHDIQSPKCDFDDMHSPSFEHHISNGCCSQKNTHKVSLSHPMRDSETCKDGVHLHCKASNGDNGAINNTVNIKLEADHSNSKRGNNSNKPMENRETNNCKSCRRGSSQFKIGNSCAGLNKREVGGCCKSYMKECCRKHGDIRMAVRGGLNEIIIE* 1232
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26524277 26531197 + Chy2G045100.1 Chy02g02243 221691
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02243 1231 Gene3D - 389 650 IPR023214 -
Chy02g02243 1231 SUPERFAMILY Calcium ATPase, transduction domain A 212 297 IPR008250 -
Chy02g02243 1231 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA2-RELATED 4 725 - -
Chy02g02243 1231 Gene3D - 187 301 - -
Chy02g02243 1231 Pfam haloacid dehalogenase-like hydrolase 394 613 - -
Chy02g02243 1231 ProSiteProfiles Heavy-metal-associated domain profile. 16 82 IPR006121 GO:0046872
Chy02g02243 1231 MobiDBLite consensus disorder prediction 985 1009 - -
Chy02g02243 1231 Pfam E1-E2 ATPase 208 376 - -
Chy02g02243 1231 PANTHER CADMIUM/ZINC-TRANSPORTING ATPASE HMA4-RELATED 4 725 - -
Chy02g02243 1231 CDD P-type_ATPase_HM 99 701 - -
Chy02g02243 1231 TIGRFAM ATPase-IB_hvy: heavy metal translocating P-type ATPase 149 702 IPR027256 GO:0006812|GO:0016021|GO:0019829
Chy02g02243 1231 ProSitePatterns Hypothetical cof family signature 2. 599 621 - -
Chy02g02243 1231 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 172 677 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02243 1231 MobiDBLite consensus disorder prediction 979 1009 - -
Chy02g02243 1231 SFLD Haloacid Dehalogenase 381 651 - -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 740 771 - -
Chy02g02243 1231 Gene3D - 13 84 - -
Chy02g02243 1231 CDD HMA 19 80 IPR006121 GO:0046872
Chy02g02243 1231 ProSitePatterns Anaphylatoxin domain signature. 1177 1211 IPR000020 GO:0005576
Chy02g02243 1231 PRINTS P-type cation-transporting ATPase superfamily signature 398 412 - -
Chy02g02243 1231 PRINTS P-type cation-transporting ATPase superfamily signature 623 635 - -
Chy02g02243 1231 PRINTS P-type cation-transporting ATPase superfamily signature 599 618 - -
Chy02g02243 1231 PRINTS P-type cation-transporting ATPase superfamily signature 545 555 - -
Chy02g02243 1231 PRINTS P-type cation-transporting ATPase superfamily signature 247 261 - -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 833 855 - -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 1152 1175 - -
Chy02g02243 1231 SUPERFAMILY HMA, heavy metal-associated domain 12 86 IPR036163 GO:0046872
Chy02g02243 1231 MobiDBLite consensus disorder prediction 919 943 - -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 752 766 - -
Chy02g02243 1231 SFLD p-type atpase 381 651 IPR044492 -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 873 898 - -
Chy02g02243 1231 SUPERFAMILY Calcium ATPase, transmembrane domain M 149 392 IPR023298 -
Chy02g02243 1231 TIGRFAM ATPase-IB2_Cd: cadmium-translocating P-type ATPase 149 492 - -
Chy02g02243 1231 MobiDBLite consensus disorder prediction 1159 1175 - -
Chy02g02243 1231 SUPERFAMILY HAD-like 398 700 IPR036412 -
Chy02g02243 1231 ProSitePatterns E1-E2 ATPases phosphorylation site. 400 406 IPR018303 -
Chy02g02243 1231 Gene3D - 409 531 IPR023299 GO:0000166
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02243 Chy-Chr2:26524277 Chy11g00225 Chy-Chr11:2099911 6.25E-68 dispersed
Chy02g00041 Chy-Chr2:294393 Chy02g02243 Chy-Chr2:26524277 2.85E-86 transposed
Chy07g00281 Chy-Chr7:2272960 Chy02g02243 Chy-Chr2:26524277 5.90E-62 transposed
Chy07g00838 Chy-Chr7:10853023 Chy02g02243 Chy-Chr2:26524277 6.38E-43 transposed
Chy08g00480 Chy-Chr8:11807453 Chy02g02243 Chy-Chr2:26524277 1.54E-69 transposed
Chy09g01215 Chy-Chr9:14271972 Chy02g02243 Chy-Chr2:26524277 9.75E-67 transposed
Chy11g00510 Chy-Chr11:5556956 Chy02g02243 Chy-Chr2:26524277 7.35E-60 transposed
Chy11g00558 Chy-Chr11:6278501 Chy02g02243 Chy-Chr2:26524277 3.40E-58 transposed
Chy02g02243 Chy-Chr2:26524277 Chy05g00883 Chy-Chr5:13082180 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02243 K01534 - csv:101211188 2232.22