Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02365 ATGCGTATGAGCTGTAATGGATGCCGTGTTCTTCGTAAAGGTTGCAGTGAGAGCTGCTCCATCAGACCATGTCTTCAGTGGATCAAATCCCCTCAATCCCAAGCCAACGCCACTTTCTTCCTCGCCAAATTCTACGGCCGAGCTGGTCTCGTTAACCTCATCAATGCTGGCCCGGACCATCTCCGCCCAGCTATTTTCAAATCTTTGCTATTCGAAGCGTGTGGCCGGATCGTGAATCCCATCTTTGGGACGGCTGGATTGTTGTGGTCTGGGAGCTGGCAGCTTTGTCAGGACGCAGTCGAAGCTGTTCTGAAAGGCGCACCGATTCTGCCGGTTTCTTCTGAAACGGCAGCGTCGCACATGGGTCCACCTTTAAAAGGCTGTGATATCCGCCATGTTTCCAAACAGCAAGACTCAGCCTCCGGTTCAGCGGTTAGGAAGATCAAGACACGACGGCGGTTCAAACGGTCTGGGACGGCGAAGTTGAAGCCGAAAGAGGAGCCGGGTGTGGTGGTGGTACCCGAGTTCACATTTGATGACCAAACCCAGATTGTGTCGGAACCCCAGTGTCTGAAGTTTGAGCTGGATAATTGGAAGGGTCGTGAGTCGCCGGAGAAAGACTGCGGTAGCGACGATACAGAGTGCCTGTCGGTGGAGAGTGTGGAGGGTTGCCAAGGAGGTGACGTGGAATTGGAACTTACATTGGGGTTTGGGCACAGTTGGATGCTGACGTGA 735 53.61 MRMSCNGCRVLRKGCSESCSIRPCLQWIKSPQSQANATFFLAKFYGRAGLVNLINAGPDHLRPAIFKSLLFEACGRIVNPIFGTAGLLWSGSWQLCQDAVEAVLKGAPILPVSSETAASHMGPPLKGCDIRHVSKQQDSASGSAVRKIKTRRRFKRSGTAKLKPKEEPGVVVVPEFTFDDQTQIVSEPQCLKFELDNWKGRESPEKDCGSDDTECLSVESVEGCQGGDVELELTLGFGHSWMLT* 245
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27514042 27514866 + Chy2G046320.1 Chy02g02365 221813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02365 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 237 - -
Chy02g02365 244 Pfam Lateral organ boundaries (LOB) domain 4 102 IPR004883 -
Chy02g02365 244 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Chy02g02365 244 PANTHER LOB DOMAIN-CONTAINING PROTEIN 40 1 237 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g00852 Chy-Chr2:5430973 Chy02g02365 Chy-Chr2:27514042 4.82E-50 dispersed
Chy02g02365 Chy-Chr2:27514042 Chy07g00181 Chy-Chr7:1489053 2.84E-37 dispersed
Chy06g01370 Chy-Chr6:13820404 Chy02g02365 Chy-Chr2:27514042 1.68E-65 transposed
Chy10g01149 Chy-Chr10:16407999 Chy02g02365 Chy-Chr2:27514042 1.24E-65 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17591 PF03195 LOB 1.30E-21 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02365 - - csv:101219232 479.174