Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02280 ATGAAGAACTTACCTTTCTACTTCCTCCGATCTCCGCCGTTTCTTCGCTTGCCGTTGCCGCCTGCCAACCCCTTCCTGTCTCACCTCTCCTATTTCATAATCATCTCACTCTTTGGCTTTGGAGCTCTAAAGCTCACCCAAACTAGAACCTCCTCCTCCCCAAATGACCTCAACCTTTTCTTCACCTCTGTCTCTGCTGTTTCGGTATCAAGCATGTCTGTCGTTGAAATGGAAGTCTTTTCCAACTTCCAACTTCTCATCATCACCACCCTCATGTTCCTCGGCGGTGAAGTTCTCGTCTCCGCCGTCGGGTTCCAACTCTCTCGTCGGTTCAAATATTTGAACGAAAAAAACCATGTTGATTCGGTTCGGTCCATTGAGATGGAAGAAAGTGGGACATCGTCATCCATGATGGCCACCATTGATGAGTTGAGTATCTCAAGATCGTGTTCGAAGGTTTTGGGTCATACGATAATTGGGTATCTTTTGGCGACGAATGTTCTTGGGTTTTTTCTCATTTTTATATACATTATTGTGGTACCTCATGCAAAGCAAGTGCTTGAAAGCAAAGGCATCAATTTCTTTACTTTTTCAATTTTTAGTACGGTTTCTACTTTTACCAACTGTGGGTTCATACCTACTAACGAAAATATGATCGCTTTCAAGAACAACTCCGGTCTTTTGCTCATCCTCATACCACAGGTATTGTTGGGAGGTTGTTTATATCCAGTGGGTCTCCGGTTGGTGATAATGGCAGCGGCGAAAGTGACGGGGAAGAAGGAGTGGAGATACATATTAAAGAACGAGTCGGAGATGGGGTATTCCCATCTCTTGCCGGGGCTCCGTTGCGGGTTTCTGGCCGTAACAGTGGCGGGATTCATAGTGTTTCAATTGATTATATTTTGCTCATTGGAATGGAACAACTCCGACGGAATTTGGGATGGCCTGAATCCCTACCAGAAGTTTGTGGCCTCACTTTTTCAGGTCACCAACTCAAGACATACCGGAGAATCCATCCTCGATATCTCAGTCATCTCACAGGCGATCTTGGTCGTTTTTGTTGTCATGATGTATCTCCCACCATACACAACTTTTTTACCCATAAGGAACAACAAAGAGAGAGCTTCAATGATGACTGATGGGAAGGACAGAAGACAACACTTAGTGGAATTATTCACATTCTCACAGCTCTCTTATTTGGCCATTTTTATCATTCTCATATGCATCACTGAGAAACAAAAATTAAGAGATGATCCTCTTAACTTTAATCTCCTCAACATCACCATTGAAGTCATCAGTGCATATGGAAATGTTGGACTCTCCAGTGGGTATAGCTGCAAAAGACAAATTAAAGTTGATAGCTCTTGCAAAGATGCATGGTATGGATTTGCAGGAAGATGGAGTTCAAAGGGAAAATTCATTCTTATTCTTGTCATGATTTTTGGAAGAATGAAAAGTTTTATTATGCATACTGGTAAAGCTTGGAAACTATCATAA 1497 42.55 MKNLPFYFLRSPPFLRLPLPPANPFLSHLSYFIIISLFGFGALKLTQTRTSSSPNDLNLFFTSVSAVSVSSMSVVEMEVFSNFQLLIITTLMFLGGEVLVSAVGFQLSRRFKYLNEKNHVDSVRSIEMEESGTSSSMMATIDELSISRSCSKVLGHTIIGYLLATNVLGFFLIFIYIIVVPHAKQVLESKGINFFTFSIFSTVSTFTNCGFIPTNENMIAFKNNSGLLLILIPQVLLGGCLYPVGLRLVIMAAAKVTGKKEWRYILKNESEMGYSHLLPGLRCGFLAVTVAGFIVFQLIIFCSLEWNNSDGIWDGLNPYQKFVASLFQVTNSRHTGESILDISVISQAILVVFVVMMYLPPYTTFLPIRNNKERASMMTDGKDRRQHLVELFTFSQLSYLAIFIILICITEKQKLRDDPLNFNLLNITIEVISAYGNVGLSSGYSCKRQIKVDSSCKDAWYGFAGRWSSKGKFILILVMIFGRMKSFIMHTGKAWKLS* 499
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26852083 26855918 + Chy2G045470.1 Chy02g02280 221728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02280 498 PANTHER SODIUM TRANSPORTER HKT1 19 498 - -
Chy02g02280 498 Pfam Cation transport protein 45 484 IPR003445 GO:0006812|GO:0008324|GO:0055085
Chy02g02280 498 PANTHER POTASSIUM TRANSPORT PROTEIN DDB_G0292412-RELATED 19 498 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02278 Chy-Chr2:26824260 Chy02g02280 Chy-Chr2:26852083 3.41E-36 dispersed
Chy02g02279 Chy-Chr2:26834506 Chy02g02280 Chy-Chr2:26852083 2.14E-40 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02280 K24976 - csv:101206239 880.552