Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02318 ATGGGGAGTGGAACTCTCGTGGACGGTGTTCGTCGCTGGTTTCAACGTCGCACTTCTTCTTCTTCTTCTTCTACTTCTAATTCTAATTCTAATTTTAGCTCTAATTCTGATTCTTCTGACCCTAATCTCAATTACCCAAATCTCCACAAGTTTGATTATGTTGATAATGGTGGTGTTAGTGGTGACCAATTGTTGAGTAGCGATTTACGCGCTCAATCGTCCATTGCCCACAAACGCAAACCTCTAAGGAAACAAACCCAACTCGGAGAAGGAGGGATTCTTGAGCAATTACCTGAGGAGGAGGACGACGATCTTGATTACTTTGCCTTGAAGCTCATTAAAGGTGGGTTGGAAACTGAGTTTTTCACAGAGTATGGAGAGGCCAGCAGATACCAGGTTCAAGAAATAATCGGTAAAGGCAGCTATGGGGTTGTTGGTTCCGCTGTTGATACCCACACTGATGAGAAGGTTGCAATTAAGAAAATTAACGATGTTTTTGAGCACGTTTCTGATGCCACAAGGATTTTAAGAGAAATTAAACTCCTACGGCTGCTCCGTCATCCAGATATAGTAGAAATAAAGCACATTATGCTTCCTCCTTCACGGAGAGAATTTAGAGATATTTATGTTGTTTTTGAGTTGATGGAATCTGATCTCCACCAAGTAATTAAGGCCAATGATGATCTTACACCTGAGCACCATCAGTTTTTCTTGTATCAGCTTCTTCGTGGTCTGAAATATATTCATACAGCAAATGTATTTCATCGTGATTTAAAGCCCAAAAATATTTTAGCTAATGCTGATTGCAAACTGAAAATATGTGATTTTGGACTTGCTCGTGTATCATTTAATGATGCACCATCTGCTATTTTCTGGACTGACTACGTTGCAACTCGGTGGTATCGTGCTCCCGAACTTTGTGGCTCTTTTTTCTCAAAATACACTCCAGCAATTGATATTTGGAGCATTGGATGCATTTTTGCGGAAATGCTTACTGGAAAGCCACTGTTTCCTGGGAAAAATGTGGTGCACCAACTGGATCTGATGACTGATGTGCTTGGCACACCTTCTGCTGAGTCCATTGCTAGGATTCGTAATGAGAAGGCAAGAAGATACCTTAGTAACATGAGGAGAAAGCAGCCTGTTCCTCTCACACAAAAGTTTCCCAATGCTGATCCCTTAGCTCTCCGATTGCTTCAACGCTTGCTTGCATTTGATCCCAAAGACCGTCCCACTGCCGAAGAGGCATTAGCTGATCCGTATTTTCAAGGTTTGGCTAACGTGGATCGAGAACCATCAACACAACCAATTTCAAAACTTGAGTTTGAATTTGAGAGAAGAAAGTTAACAAAAGATGATGTTAGAGAATTAATTTATCGAGAGATATTGGAGTATCATCCTCAGATGCTACAGGAATATCTCCGCAGTGGAGAACAAACTAGCTTCATGTACCCAAGTGGTGTTGATCGCTTCAAACGCCAGTTTGCTCATCTAGAGGAACATTATGGTAAGGGTGAAAGAAGTACTCCACTTCAAAGACAGCATGCTTCATTGCCCAGGGAAAGGATTCCTGCACCAAAAGATGAAGCTGGACAACACAATGATTTAGAAGGAAGAAATGTTGCTACATCTCTTCAGAGTCCTCCAAAGTCGCAAGGGGATGGTTCCGAAAATGCAAACGGTAACGAACAAAATGGACAAAACAAGCCAAATTACAGTGCTCGTAGCTTGTTGAAGAGTGCCAGCATTAGTGCCTCTAAATGTATAGGTGTTAAACCAAGAAAAGACCTAGAGGAGGAACCGATTTCAGAGACGAATGACGAGGCAGTTGACGGAGTGTCTCATAAGATGTCAGCCTTGCGTACCTGA 1869 42.0 MGSGTLVDGVRRWFQRRTSSSSSSTSNSNSNFSSNSDSSDPNLNYPNLHKFDYVDNGGVSGDQLLSSDLRAQSSIAHKRKPLRKQTQLGEGGILEQLPEEEDDDLDYFALKLIKGGLETEFFTEYGEASRYQVQEIIGKGSYGVVGSAVDTHTDEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYVVFELMESDLHQVIKANDDLTPEHHQFFLYQLLRGLKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVSFNDAPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLMTDVLGTPSAESIARIRNEKARRYLSNMRRKQPVPLTQKFPNADPLALRLLQRLLAFDPKDRPTAEEALADPYFQGLANVDREPSTQPISKLEFEFERRKLTKDDVRELIYREILEYHPQMLQEYLRSGEQTSFMYPSGVDRFKRQFAHLEEHYGKGERSTPLQRQHASLPRERIPAPKDEAGQHNDLEGRNVATSLQSPPKSQGDGSENANGNEQNGQNKPNYSARSLLKSASISASKCIGVKPRKDLEEEPISETNDEAVDGVSHKMSALRT* 623
