Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02353 ATGGCGACGCCGTTGACAGGGCTACAGCATAGGGACGGTGGTGGAGGAGTGGCCTTTTTGGCTAATTCTGTAAATAAAATGGATTCCGCTTCGTCTCCGTCCTCGCCTAATGATTGTTTGAGGAGTTCTCAGCCACAGTCTCCGATTCTTATTTTCCTCTTCTTCCACAAAGCAATTCGTAATGAGCTTGATACGCTTCACCGGTTGGCTATGGCGTTTGCCACAGGGCAGAGAGCAGATATTCGGCCGCTATTTGAACGATACCATTTTTTGAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATTTTTCCTGCCCTTGATATTCGTGTGAAGAATGTGGCACAGACATATTCCCTTGAACACAAGGGTGAAAGCAATTTGTTTGATCATCTTTTTGAGCTTCTTAATTGTAATACACAAAATGATGAAAGTTTCCCAAGGGAGTTAGCGTCCTGCACTGGTGCCCTAAAGACATCTGTGAGCCAGCACATGGCCAAGGAAGAAGAGCAGGTATTTCCCTTGCTTATAGAAAAGTTCTCCCTGGAAGAGCAAGCATCTCTCGTTTGGCAGTTCTTTTGCAGTATTCCTGTGTACATGATGGCTCAATTCCTCCCTTGGCTTTCATCATCTGTTTCATCTGATGAATTTCAGGATCTACAGAAATGTTTAATTCAAGTAGTCCCTGAGGAAAAGCTTCTCCAACAGGTCATATTTACTTGGATGGAAGCGAGAAGTTGCGGCGATGTATCAACAAGTTGTTTCAGTGATTCTCTAGTTGAATATCATTCAGATCCTACTACTGATACATCAAATCATCAAACGGAAAATGTAAATTGTGCTTGTGCATTGACGAGCCCTGGAAAAAGAAAATACGTAGAGTCAAGTGCTGATATATCGGATTATGTGGCAACTCATCCAATCAATGAAATACTGTTCTGGCACAATGCCATCAAAAGAGAGTTGAATGAAATAGCTGAGGAAGCTAGGAAGATACAACTTTCTGGGAACTTTAGTAATCTATCAACTTTTAACGAGAGGTTGCAATTCATTGCTGAAGTTTGCATATTTCATAGTATTGCTGAGGACAAGGTAATCTTTCCTGCAGTAGATGGAGAGTTTTCTTTTCTCCAGGAGCATGCCGAAGAAGAAAGTCAATTCAATGAGTTTAGGTGCCTGATTGAAAATATTCAAAGTGCAGGGGCTAGTTCTACTTCAAGAGCTGAGTTTTACGTGAAGTTGTGTTCTCATGCTGATCAAATAATGGATACCATTAAAAGGCACTTCCATAATGAAGAAGTTCAGGTTCTTCCACTTGCTAGAAAGCACTTCAGTTTCAAGAGGCAACGGGAATTGTTATATCAAAGTTTGTGCATGATGCCTTTGAAATTGATTGAACGTGTCTTGCCATGGTTGGTAGGATCGGTGAAAGAAGATGAAGCTAGAGATATCCTCAAGAACATTCAGTTGGCAGCTCCAGCTAAGGATACTGCTCTGGTGACACTCTTTTCTGGTTGGGCCTGCAAAGCCCGTAATAATGGTTTGTGCTTGTCTTCGAGAGCAGTTGGCTGTTGTGCAGTTAAAAGGCTTACTGACATTGAAGAAGACATTGTTCAATCATCTTGTTCATGTGCCCCTGCATTGGCTGCAAGGGAAGGTCCAAAATCAGATAACGAAACTAATGCTAATGTCAAGAGGCTCACCATACGAAATGTACCATTGCCATGTGGAAGCTGTGATGGCCGTATTGCTTCAGAGACTGTTAATGTCCAGAAACAGTGTTGTAGTGATCAGTCCTGCCGTGTTCCAGCTTTGGGAGTAAACATCAAGAATCTGGGGTTAAGTTCTATTTTCACATCCAAGTCTATGAGATCCTTATCTCCCAGCTCTTGTGCACCATCTCTCAACTCCAGCCTTTTCTCATGGGAAACGGATTGTGGCTCTTCTGATGTTGGGTCTGCAGGACGTCCAATTGATACTATTTTTAAATTTCACAAAGCTATACGCAAAGACTTGGAATATTTAGATGTTGAATCTGGAAAACTTAGTGATTGTGATGGAACATTTCTCCGGCCATTTATTGGAAGATTTCGCCTTCTATGGGGGTTATATAGAGCACATAGTAATGCTGAAGATGATATTGTATTTCCTGCTCTGGAATCCAAAGAGACATTGCACAATGTAAGTCACTCATATACACTAGACCATAAGCAGGAGGAAAAATTATTTGAGGACATTTCGTGTGTTCTCTCTGAGATTTCAGTCCTCCATGAAAGTTTGCATGAGGTTCCGTTGGATGGGAATTTTTCCAGAAGTGTTGTTGGGTCCATTAATATGGTGGGGAAGGATTGTAATAGAAAGTACAACGAGCTTGCTACAAAGCTTCAAGGAATGTGCAAATCTATAAGAGTTACTCTGGATCAGCATATATATAGGGAAGAACTTGAACTTTGGCCGCTGTTTGGAAAACACTTCTCAGTGGAAGAGCAAGATAAAATAGTTGGCCGTATCATTGGAACCACAGGTGCTGAAGTTCTCCAGTCAATGTTGCCATGGGTAACATCAGCACTTACCCAGGACGAACAGAATACTTTGATGGATACATGGAAGCAGGCCACAAAAAACACTATGTTCAATGAATGGCTCAATGAATGTTGGAGAGGGACTGCTTCGTCTACCATAAATGGTGAAACATTGGAAGCTTGTGTGGCTGAAAAAGATTCTGGGCTCATTGAGAGCTTGGACCAAAATGATCAAATGTTCAAGCCTGGTTGGAAAGATATTTTCCGCATGAACCAAAATGAACTTGAATCAGAAATCAGAAAGGTTTATCAGGACTCGACTCTTGATCCAAGGAGAAAAGCATATCTCGTGCAGAATCTTATGACCAGTCGATGGATTGCTGCACAGCAGAAATTACCTCAAGCGAATATAGAAGATAATTCCAATGGTGAAGATGTAACAGGACGAACGGCATCTTTTCGCTGTGCGGAGAAAAAAGAGTTCGGGTGTGAACATTACAAAAGAAACTGCAAGCTTCTTGCTGCTTGCTGTGGAAAGTTATTTACCTGTCGATTCTGTCATGACAATGTCAGCGACCACTCAATGGACAGGAAAGCAACATCAGAGATGATGTGTATGAACTGCCTAACTATCCAACCAGTTGGGTCAATATGCACAACACCTTCTTGCAATGGATTATCAATGGCGAAATACTATTGTAATATTTGCAAATTTTTTGACGATGAAAGGGCTGTGTATCATTGCCCATTTTGCAACTTATGCCGTGTTGGGAAGGGTCTTGGGATTGATTTTTTCCATTGCATGATTTGCAATTGTTGCCTTGGGATAAAGCTGGAGAGCCATAAGTGCCTGGAGAAAAGTTTAGAAACGAATTGTCCCATCTGCTGTGATTTCTTATTTACATCCAGTGCAACAGTCAGACCACTACCCTGTGGTCATTACATGCATTCAGCCTGCTTTCAGGCGTACACTTGCAGCCATTATACCTGTCCTATTTGTAGCAAGTCCTTGGGAGATATGGCGGTTTATTTCGGCATGCTTGACGCCTTGTTGGCTGCTGAGGAGCTGCCAGAAGAGTACAGGGATCGTTGCCAGGACATATTGTGCAATGACTGCGAGGGGAAAGGCACATCACGATTCCATTGGCTATATCATAAATGTGGGTTTTGTGGATCATACAACACTCGGAATCGCAGCATAGCAAGCTCCGAATCATCAATCAAGCTCATGTCTATTCCGCCTGATAGATCAAACCCACTTCACAACTTCTCTTTGCCGTGTCTCAAATGGGGTTCTCAAAGATTCCTCAAGTGTATGAAGGTTTCTTCAAACTCCAACCCTTCTACCGTTGATCATCCTTCTGTTAATCGCCAATCGAAATCTTATCAATTTCGTGCCAGACCCATTAATTCTAAGGCTATGAACTTCACCAAGGTTACTTCTCCGATGAACACGATTCATTCCAAACAGAAACCAACCCACAATCGAAGCAGTTATATTGAAATCATGCGAGAGAAGATCATGCTTGATATTAGGGAGGAATCGAAGAGACTTAAATTTTCAATTGCTGATGAAGGGGGTGAGGATGAATCTGCTGCGGCTCGACCGTGGAATTTGAGGACTCGTAGAGCAGCTTGTAAGGCTCCTCTAGATGAGAGGAATCTGGAATTGGGTTCTTCTTCAACCAAGGCTACAATGAAAAAGAAGGAGAAGAATCGGACAGCGTTAATTGTCTCGTTGTCGAAAGAGGAGCTTGAAGAGGATTTTGCGGTACTGGTTGGTAGACTACCGAGGAGGCCAAAGAAGAGGCCAAGAGCAGTACAAAAGCAAATGGATGCACTGTTTCCGGGGTTGTTACTGACTGAAATTACTCTAGATTCATATAAAGTTGAAGATGTTCCTGAAGCTTGA 