Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02263 ATGGCCGTCGATCTAGCAGCTTTTCCGTCCATCTTCGACGATCAAACAGCCATTGAAGAAGCCGCCACTGCGGGTTTACAAAGCATGAGCCATCTAATCCATCTTTTATCCAAACAACAACAACACCACCACTCTGAATCTCCTAATAACATCGATCTCAATTCTTCACTTCTCACCGATTTCACCGTCTCCAAATTCAAACGATTGATTTCCCTCTTAAACCGAACTGGCCACGCTCGTTTCCGCCGTGGACCTTCCGATTTTCCAAATCCCGTTCTGAATTCCCTCGATCCGCCTCAGAAAACCCATTTCTCTAAACTTAATTTCTCCCCTGTTTCGAAATTCCCTGAGTCTAGAGATTCCACTACTACCTCTTCCTTTGTGTCTACGGTCACCGGCGACGGTAGTGTTTCTAACGGTAAGCTTGATCTGTCTGTCTATGCAACGCCGCCGGCCAACGCCGGTAAACCGCCGTTGGCGATGAAGAGCAAGTGTAACGATGTATCTGGATTTGGTTGTAAGGTTCCTAATTCGAAGCTCTGTCACTGTGCCAAGCGAAGGAAATCTGGAATGAAGAAAACAGTAAAAGTCCCGGCGATCAGTTCTAAGATCGCTGATATACCCTCCGATGAATACTCATGGAGAAAGTACGGCCAAAAACCCATCAAAGGCTCACCTTATCCTAGAGGGTATTACAGATGTAGCAGCGTGAAAGGATGTCCGGCGAGAAAAAAGGTGGAAAGAGCTCGTGACGATCCGGCGATGCTTCTCGTAACATACGAGGGGGATCACCGTCACCCGCACCCTACGGTCACCGACGGCGTTTCCCAAAAGAGTTGA 840 48.33 MAVDLAAFPSIFDDQTAIEEAATAGLQSMSHLIHLLSKQQQHHHSESPNNIDLNSSLLTDFTVSKFKRLISLLNRTGHARFRRGPSDFPNPVLNSLDPPQKTHFSKLNFSPVSKFPESRDSTTTSSFVSTVTGDGSVSNGKLDLSVYATPPANAGKPPLAMKSKCNDVSGFGCKVPNSKLCHCAKRRKSGMKKTVKVPAISSKIADIPSDEYSWRKYGQKPIKGSPYPRGYYRCSSVKGCPARKKVERARDDPAMLLVTYEGDHRHPHPTVTDGVSQKS* 280
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26712048 26713207 - Chy2G045300.1 Chy02g02263 221711
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02263 279 Pfam WRKY DNA -binding domain 210 267 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g02263 279 SUPERFAMILY WRKY DNA-binding domain 206 269 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g02263 279 Pfam Plant zinc cluster domain 162 206 IPR018872 -
Chy02g02263 279 PANTHER TRANSCRIPTION FACTOR WRKY FAMILY-RELATED 12 270 - -
Chy02g02263 279 MobiDBLite consensus disorder prediction 260 279 - -
Chy02g02263 279 ProSiteProfiles WRKY domain profile. 203 269 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g02263 279 Gene3D WRKY domain 193 270 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g02263 279 PANTHER WRKY TRANSCRIPTION FACTOR 21-RELATED 12 270 IPR044810 GO:0003700
Chy02g02263 279 SMART WRKY_cls 208 268 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02263 Chy-Chr2:26712048 Chy11g00548 Chy-Chr11:6055556 3.05E-63 dispersed
Chy02g02263 Chy-Chr2:26712048 Chy02g00896 Chy-Chr2:5782349 2.13E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17585 PF03106 WRKY 4.40E-26 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02263 - - csv:101204382 523.857