Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02273 ATGAGTGGTGCAATGGGACTATCCAAGTCTAGCATTTTGGTGTTTTGGCTTTCAGTTTTAGTCGTTTGTGTTACCTCCGTTGCGGGTGCTCGGAAGACGTTGTTTTTGGATCACACCGGTGTTAGAGACAACAAAAACAGCTTGACAACTACACTGGCGGAGACGACAATCAAAAGGTGCAAGTACTCGAAGAACAACGTTAACGACCTCCATTGTTGTGAGTGCTTCTTCTTGAGCTCTAAGAAGATGATGATGATGATCAATAATAATAATGGCACCAACTTTGAAGAGAAAAGGTTTCTCAAGTCTCGAGATCCTAACGAAAAAGAGGCCAACTCAGGGATGCCTCGCCGAATACTTCAAGGAAGCTCTAAAGATCAGATGATGAAGAGCTCTTCATCTCTGCTACAGTCTCCAGTTTTCTGCTTCTTCCTTGGGATGTTAGCTGTGCTGGTTATATTGCTGATTCTCTTATTGATCTTTAGGAAGTCTCTTAAACAAAATAAAGTGGTGAAGTTATTAAAACAAAGTGGAACAAGTCAAGCATCAACAGATTTGTTAAGCGATAACCTGCATTCATTAAGTTACTTTGACTTTCACACACTGAAAAAGGCCACAAAGAATTTTAGCCCAACAAATCTTCTTGGCCAGGGAGGATTTGGACCTGTCTATCTGGGTACACTCGAAGATGGAAGGTTAGTTGCAATTAAGAAACTTTCACTTAACAAATCCCAACAAGGAGAAGCAGAATTTCTATCAGAAGTCAGACTGATAACAAGCATCCAACACAAGAACCTTGTTCGCCTGCTTGGTTGTTGCTCCGATGGGCCTCAACGGCTACTCGTGTATGAATACATGGAGAACAGGAGTTTAGATCTCATAATATATGGTGGAAGTGAGCAAATCCTCAACTGGAACACCAGATTGAAGATTATCAGAGGCATTGCCAAAGGGTTGCAATATCTTCATGAGGATTCCCATCTAAGAATAATTCACCGAGACATCAAAGCAAGCAATATTCTTCTTGATGACAAATTTCAACCGAAGATTGGTGATTTTGGGCTGGCCAGGTTCTTCCCTGATGATCAAGCTTACCTAAGCACTACATTTGCTGGAACTCTGTAA 1125 41.33 MSGAMGLSKSSILVFWLSVLVVCVTSVAGARKTLFLDHTGVRDNKNSLTTTLAETTIKRCKYSKNNVNDLHCCECFFLSSKKMMMMINNNNGTNFEEKRFLKSRDPNEKEANSGMPRRILQGSSKDQMMKSSSSLLQSPVFCFFLGMLAVLVILLILLLIFRKSLKQNKVVKLLKQSGTSQASTDLLSDNLHSLSYFDFHTLKKATKNFSPTNLLGQGGFGPVYLGTLEDGRLVAIKKLSLNKSQQGEAEFLSEVRLITSIQHKNLVRLLGCCSDGPQRLLVYEYMENRSLDLIIYGGSEQILNWNTRLKIIRGIAKGLQYLHEDSHLRIIHRDIKASNILLDDKFQPKIGDFGLARFFPDDQAYLSTTFAGTL* 375
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26804902 26810212 + Chy2G045400.1 Chy02g02273 221721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02273 374 PANTHER RECEPTOR-LIKE KINASE 185 372 - -
Chy02g02273 374 ProSitePatterns Serine/Threonine protein kinases active-site signature. 330 342 IPR008271 GO:0004672|GO:0006468
Chy02g02273 374 Gene3D Transferase(Phosphotransferase) domain 1 286 374 - -
Chy02g02273 374 ProSiteProfiles Protein kinase domain profile. 209 374 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02273 374 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 185 372 - -
Chy02g02273 374 SMART serkin_6 209 371 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02273 374 SUPERFAMILY Protein kinase-like (PK-like) 188 373 IPR011009 -
Chy02g02273 374 Gene3D Phosphorylase Kinase; domain 1 167 285 - -
Chy02g02273 374 Pfam Protein kinase domain 212 373 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02273 Chy-Chr2:26804902 Chy01g00873 Chy-Chr1:7804856 7.82E-62 dispersed
Chy02g02273 Chy-Chr2:26804902 Chy12g00986 Chy-Chr12:15140058 2.29E-56 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71095 PF00069 Pkinase 7.10E-36 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02273 - - csv:101203677 451.825