4443 42.29 MATPLTGLQHRDGGGGVAFLANSVNKMDSASSPSSPNDCLRSSQPQSPILIFLFFHKAIRNELDTLHRLAMAFATGQRADIRPLFERYHFLRSIYKHHSNAEDEVIFPALDIRVKNVAQTYSLEHKGESNLFDHLFELLNCNTQNDESFPRELASCTGALKTSVSQHMAKEEEQVFPLLIEKFSLEEQASLVWQFFCSIPVYMMAQFLPWLSSSVSSDEFQDLQKCLIQVVPEEKLLQQVIFTWMEARSCGDVSTSCFSDSLVEYHSDPTTDTSNHQTENVNCACALTSPGKRKYVESSADISDYVATHPINEILFWHNAIKRELNEIAEEARKIQLSGNFSNLSTFNERLQFIAEVCIFHSIAEDKVIFPAVDGEFSFLQEHAEEESQFNEFRCLIENIQSAGASSTSRAEFYVKLCSHADQIMDTIKRHFHNEEVQVLPLARKHFSFKRQRELLYQSLCMMPLKLIERVLPWLVGSVKEDEARDILKNIQLAAPAKDTALVTLFSGWACKARNNGLCLSSRAVGCCAVKRLTDIEEDIVQSSCSCAPALAAREGPKSDNETNANVKRLTIRNVPLPCGSCDGRIASETVNVQKQCCSDQSCRVPALGVNIKNLGLSSIFTSKSMRSLSPSSCAPSLNSSLFSWETDCGSSDVGSAGRPIDTIFKFHKAIRKDLEYLDVESGKLSDCDGTFLRPFIGRFRLLWGLYRAHSNAEDDIVFPALESKETLHNVSHSYTLDHKQEEKLFEDISCVLSEISVLHESLHEVPLDGNFSRSVVGSINMVGKDCNRKYNELATKLQGMCKSIRVTLDQHIYREELELWPLFGKHFSVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNTLMDTWKQATKNTMFNEWLNECWRGTASSTINGETLEACVAEKDSGLIESLDQNDQMFKPGWKDIFRMNQNELESEIRKVYQDSTLDPRRKAYLVQNLMTSRWIAAQQKLPQANIEDNSNGEDVTGRTASFRCAEKKEFGCEHYKRNCKLLAACCGKLFTCRFCHDNVSDHSMDRKATSEMMCMNCLTIQPVGSICTTPSCNGLSMAKYYCNICKFFDDERAVYHCPFCNLCRVGKGLGIDFFHCMICNCCLGIKLESHKCLEKSLETNCPICCDFLFTSSATVRPLPCGHYMHSACFQAYTCSHYTCPICSKSLGDMAVYFGMLDALLAAEELPEEYRDRCQDILCNDCEGKGTSRFHWLYHKCGFCGSYNTRNRSIASSESSIKLMSIPPDRSNPLHNFSLPCLKWGSQRFLKCMKVSSNSNPSTVDHPSVNRQSKSYQFRARPINSKAMNFTKVTSPMNTIHSKQKPTHNRSSYIEIMREKIMLDIREESKRLKFSIADEGGEDESAAARPWNLRTRRAACKAPLDERNLELGSSSTKATMKKKEKNRTALIVSLSKEELEEDFAVLVGRLPRRPKKRPRAVQKQMDALFPGLLLTEITLDSYKVEDVPEA* 1481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27414126 27426859 + Chy2G046200.1 Chy02g02353 221801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02353 1480 ProSiteProfiles Zinc finger CHY-type profile. 1000 1069 IPR008913 GO:0008270
Chy02g02353 1480 CDD Hr-like 51 177 - -
