Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g02320 | ATGCAAATGGCTGGAGGTGATCAAGCAGATATGGCAGTTCACTCTCTTGGATCTAAACTTTCTTTAATTTCAGACCATGAACCTGAAAAATGTGGCAATAATAATGTCACCAATAATCACCAACAAAGACCTTGCTTTGATCCTTCTCTTGTTTCTCCCAAGGTCGTACCGCCTATCTCCGTGGCTGCAGAGAGTGATCAAGCTCTTCGTCGGCCTCGAGGGCGGCCAGCTGGGTCCAAAAACAAGCCTAAACCACCCATTATTGTTACCCGAGATAGCGCTAATGCACTACGAGCCCATGCCATTGAGGTTAGCACTGGGTGTGATGTCAATGAGAGCCTCTCCAACTTCGCTCGGAGGAAGCAGCGTGGCGTCTGCATTCTTAGCGGTAGTGGGTGTGTCACTAATGTCACGCTTCGCCAAGCTGCTTCCTCTGGTGCCATTGTCACTCTACATGGCCGTTTTGAGATTCTTTCAATGTTGGGGTCGATCTTACCACCACCAGCACCGTCGGGAATCACTGGGCTGACAATTTACTTGTCCGGCGCACAAGGGCAGGTGGTCGGTGGCGTCGTAGTGGGAGCGCTCATTGCTTCCGGTCCAGTTGTGATCATGGCAGCAACGTTCATGAACGCGACATTCGACCGTCTGCCATCTGACGACGAAGAAGTGGCGGCCACCATGCAGAGTCAACATTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCAGATCTGTATGGAGTGCCACAAAATTTGATCACCAATAGCAGTCTTCCGCCAGAATTATACTCTTGGGCGGCGGCTGGAAGAACCATGTCAAAGACTTAA | 837 | 51.02 | MQMAGGDQADMAVHSLGSKLSLISDHEPEKCGNNNVTNNHQQRPCFDPSLVSPKVVPPISVAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSTGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPAPSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATMQSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYSWAAAGRTMSKT* | 279 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 27206468 | 27207547 | + | Chy2G045870.1 | Chy02g02320 | 221768 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g02320 | 278 | SUPERFAMILY | AF0104/ALDC/Ptd012-like | 94 | 225 | - | - | |
Chy02g02320 | 278 | Pfam | Plants and Prokaryotes Conserved (PCC) domain | 98 | 210 | IPR005175 | - | |
Chy02g02320 | 278 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 | 47 | 277 | IPR014476 | GO:0003680 | |
Chy02g02320 | 278 | MobiDBLite | consensus disorder prediction | 28 | 46 | - | - | |
Chy02g02320 | 278 | ProSiteProfiles | PPC domain profile profile. | 94 | 231 | IPR005175 | - | |
Chy02g02320 | 278 | Gene3D | - | 97 | 233 | - | - | |
Chy02g02320 | 278 | MobiDBLite | consensus disorder prediction | 61 | 87 | - | - | |
Chy02g02320 | 278 | CDD | DUF296 | 98 | 181 | IPR005175 | - | |
Chy02g02320 | 278 | PANTHER | AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 | 47 | 277 | - | - | |
Chy02g02320 | 278 | MobiDBLite | consensus disorder prediction | 24 | 49 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02320 | Chy-Chr2:27206468 | Chy11g01953 | Chy-Chr11:25567509 | 1.41E-66 | dispersed | |
Chy02g02320 | Chy-Chr2:27206468 | Chy06g00280 | Chy-Chr6:1884621 | 5.02E-74 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g02320 | - | - | csv:101219306 | 540.421 |