Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g02357 | ATGGCTGATCATGATTTCCCTTCCTCTTTCCCTCTTGAAGATCCAAATTTAGAACTCATGGCTTCTCATTTCTCCTCTTCAATTCCCAATTTCACTCACTTTTTGCCATTCTCCACCACTAATACAGAAATATTTTCACAATTTCCACCAAATTTCCCACAAAATAATGCTACTTCTTTTACTACTTCCCCTGTTTTGCCTTCTCACTCTGTTTTCCCACCTGCTCCTACTCCCTCCGTTTCTACTACTACTCATCACCACTTCCATGATATCAATAACAAGAGAAAATCTATGCCTATGGATGTTTCCGAAAGTACTTCTGGGATTTCCACTCCTCAAGTTTCTGAATCTGGCTTCAACACTAAATATAGCTCTGGGAAAGGGAAGAGGTTGAAAAGCTTAGAGAAAGAAGAGGAGAAATCAACTAGAGAAGTGGTTCATGTTAGAGCTAGAAGAGGCCAAGCCACTGATAGCCACAGTTTAGCTGAAAGGGTGAGAAGAGGAAAAATCAATGAAAGACTAAGATGCTTGAAAGACATTGTCCCAGGATGCTACAAGACCATGGGCATGGCAGTAATGTTGGATGAGATAATTAACTATGTCCAGTCTCTACAGAATCAAGTGGAGTTCCTATCCATGAAACTTGCTGCAGCTAGCTCTTTCTATGACTTCAACTCAGAGGCAGATGCCATATCAAAATTACAAAGGGCAAAGGCACATGAAGCAAAAGAATTGGAGAGATTGATGAAGGAAGGATATGGAGGAATAGCTTGCTTCCACTCAAATTTGCCTCTTTGA | 798 | 40.6 | MADHDFPSSFPLEDPNLELMASHFSSSIPNFTHFLPFSTTNTEIFSQFPPNFPQNNATSFTTSPVLPSHSVFPPAPTPSVSTTTHHHFHDINNKRKSMPMDVSESTSGISTPQVSESGFNTKYSSGKGKRLKSLEKEEEKSTREVVHVRARRGQATDSHSLAERVRRGKINERLRCLKDIVPGCYKTMGMAVMLDEIINYVQSLQNQVEFLSMKLAAASSFYDFNSEADAISKLQRAKAHEAKELERLMKEGYGGIACFHSNLPL* | 266 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 27456766 | 27458322 | + | Chy2G046240.1 | Chy02g02357 | 221805 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g02357 | 265 | CDD | bHLH_AtBPE_like | 144 | 229 | - | - | |
Chy02g02357 | 265 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 8 | 264 | IPR024097 | GO:0006355 | |
Chy02g02357 | 265 | Coils | Coil | 231 | 251 | - | - | |
Chy02g02357 | 265 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 152 | 222 | IPR036638 | GO:0046983 | |
Chy02g02357 | 265 | SMART | finulus | 160 | 210 | IPR011598 | GO:0046983 | |
Chy02g02357 | 265 | Coils | Coil | 131 | 151 | - | - | |
Chy02g02357 | 265 | PANTHER | TRANSCRIPTION FACTOR BEE 1 | 8 | 264 | - | - | |
Chy02g02357 | 265 | MobiDBLite | consensus disorder prediction | 128 | 160 | - | - | |
Chy02g02357 | 265 | Pfam | Helix-loop-helix DNA-binding domain | 158 | 205 | IPR011598 | GO:0046983 | |
Chy02g02357 | 265 | MobiDBLite | consensus disorder prediction | 97 | 160 | - | - | |
Chy02g02357 | 265 | Gene3D | - | 149 | 222 | IPR036638 | GO:0046983 | |
Chy02g02357 | 265 | MobiDBLite | consensus disorder prediction | 98 | 127 | - | - | |
Chy02g02357 | 265 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 154 | 204 | IPR011598 | GO:0046983 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g02357 | Chy12g01438 | CCT | |
Chy02g02357 | Chy12g01438 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02357 | Chy-Chr2:27456766 | Chy09g00423 | Chy-Chr9:3739941 | 1.35E-37 | dispersed | |
Chy06g01369 | Chy-Chr6:13778461 | Chy02g02357 | Chy-Chr2:27456766 | 6.50E-45 | transposed | |
Chy12g01438 | Chy-Chr12:18379377 | Chy02g02357 | Chy-Chr2:27456766 | 1.49E-70 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17589 | PF00010 | HLH | 4.50E-05 | No_clan | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g02357 | - | - | csv:101209353 | 493.812 |