Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02388 ATGCTCGCCGTGGCTCCCGCGTCGTCAACCCCAAAGTCCGTCAGGTCGGATTCTTCACTCTCGACCCTCCCAATCCCCCCGGCCGTTCCCTCTCCGGTCCCGCCGATTGCACCCCTTCTCAACAGTCCCTCTCTCCTCCCTCCAATTCCTTGTCTCCGTCATGATTCCCCCTCCCGTCATCTCTCCGATAACCTCGCTTCTCGCTCTGCCGTTTTTCCTCTTCCACCTCCCGCCAATTGGAGGGATTCCGCCGATCATATTCATGTTGGCAGCTATAACCCCTCCGAAATGCTTCTTGCTACTTCTCCTTCTGGTAGAATTGGGGATGAAGAGTTGGATATGTCAGAGGATTCTTCCACCTCCGTTCCGTATCGCCGGAGTGGTTCTGGGAAGATTGCCTCGAGCTTTCCTGGCGTTGGAATCTACATGGCGGCTAAGGCGTCGGAGACTTCACAGGCGATGGTTCCTAACACGGTGGAAGCTAATAAGTCGGTTGGGGTTGCAGAAAAGAATGGGGGGGCTTCCACAGAGGTACAGAATCGACAGCCACCATCAAATTCAAAACCCCAAAAGGCAAAAACGACGAAGGCTGAAAGACGTGCTCTACAGGAAGCACAACGAGCTGCAAAAGGTGAAGCGAAGAAGTCAGGTAACGCTCCTGGTAAAGCTGTGAAGCAGTCATCGACTATGAGAGATAGCACTGCTGCACCTTCGGTGGCATCTACTGACAAAAGAGGAGGTGATCGCACACATGATAAAGAAAGGAAGAAAGATGCTCCACCTCCACGAATGCAGTTTGATGATAAAAGCAGGGTAGAAAAGGCTAAAAAGCGAGCAGTTTTCAACCAAACTGAAGCTAGAAATAGGGTTGAATTATTTCGCCATTTGCCACAATATGAGCAAGGAACTCAGCTTCCTGATCTCGTGTCAAAGTTTTTCCAACTTGACCCCATTCATCCTGCCATTTACAAGGTTGGTTTACAATATATGGCCGGAGATATATGTGGAGGCAATGCTCGTTGTATTGCTATGCTTCATGCATTTCAACAGGCCATCAAAGACTACTCAACTCCGCCACAGAAGTCTCTGGGTAGAGATTTAACCACAAAAATTGGTGGCTATGTATCATTCTTCAACGAGTGCAGGCCACTGTCTGTTAGCATGGGAAATGCAATTAGGTTTTTGAAAAATCTCATTGCCAAATTACCGTTGAATCTTCCGGAATCTGAAGTAAAAGCTACACTTTGCTCAGATATTGATCGTTTCATTAATGAAAAGATTATAATTGCAGACGAGGTCATAGTTAGACATGCTGCTACCAAAATCAGGGATGGGGATGTTCTTCTCACATATGGATCGTCATGTGCTGTAGAGATGCTCCTATTATATGCTCACGAGCTTGGAAGAGAATTTTGTGTTGTGGTGGTGGATTCCCGTCCAAAACTAGAAGGGCAAGCATTGCTTCGTAGGCTCATAGGGAGGGGCCTAAGTTGTACATACACTCATATAAATGCTATTTCTTACATGATGCACAAAGTAACACGAGTTTTTCTGGGGGCTGCTGCAGTATTATCTAATGGAACTGTATATTCAAGAGTGGGAACTGCAGCGGTTGCCATGGTTGCTAACACATTCCATGTTCCAGTGTTAATCTGCTGCGAAGCCTATAAATTCCACGAAAGGGTTCAGCTTGATTCAATATGTTTCAATGAATTAGGCGATCCAGATGCTATCTCAAAGGTTCCAGGAAGGAAGGATATTAATCATCTAGAAAATTTGGCTGCTAAAGAACAACTGCAACTTCTAAATTTAATGTACGACGCCACACCTTCAGATTACATCTCAATGATTGTCACAGATTATGGCATGCATCTTTTGAGAAGGGATTCTTTGTCCGAGGATGCTAGTGATTGCGCAGTTGCAGAAAAGTATCTTGCAAATGCTAACCAAAATGACATCTAG 1962 45.87 MLAVAPASSTPKSVRSDSSLSTLPIPPAVPSPVPPIAPLLNSPSLLPPIPCLRHDSPSRHLSDNLASRSAVFPLPPPANWRDSADHIHVGSYNPSEMLLATSPSGRIGDEELDMSEDSSTSVPYRRSGSGKIASSFPGVGIYMAAKASETSQAMVPNTVEANKSVGVAEKNGGASTEVQNRQPPSNSKPQKAKTTKAERRALQEAQRAAKGEAKKSGNAPGKAVKQSSTMRDSTAAPSVASTDKRGGDRTHDKERKKDAPPPRMQFDDKSRVEKAKKRAVFNQTEARNRVELFRHLPQYEQGTQLPDLVSKFFQLDPIHPAIYKVGLQYMAGDICGGNARCIAMLHAFQQAIKDYSTPPQKSLGRDLTTKIGGYVSFFNECRPLSVSMGNAIRFLKNLIAKLPLNLPESEVKATLCSDIDRFINEKIIIADEVIVRHAATKIRDGDVLLTYGSSCAVEMLLLYAHELGREFCVVVVDSRPKLEGQALLRRLIGRGLSCTYTHINAISYMMHKVTRVFLGAAAVLSNGTVYSRVGTAAVAMVANTFHVPVLICCEAYKFHERVQLDSICFNELGDPDAISKVPGRKDINHLENLAAKEQLQLLNLMYDATPSDYISMIVTDYGMHLLRRDSLSEDASDCAVAEKYLANANQNDI* 654
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27682027 27687847 + Chy2G046550.1 Chy02g02388 221836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02388 653 PANTHER TRANSLATION INITIATION FACTOR EIF-2B 56 623 - -
Chy02g02388 653 Gene3D - 429 630 IPR042529 -
Chy02g02388 653 MobiDBLite consensus disorder prediction 25 39 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 9 24 - -
Chy02g02388 653 PANTHER NAGB/RPIA/COA TRANSFERASE-LIKE SUPERFAMILY PROTEIN 56 623 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 244 276 - -
Chy02g02388 653 Pfam Initiation factor 2 subunit family 335 623 IPR000649 GO:0044237
Chy02g02388 653 MobiDBLite consensus disorder prediction 99 130 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 171 276 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 192 211 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 173 191 - -
Chy02g02388 653 SUPERFAMILY NagB/RpiA/CoA transferase-like 289 624 IPR037171 -
Chy02g02388 653 MobiDBLite consensus disorder prediction 221 240 - -
Chy02g02388 653 MobiDBLite consensus disorder prediction 1 39 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02387 Chy-Chr2:27674924 Chy02g02388 Chy-Chr2:27682027 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02388 K03680 - csv:101214144 1102.04