Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02329 ATGGCTGACCTCGATCCATCAAAGAAAGTGGCTGATAGATATTTAAAGCGTGAGGTTCTTGGAGAGGGTACCTATGGTGTTGTATATAAAGCCATTGATACTCAGACAGGTCAGACGGTTGCAATCAAGAAAATTCGGCTTGGGAAACAAAAAGAGGGAGTAAATTTTACGGCTCTTCGAGAAATCAAGCTGCTTAAAGAGCTAAAAGATTCAAATATAATTGAGTTAATTGATGCATTCCCTCACAAAGGGAATTTGCATCTTGTATTTGAATTTATGGAGACAGACCTTGAAGCTGTTATACGTGATCGAAACATATTTCTTTCCCCAGCTGACATCAAATCATACCTTCAGATGACGTTGAAAGGCCTTGCATATTGCCACAAGAAATGGGTTTTGCATAGGGATATGAAGCCAAATAATTTGTTGATAGGATCAAATGGTCAACTGAAACTTGCGGATTTTGGTTTGGCTCGGATATTTGGGAGTCCGGATCGTAGATTTACTCACCAGGTGTTTGCTCGATGGTACAGAGCACCTGAGCTATTGTTTGGTACTAAGCAATATGGTTCTGCAGTGGATGTTTGGGCAGCAGCTTGTATTTTTGCTGAACTACTACTTCGTAGACCTTTTCTTCAGGGTTCAAGTGACATTGATCAATTAGGGAAGATTTTTGCAGCGTTTGGAACGCCTACGCCTTCACAATGGCCTGATATGTTATACCTACCTGATTACGTTGAGTTCCAATATGTCCCTGCACCTCCTCTAAGATCATTGTTTCCTGTGGCTAGTGATGACACACTGGATCTCCTATCAAAGATGTTTGCATATGATCCAAAATCTAGAATTACCATTCAACAAGCATTGGAGCATAGGTACTTCACATCTGCACCACTTCCCACAGATCCTAGTAAGCTTCCAAGGCCTACTTCAAAGCGTGAACCTACGAACTCGAACTCTCGAGTTTTCGATTTAAATTCAAATGATGGTCCTACTGTACTCTCACCTCCAAGAAAGTCAAGAAGAGTAATGCCAGATCGTGAGGCTTTTGAAGGCAATGCATATAGATCTGATAGGCTTGATGACCATGTTAATGAGGTGCGAGAGTTAGCTGCTGGAAATACGAGCAAGAATGAAGCAGCTCCTATGTCGTTGGATTTTTCTGTATTTGGTGGAAAACCTCCAAATAGACCTACAATTAACAGTGCTGACAGATCACATCTTAAAAGGAAATTAGATCTTGAATTCCAGCAATAA 1257 40.89 MADLDPSKKVADRYLKREVLGEGTYGVVYKAIDTQTGQTVAIKKIRLGKQKEGVNFTALREIKLLKELKDSNIIELIDAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMTLKGLAYCHKKWVLHRDMKPNNLLIGSNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAPELLFGTKQYGSAVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMLYLPDYVEFQYVPAPPLRSLFPVASDDTLDLLSKMFAYDPKSRITIQQALEHRYFTSAPLPTDPSKLPRPTSKREPTNSNSRVFDLNSNDGPTVLSPPRKSRRVMPDREAFEGNAYRSDRLDDHVNEVRELAAGNTSKNEAAPMSLDFSVFGGKPPNRPTINSADRSHLKRKLDLEFQQ* 419
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27266747 27270855 - Chy2G045960.1 Chy02g02329 221777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02329 418 CDD STKc_CDK7 13 307 IPR037770 GO:0005675|GO:0008353|GO:0070985
Chy02g02329 418 ProSiteProfiles Protein kinase domain profile. 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02329 418 Pfam Protein kinase domain 16 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02329 418 ProSitePatterns Serine/Threonine protein kinases active-site signature. 132 144 IPR008271 GO:0004672|GO:0006468
Chy02g02329 418 MobiDBLite consensus disorder prediction 372 418 - -
Chy02g02329 418 Gene3D Transferase(Phosphotransferase) domain 1 95 310 - -
Chy02g02329 418 SUPERFAMILY Protein kinase-like (PK-like) 10 301 IPR011009 -
Chy02g02329 418 MobiDBLite consensus disorder prediction 340 357 - -
Chy02g02329 418 MobiDBLite consensus disorder prediction 403 418 - -
Chy02g02329 418 PANTHER CYCLIN-DEPENDENT KINASE D-2 9 362 - -
Chy02g02329 418 MobiDBLite consensus disorder prediction 294 357 - -
Chy02g02329 418 PANTHER CELL DIVISION PROTEIN KINASE 9 362 - -
Chy02g02329 418 Gene3D Phosphorylase Kinase; domain 1 10 94 - -
Chy02g02329 418 SMART serkin_6 14 294 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02329 418 MobiDBLite consensus disorder prediction 310 334 - -
Chy02g02329 418 ProSitePatterns Protein kinases ATP-binding region signature. 20 44 IPR017441 GO:0005524
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02329 Chy-Chr2:27266747 Chy10g01254 Chy-Chr10:17096948 1.35E-89 dispersed
Chy05g01377 Chy-Chr5:17852764 Chy02g02329 Chy-Chr2:27266747 5.13E-21 dispersed
Chy02g02329 Chy-Chr2:27266747 Chy10g00800 Chy-Chr10:14033232 8.29E-81 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71099 PF00069 Pkinase 1.80E-72 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02329 K02202 - csv:101217645 839.336