Chy02g02353 1480 Gene3D nmb1532 protein domain like 312 459 - -
Chy02g02353 1480 Gene3D nmb1532 protein domain like 46 196 - -
Chy02g02353 1480 SUPERFAMILY Zinc hairpin stack 1073 1129 IPR037275 -
Chy02g02353 1480 ProSiteProfiles Zinc finger RING-type profile. 1136 1178 IPR001841 -
Chy02g02353 1480 Pfam Hemerythrin HHE cation binding domain 53 179 IPR012312 -
Chy02g02353 1480 Pfam Hemerythrin HHE cation binding domain 660 823 IPR012312 -
Chy02g02353 1480 Pfam Hemerythrin HHE cation binding domain 309 443 IPR012312 -
Chy02g02353 1480 Pfam Zinc-ribbon 1183 1240 IPR039512 -
Chy02g02353 1480 PANTHER RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 30 1249 - -
Chy02g02353 1480 SUPERFAMILY RING/U-box 1135 1181 - -
Chy02g02353 1480 SUPERFAMILY CHY zinc finger-like 1001 1063 IPR037274 GO:0008270
Chy02g02353 1480 CDD Hr-like 662 822 - -
Chy02g02353 1480 Gene3D - 1207 1247 - -
Chy02g02353 1480 SMART ring_2 1136 1177 IPR001841 -
Chy02g02353 1480 Pfam CHY zinc finger 1007 1082 IPR008913 GO:0008270
Chy02g02353 1480 Pfam Protein of unknown function (DUF1639) 1424 1472 IPR012438 -
Chy02g02353 1480 Gene3D nmb1532 protein domain like 655 886 - -
Chy02g02353 1480 CDD RING-H2_Pirh2 1135 1178 - -
Chy02g02353 1480 CDD Hr-like 313 441 - -
Chy02g02353 1480 ProSiteProfiles Zinc finger CTCHY-type profile. 1072 1135 IPR017921 -
Chy02g02353 1480 PANTHER CHY ZINC FINGER PROTEIN 30 1249 - -
Chy02g02353 1480 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1129 1180 IPR013083 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02353 Chy-Chr2:27414126 Chy06g00663 Chy-Chr6:4535585 4.10E-53 dispersed
Chy04g01385 Chy-Chr4:20472856 Chy02g02353 Chy-Chr2:27414126 5.57E-08 dispersed
Chy02g02526 Chy-Chr2:28617235 Chy02g02353 Chy-Chr2:27414126 1.87E-10 transposed
Chy09g01063 Chy-Chr9:13029798 Chy02g02353 Chy-Chr2:27414126 2.99E-23 transposed
Chy10g01165 Chy-Chr10:16507098 Chy02g02353 Chy-Chr2:27414126 6.21E-20 transposed
Chy10g01161 Chy-Chr10:16467587 Chy02g02353 Chy-Chr2:27414126 1.84E-36 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02353 K16276 - csv:101215023 2503.01