Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02320 ATGCAAATGGCTGGAGGTGATCAAGCAGATATGGCAGTTCACTCTCTTGGATCTAAACTTTCTTTAATTTCAGACCATGAACCTGAAAAATGTGGCAATAATAATGTCACCAATAATCACCAACAAAGACCTTGCTTTGATCCTTCTCTTGTTTCTCCCAAGGTCGTACCGCCTATCTCCGTGGCTGCAGAGAGTGATCAAGCTCTTCGTCGGCCTCGAGGGCGGCCAGCTGGGTCCAAAAACAAGCCTAAACCACCCATTATTGTTACCCGAGATAGCGCTAATGCACTACGAGCCCATGCCATTGAGGTTAGCACTGGGTGTGATGTCAATGAGAGCCTCTCCAACTTCGCTCGGAGGAAGCAGCGTGGCGTCTGCATTCTTAGCGGTAGTGGGTGTGTCACTAATGTCACGCTTCGCCAAGCTGCTTCCTCTGGTGCCATTGTCACTCTACATGGCCGTTTTGAGATTCTTTCAATGTTGGGGTCGATCTTACCACCACCAGCACCGTCGGGAATCACTGGGCTGACAATTTACTTGTCCGGCGCACAAGGGCAGGTGGTCGGTGGCGTCGTAGTGGGAGCGCTCATTGCTTCCGGTCCAGTTGTGATCATGGCAGCAACGTTCATGAACGCGACATTCGACCGTCTGCCATCTGACGACGAAGAAGTGGCGGCCACCATGCAGAGTCAACATTACGGCCAAAATGGGCGGAGCCACCACCACCTGGATGTTTCAGATCTGTATGGAGTGCCACAAAATTTGATCACCAATAGCAGTCTTCCGCCAGAATTATACTCTTGGGCGGCGGCTGGAAGAACCATGTCAAAGACTTAA 837 51.02 MQMAGGDQADMAVHSLGSKLSLISDHEPEKCGNNNVTNNHQQRPCFDPSLVSPKVVPPISVAAESDQALRRPRGRPAGSKNKPKPPIIVTRDSANALRAHAIEVSTGCDVNESLSNFARRKQRGVCILSGSGCVTNVTLRQAASSGAIVTLHGRFEILSMLGSILPPPAPSGITGLTIYLSGAQGQVVGGVVVGALIASGPVVIMAATFMNATFDRLPSDDEEVAATMQSQHYGQNGRSHHHLDVSDLYGVPQNLITNSSLPPELYSWAAAGRTMSKT* 279
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27206468 27207547 + Chy2G045870.1 Chy02g02320 221768
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02320 278 SUPERFAMILY AF0104/ALDC/Ptd012-like 94 225 - -
Chy02g02320 278 Pfam Plants and Prokaryotes Conserved (PCC) domain 98 210 IPR005175 -
Chy02g02320 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 47 277 IPR014476 GO:0003680
Chy02g02320 278 MobiDBLite consensus disorder prediction 28 46 - -
Chy02g02320 278 ProSiteProfiles PPC domain profile profile. 94 231 IPR005175 -
Chy02g02320 278 Gene3D - 97 233 - -
Chy02g02320 278 MobiDBLite consensus disorder prediction 61 87 - -
Chy02g02320 278 CDD DUF296 98 181 IPR005175 -
Chy02g02320 278 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 16 47 277 - -
Chy02g02320 278 MobiDBLite consensus disorder prediction 24 49 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02320 Chy-Chr2:27206468 Chy11g01953 Chy-Chr11:25567509 1.41E-66 dispersed
Chy02g02320 Chy-Chr2:27206468 Chy06g00280 Chy-Chr6:1884621 5.02E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02320 - - csv:101219306 540.421