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27194904 27200088 + Chy2G045850.1 Chy02g02318 221766
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02318 622 MobiDBLite consensus disorder prediction 501 622 - -
Chy02g02318 622 Gene3D Phosphorylase Kinase; domain 1 147 468 - -
Chy02g02318 622 CDD STKc_TDY_MAPK 130 467 - -
Chy02g02318 622 ProSitePatterns MAP kinase signature. 166 269 IPR003527 GO:0004707|GO:0005524|GO:0006468
Chy02g02318 622 ProSiteProfiles Protein kinase domain profile. 131 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02318 622 MobiDBLite consensus disorder prediction 17 43 - -
Chy02g02318 622 SUPERFAMILY Protein kinase-like (PK-like) 126 427 IPR011009 -
Chy02g02318 622 Pfam Protein kinase domain 131 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02318 622 SMART serkin_6 131 422 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02318 622 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 556 - -
Chy02g02318 622 Gene3D Transferase(Phosphotransferase) domain 1 217 445 - -
Chy02g02318 622 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 97 556 - -
Chy02g02318 622 MobiDBLite consensus disorder prediction 537 583 - -
Chy02g02318 622 MobiDBLite consensus disorder prediction 520 535 - -
Chy02g02318 622 ProSitePatterns Protein kinases ATP-binding region signature. 137 161 IPR017441 GO:0005524
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02318 Chy12g01405 CCT
Chy02g02318 Chy12g01405 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02318 Chy-Chr2:27194904 Chy03g00689 Chy-Chr3:9434641 8.23E-116 dispersed
Chy05g00248 Chy-Chr5:2100735 Chy02g02318 Chy-Chr2:27194904 0 transposed
Chy07g01000 Chy-Chr7:14709450 Chy02g02318 Chy-Chr2:27194904 0 transposed
Chy09g00615 Chy-Chr9:7558028 Chy02g02318 Chy-Chr2:27194904 3.94E-20 transposed
Chy10g00144 Chy-Chr10:3841547 Chy02g02318 Chy-Chr2:27194904 0 transposed
Chy11g01004 Chy-Chr11:14174479 Chy02g02318 Chy-Chr2:27194904 0 transposed
Chy11g01438 Chy-Chr11:21183907 Chy02g02318 Chy-Chr2:27194904 0 transposed
Chy12g01600 Chy-Chr12:19550025 Chy02g02318 Chy-Chr2:27194904 2.55E-26 transposed
Chy12g01405 Chy-Chr12:18170850 Chy02g02318 Chy-Chr2:27194904 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71098 PF00069 Pkinase 1.60E-68 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02318 - - csv:101219068 1152.5