Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02288 ATGGCAATGCCATTTCCGTCGTCGTCGTCGCATGCTACCGGCCTCATCATTCTCATTGTCATTTCATTAGAGATTATTGTTTCTTGTAGTGCTTCTACAGATGCGGATGCGCTTCTCAAGTTCAAGAGCTCTCTTGAAATTAGTAGCAACAACGACGCATTGGGGAATTGGGGTTCGGGTGGGTCTTCATCTTCCCCTTGCTCCGGCAATAAGACGAATTGGGTCGGTATTCTTTGTGAGAAGGGAAATGTTTGGGGATTGAAGCTTGAGAATATGGGGCTCAAAGGGAATATTGACATTGAGTCCCTTGAAGGGGTGCCTCATTTAAGGACACTTAGTCTTATGAATAATGAGTTTGAAGGTTCTTTGCCTGATGTTAAGAGACTTGGGGCATTGAAATCTTTGTATTTGTCAAGGAATCACTTTTCAGGGAATATTCCTGGTGATTCTTTTTCAAATATGTTGTCTTTGAAGAAGGTTCATTTGGCTCATAATGAATTGGAAGGTCAAATTCCTTGGTCTTTGGTTGAGTTGCATCGTTTGTTGGAGTTAAGGCTTGAAGGAAACAAATTTTCTGGTCAAATCCCCAATTTTCAACAAAACACTATCAAGGCCTTTAATCTCTCTAATAATGATCAACTTCATGGTCAAATCCCACCAGCTCTCTCCCGCTTGGATCCGTCCTCCTTTTCAGGCATTGAAGGTTTATGTGGCGCACCACTTAACAAACCATGCAACGCCTCAAAGGTGCCATCAATTGGGAGCATTATCATGGTTTCAATAGCTGTGACATTGGCTCTTCTTGCCATTGGTGCAGGAATAGTCATCCTGAGCCGTTGTAACCAATCGTCATCTAACAATGAGGATCCAGCCCATGGAAAATCTCCAAGTGCTAGTGAGCAAGATCAAGGAGCCGGGGCGAAGTCACCAGACCGTGGCTCGAGCAATGGAAGCGTGACAGGAAAACGGTCAGCCGATAGTGCTAAATTGTCATTTGTAAGAGAGGATTCAGAGAGGTTTGATTTATCAGATTTGCTTAAAGCCTCAGCAGAAATCCTAGGAAGTGGGTGCTTTGGTTCTTCTTACAAAGCAGCTTTGACCAATGGACCTGTGATGGTTGTAAAGAGGTTTAAGCAAATGAACAATGTGGATAGAGAGGAATTCCAAGAACATATGAGAAGAATTGGAAGATTGAAACACACTAATTTGCTTCCTCTTGTGGCTTACTATTACAAAAAAGAAGAAAAACTTCTGATAACAGATTATGTTGAGAAGGGCAGCTTGGCTGTTCAACTTCATGGACATAAAGCTGTGGGACAACCAGCCCTGGATTGGCCTGCAAGATTGAAGATCGTCAAAGGCGTTGGAAAGGGTCTTCGATATCTATACAGTGAGCTTCCAAGTTTGATAACCCCACACGGCCATCTCAAGTCCTCAAATGTACTTCTAAAGGCAAATTACGAGCCCCTTCTTTCAGACTACGGCCTAATCCCGGTGGTGAACCAAGAGCATGCTCATGAACTAATGGTGGCCTACAAATCCCCGGAGTACTCGCAACAAGGTCGCATTACAAAGAAGACAGACGTATGGAGTTTTGGGCTATTGATCCTAGAAATTCTATCAGGTCAATTCCCAGCCAACTTTTTGCATCAGAACAAGAGTGGGGAAGAGGAAGATTTGGCAAGTTGGGTAAAATCAATTCCTGAAAAAGAATGGAACACCCGAGTATTTGATAAGGAAATGGGACCAAACAAGAGCAGTGAGGGTGAAATGATGAAGCTTCTAAGGATTGCAATGGCGTGTTGCGAAAGCGACTTCGAGAAACGGTTGGATTTACGAGAAGCTGTGGAGAAGATTGATGAAGTGAAAGAAAAAGATGGGGATGAAGACTTCTATTCTTCATATGCAAGTGAAGCAGATATTAGATCTTCAAGAGGATTATCTGATGAACTCAACTTCACCATGTAA 1968 42.94 MAMPFPSSSSHATGLIILIVISLEIIVSCSASTDADALLKFKSSLEISSNNDALGNWGSGGSSSSPCSGNKTNWVGILCEKGNVWGLKLENMGLKGNIDIESLEGVPHLRTLSLMNNEFEGSLPDVKRLGALKSLYLSRNHFSGNIPGDSFSNMLSLKKVHLAHNELEGQIPWSLVELHRLLELRLEGNKFSGQIPNFQQNTIKAFNLSNNDQLHGQIPPALSRLDPSSFSGIEGLCGAPLNKPCNASKVPSIGSIIMVSIAVTLALLAIGAGIVILSRCNQSSSNNEDPAHGKSPSASEQDQGAGAKSPDRGSSNGSVTGKRSADSAKLSFVREDSERFDLSDLLKASAEILGSGCFGSSYKAALTNGPVMVVKRFKQMNNVDREEFQEHMRRIGRLKHTNLLPLVAYYYKKEEKLLITDYVEKGSLAVQLHGHKAVGQPALDWPARLKIVKGVGKGLRYLYSELPSLITPHGHLKSSNVLLKANYEPLLSDYGLIPVVNQEHAHELMVAYKSPEYSQQGRITKKTDVWSFGLLILEILSGQFPANFLHQNKSGEEEDLASWVKSIPEKEWNTRVFDKEMGPNKSSEGEMMKLLRIAMACCESDFEKRLDLREAVEKIDEVKEKDGDEDFYSSYASEADIRSSRGLSDELNFTM* 656
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 26926467 26929868 + Chy2G045550.1 Chy02g02288 221736
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02288 655 MobiDBLite consensus disorder prediction 285 323 - -
Chy02g02288 655 SUPERFAMILY Protein kinase-like (PK-like) 351 619 IPR011009 -
Chy02g02288 655 Gene3D Ribonuclease Inhibitor 27 127 IPR032675 -
Chy02g02288 655 Gene3D Ribonuclease Inhibitor 128 245 IPR032675 -
Chy02g02288 655 Gene3D Phosphorylase Kinase; domain 1 314 422 - -
Chy02g02288 655 SUPERFAMILY L domain-like 66 225 - -
Chy02g02288 655 Pfam Leucine rich repeat 132 191 IPR001611 GO:0005515
Chy02g02288 655 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 15 633 - -
Chy02g02288 655 PANTHER POLLEN RECEPTOR-LIKE KINASE 5 15 633 - -
Chy02g02288 655 Pfam Protein tyrosine and serine/threonine kinase 351 618 IPR001245 GO:0004672|GO:0006468
Chy02g02288 655 Gene3D Transferase(Phosphotransferase) domain 1 423 641 - -
Chy02g02288 655 ProSiteProfiles Protein kinase domain profile. 347 632 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02288 655 Pfam Leucine rich repeat N-terminal domain 32 79 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02288 Chy-Chr2:26926467 Chy07g00710 Chy-Chr7:7011152 0 dispersed
Chy02g02288 Chy-Chr2:26926467 Chy04g00284 Chy-Chr4:2522498 2.73E-17 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71096 PF07714 PK_Tyr_Ser-Thr 8.90E-30 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02288 - - csv:101213261 1247.65