Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02379 ATGACCTGGAGAAGAGTGTTGAAGTCCGTGCAGGCACTTTTGGCCCACGGTTCACTCTTCTGTTTCACGCTCTTGCTCGTTCTCAAGCTCGATCATTTCGTCTCCCACAGTTGGTGGGTTGTATTTTTTCCACTTTGGGTGTTTCATGTGGTTGTTGCTCGAGGAAGGTTCTCATTACCTGCCCCATCTCTTCCTCATAATCGCCATTGGGCACCCTGCCATGCTGTTGTTGCGACACCTTTGCTTATAGCATTTGAATTACTTCTTTGTGTATACCTCGAGAGCTTATCTGTTTATGGTTTCGCTGCTGTGAACTTGAAGATTGTCTTTCTACCGTTGCTGGCATTTGAAATCATTATTTTAATCGATAATTTCAGAATGTGTAGGTCACTGATGCCTGGTGATGATGAAAGCATGAGCGATGAAGCAATATGGGAGACACTGCCTCACTTTTGGGTTGCCATTTCAATGGTCTTCTTTGTTGCTGCTACAGTATTTACTCTACTGAAGCTTTCTGGGAACGTTGGTGCCCTTGGCTGGTGGGACTTGTTTATAAATTTTGGCATTGCTGAGTGCTTTGCATTTCTTGTATGTACAAAGTGGTCTAATCCAGCAATCCATAGAAATATTCAAACAAGAGAACGTTGTTCATCATCATCAGTAGTTAGATATCTAGATTGGAACAGTGGTCTTATAGTTTATCCAGAGCAGGATCAGCATCAGGACAGAATTTGTGGCCTTCAAGACATTGGAGGACATATTATGAAAATTCCCATAATTATTTTTCAAATTCTACTATGCATGTATTTAGAGGGAACGCCTGCAGCTGCTAAACGTATGCCACTTCCCATCCTTTTCTCGCCTCTTTTTATGTTGCAAGGTGCTGCTGTTATTTATGCTGCATCTAGATTGTTAGAGAAAGCAGTACTTCTCTTAAGAGGGGGATCTGGCACAGCATTGTATTTCAGTTTTTCAATTAGGGCTCATGCCTGTTTGGAGTTCTTTCATCATGGTTCAAGGCTATTGGGGTGGTGGTCAATTGATGAAAGCAGTCGAGAGGAGCAGGCACGATTGTACCACGAGGGTGCCTCTGGGTACAATACTTTTAGCGGATATCCTCCCGAGGTTGTGAAGAAGATGCCCAAGAAAGATCTTGCAGAGGAGGTGTGGCGCCTTCAAGCTGCTCTTGGAGAGCAGACAGAAATCACCAAATACAGTCAGCAGGAATATGAAAGACTTCAAAATGAAAAGGTGTTATGTCGGGTTTGTTTTGAGGGAGAAATTAGCGTGGTTCTTCTTCCGTGTAGGCATCGCGTACTATGCAGATACTTGTTTCTTGTTGATCCAGATTGGTTCAGGCTGGAATTCGATTGTTACTGGGGTTGTCAGTTTAGGTCCCCTTCATTTTCTGTGAAATCAGAAGTTAATGTGAAGTTGGATCCAGAATCTCTTCAAAAATGGGTTGTGGCCTTTTGCATTATTAGGTTTGATCTTGAACAGGGTCAACTCATTGAGGAGTGCTATCCTCCAGACTGTCTTACTCAAGATGAGGAACTTGAAGTTGCGTTTAGTTCATTTCCCGATTCAATTTCGCAGCACCAGAACCGTTCAAGCATTCATGATTGTATCTTCTTTTTCCGGCTTCGAAGGAAGGGAATTTCTCAACCAAGAAATATATCTTCTGAGATAACTGAAGTGGATGAGTTATCACAGAATACCAATGACTTTAAACTTCCAAGATCAAAGAACAGCCTTGGTACCAAGCCCAAGTACATGTATGGTTTTGTTTTTAATAGGCAGAGACACGATGAGAGGCTAAGAAGAGGTGGAGAGCAGAAGTCTGTGGTAATTCTGTCTCATAGTCCTTATTCTACTGTCTTTAAACCTCTGTTGCAAATCATGGGTCCATTATATTTTGACATCGGGAGGAGGGCTCTCGAGCATATTGCTGCTTATGTTTCAATGTGGCCTGCTCCAGTGCCCGGTAAACAAATGGAGCTTCCTATTGGAAATGCCATGCTTAAAGCACACTTGCCACCTGTTCATAGTCTGGCAATGGATGGTGAGACATTTTCCGAAGAGTCTACATCCTCTATGGCTCCTTTTCTTCCCAATAATCAGTCAGTTCCTCAGGGTCTTTTCCATGATTCTGATCTCTTTGGTACATTCCGGGGTCTTCTTTTGCAGCTCTGGCTGTTGTGGGAGTTGCAGCTTATTGGTGAACCCATCCTTATCATTGCACCAACGCCTCCCCAGTGTTGTGAAGCTGTTGCTGGTCTTGTTAGCTTGGTTGCTCCTCTTCTTTGTAGTGTTGATTTCAGACCTTATTTCACCATTCATGACCCTGAGTTTTCACGTTTAAACGCACTTCAAGATGGAGCTACTTTCCCACCAATGGTTTTAGGGGTGACGAATCTTTTCTTCCTTAAAGCTCTTCGTAATATTCCTCATATTGTCTCAGTTGGAAACCCTGCTGTTAATCGGCTTGCCCAGACATCCAGGTCCTCTTCTGGTAGTGTTTCTGGCGCACCTGAAGGGTTTGGATTTCGACAACTGTCCCTGAAAAAATTCTCCCCGTCAAACTTGCTCAATGCTGTCAAGTTGAGGAGAGATGGTCCGCTATGCCTCATGACGGAACATAAGGAAGCCATCTGGAGCACATACCCTGCAGCAATGAAGCCAGACACATCGATCTTGAATCGGCTTATTGATGCTGGCTTATCACCAAGGGTTGAGGAATCTATGTCTGTTGTCAACAATGAGATACTGCGTCGGCATTTCCTGGAACTTACTACCAACTTTTTGGCTCCTTTTGGGCCGTACTTCCGAACCACCACCCCTTCAGAAGGATGTTCTCCATTTGATGAGCCTTCTCGTCCCCAATTTAGTGCCGATGAATTTCTTGCCAATCTATCAACGAGAGGTCCAGGAAAATTTTTGGCTAAGCGAATGAGATCTAACTGGCTGGATTTGTACAGGCGGTTTCTCAAAGGACCAAACTTCATGCCTTGGTTTCAAAGGAGGTGTGATGTTGCAGAACAAGAACAGCATAGACTATGGAGGCAAGCAAGAATGAATTCTGATATACCACGGCTTATGTCTAAAATGCCTGAATTGGAAGTTGTTGATTTATTTAATGCGATTGAAAGACATCTTCTAAGAGAAATGGAGGAATCCAGGAGAGCTTATGTAGACTCTGTGGCAACTTGTCAGAAACTGAAAGGGGATCTGCTGACTGTTTTCAATGTGCTTCCTAAAGACATGCAACAACTCTTGCTTCTTAATCCACGAAGGGCATCTCTTCTCCGTGGAAGTTTTGAACCAACGAAACTTCCAGGGCGTCCGCTTGTACAAGTTGGTGTTGTATCACCAAGATAG 3378 43.64 MTWRRVLKSVQALLAHGSLFCFTLLLVLKLDHFVSHSWWVVFFPLWVFHVVVARGRFSLPAPSLPHNRHWAPCHAVVATPLLIAFELLLCVYLESLSVYGFAAVNLKIVFLPLLAFEIIILIDNFRMCRSLMPGDDESMSDEAIWETLPHFWVAISMVFFVAATVFTLLKLSGNVGALGWWDLFINFGIAECFAFLVCTKWSNPAIHRNIQTRERCSSSSVVRYLDWNSGLIVYPEQDQHQDRICGLQDIGGHIMKIPIIIFQILLCMYLEGTPAAAKRMPLPILFSPLFMLQGAAVIYAASRLLEKAVLLLRGGSGTALYFSFSIRAHACLEFFHHGSRLLGWWSIDESSREEQARLYHEGASGYNTFSGYPPEVVKKMPKKDLAEEVWRLQAALGEQTEITKYSQQEYERLQNEKVLCRVCFEGEISVVLLPCRHRVLCRYLFLVDPDWFRLEFDCYWGCQFRSPSFSVKSEVNVKLDPESLQKWVVAFCIIRFDLEQGQLIEECYPPDCLTQDEELEVAFSSFPDSISQHQNRSSIHDCIFFFRLRRKGISQPRNISSEITEVDELSQNTNDFKLPRSKNSLGTKPKYMYGFVFNRQRHDERLRRGGEQKSVVILSHSPYSTVFKPLLQIMGPLYFDIGRRALEHIAAYVSMWPAPVPGKQMELPIGNAMLKAHLPPVHSLAMDGETFSEESTSSMAPFLPNNQSVPQGLFHDSDLFGTFRGLLLQLWLLWELQLIGEPILIIAPTPPQCCEAVAGLVSLVAPLLCSVDFRPYFTIHDPEFSRLNALQDGATFPPMVLGVTNLFFLKALRNIPHIVSVGNPAVNRLAQTSRSSSGSVSGAPEGFGFRQLSLKKFSPSNLLNAVKLRRDGPLCLMTEHKEAIWSTYPAAMKPDTSILNRLIDAGLSPRVEESMSVVNNEILRRHFLELTTNFLAPFGPYFRTTTPSEGCSPFDEPSRPQFSADEFLANLSTRGPGKFLAKRMRSNWLDLYRRFLKGPNFMPWFQRRCDVAEQEQHRLWRQARMNSDIPRLMSKMPELEVVDLFNAIERHLLREMEESRRAYVDSVATCQKLKGDLLTVFNVLPKDMQQLLLLNPRRASLLRGSFEPTKLPGRPLVQVGVVSPR* 1126
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27604048 27618768 - Chy2G046460.1 Chy02g02379 221827
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02379 1125 Pfam Transmembrane Fragile-X-F protein 28 291 IPR019396 -
Chy02g02379 1125 Pfam Stabilization of polarity axis 722 823 - -
Chy02g02379 1125 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 396 443 IPR013083 -
Chy02g02379 1125 PANTHER TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN 1 443 - -
Chy02g02379 1125 PANTHER TRANSCRIPTION FACTOR C2H2 FAMILY-RELATED 1 443 - -
Chy02g02379 1125 ProSiteProfiles Tripartite DENN domain profile. 489 1006 IPR037516 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02379 Chy-Chr2:27604048 Chy06g01799 Chy-Chr6:21639769 5.06E-06 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02379 - - csv:101216067 1292.72