Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02357 ATGGCTGATCATGATTTCCCTTCCTCTTTCCCTCTTGAAGATCCAAATTTAGAACTCATGGCTTCTCATTTCTCCTCTTCAATTCCCAATTTCACTCACTTTTTGCCATTCTCCACCACTAATACAGAAATATTTTCACAATTTCCACCAAATTTCCCACAAAATAATGCTACTTCTTTTACTACTTCCCCTGTTTTGCCTTCTCACTCTGTTTTCCCACCTGCTCCTACTCCCTCCGTTTCTACTACTACTCATCACCACTTCCATGATATCAATAACAAGAGAAAATCTATGCCTATGGATGTTTCCGAAAGTACTTCTGGGATTTCCACTCCTCAAGTTTCTGAATCTGGCTTCAACACTAAATATAGCTCTGGGAAAGGGAAGAGGTTGAAAAGCTTAGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCCACTGATAGCCACAGTTTAGCTGAAAGGGTGAGAAGAGGAAAAATCAATGAAAGACTAAGATGCTTGAAAGACATTGTCCCAGGATGCTACAAGACCATGGGCATGGCAGTAATGTTGGATGAGATAATTAACTATGTCCAGTCTCTACAGAATCAAGTGGAGTTCCTATCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTCAACTCAGAGGCAGATGCCATATCAAAATTACAAAGGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAAGGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATTTGCCTCTTTGA 798 40.6 MADHDFPSSFPLEDPNLELMASHFSSSIPNFTHFLPFSTTNTEIFSQFPPNFPQNNATSFTTSPVLPSHSVFPPAPTPSVSTTTHHHFHDINNKRKSMPMDVSESTSGISTPQVSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKAHEAKELERLMKEGYGGIACFHSNLPL* 266
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27456766 27458322 + Chy2G046240.1 Chy02g02357 221805
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02357 265 CDD bHLH_AtBPE_like 144 229 - -
Chy02g02357 265 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 8 264 IPR024097 GO:0006355
Chy02g02357 265 Coils Coil 231 251 - -
Chy02g02357 265 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 222 IPR036638 GO:0046983
Chy02g02357 265 SMART finulus 160 210 IPR011598 GO:0046983
Chy02g02357 265 Coils Coil 131 151 - -
Chy02g02357 265 PANTHER TRANSCRIPTION FACTOR BEE 1 8 264 - -
Chy02g02357 265 MobiDBLite consensus disorder prediction 128 160 - -
Chy02g02357 265 Pfam Helix-loop-helix DNA-binding domain 158 205 IPR011598 GO:0046983
Chy02g02357 265 MobiDBLite consensus disorder prediction 97 160 - -
Chy02g02357 265 Gene3D - 149 222 IPR036638 GO:0046983
Chy02g02357 265 MobiDBLite consensus disorder prediction 98 127 - -
Chy02g02357 265 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 154 204 IPR011598 GO:0046983
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02357 Chy12g01438 CCT
Chy02g02357 Chy12g01438 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02357 Chy-Chr2:27456766 Chy09g00423 Chy-Chr9:3739941 1.35E-37 dispersed
Chy06g01369 Chy-Chr6:13778461 Chy02g02357 Chy-Chr2:27456766 6.50E-45 transposed
Chy12g01438 Chy-Chr12:18379377 Chy02g02357 Chy-Chr2:27456766 1.49E-70 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17589 PF00010 HLH 4.50E-05 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02357 - - csv:101209353 493.812