Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02402 ATGGAAGTTAATACCTATAATCATTCATTACACAAAATTCTCTTTCAATGGGAATGTTACTCGCCTCGACAGCAAAAAATTGCACTCTTAGCACTTCTGATCTTTACAGCTTTCTATTCAACTGGGGCTTACGATCCGTTGGATCCAAATGGGAACATAACAATCAAATGGGATGTAGTCTCTTGGACGCCAGACGGATATGTTGCTGTGGTGACAATGAACAACTTTCAGATGTACCGACATATCAATTCACCAGGATGGACTCTAGGCTGGTCATGGGCCAAGAAAGAAGTAATATGGTCAATGGTGGGAGCTCAGACAACGGAACAAGGAGATTGTTCCAAGTTCAAAGGAAATGTCCCTCACTGTTGCAAGAAAACCCCAATAGTTGTTGATTTGCTCCCTGGTGTTCCTTACAATCAACAATTCTCCAATTGCTGCAAAGGTGGAGTGTTGGCATCTTGGGGACAGGATCCAACAAGTTCCGTTTCCGCCTTTCAGGTGAGTGTTGGGCTAGCAGGCACATCAAACAAAACTGTAAAGTTGCCAAAAAACTTCACACTGCTCGGTCCAGGACCAGGGTACACATGTGGACCTGCAAAGGTTGTGCCTTCCACTGTCTTCCTTACTCCTGATCGTAGGCGGAAAACTCAAGCACTGAGTAAGCTTAATCTACTAATCCTCAAGTTGTTCTGGATAAATCTCTTGAAGTTAATTTATGCTGCATCTGATACAGTGACATGGAATGTAACCTGCACTTACTCACAATTTCTGGCCTCTAAGAACCCAACTTGCTGCGTATCACTCTCCACTTTCTACAATGATACAATCACTTCTTGCCCAACGTGTGCATGTGGCTGTCAGAACAAACATAATTGTATAAAGAGTGACTCAAAGCTATTGCACAAGGAAGGAATAAACACTCCCAAAAAGGATAATACACCTTTACTACAATGCACCCATCACATGTGTCCAATTAGAGTACACTGGCACGTAAAGATTAATTACAAGGATTACTGGCGTGTGAAGGTTGCTGTAACAAACTTCAACTATAGAATGAACTACACACTGTGGACACTGGCAGTGCAACATCCAAATCTAAACAATGTAACTCAAGTCTTCAGTTTTGACTACAAGCCCCTTGTTCCCTATGAATCCATCAGTGAGTTCTCTAAAATCCTTATGTTTTCAATGCAAATGTATGATGACACTGGCATGTTCTATGGCATGAAATTCTACAATGATCTATTAATGGAAGCAGGGCCATTTGGAAACGTACAATCTGAAGTACTCATGAAGAAGGACAAGGATACCTTTACCTTCAAGCAGGGTTGGGCCTTTCCTAGAAAAGTATACTTCAATGGCGACGAATGTCAGATGCCACCACCAGAATCGTACCCATTTCTTCCAAACTCTTCGCCTGTAGGATATGGTCCAGTTACCAAATTTACCACCTCCTTGATTTTGATACTCTGGTTCGTGTGGTGA 1488 42.14 MEVNTYNHSLHKILFQWECYSPRQQKIALLALLIFTAFYSTGAYDPLDPNGNITIKWDVVSWTPDGYVAVVTMNNFQMYRHINSPGWTLGWSWAKKEVIWSMVGAQTTEQGDCSKFKGNVPHCCKKTPIVVDLLPGVPYNQQFSNCCKGGVLASWGQDPTSSVSAFQVSVGLAGTSNKTVKLPKNFTLLGPGPGYTCGPAKVVPSTVFLTPDRRRKTQALSKLNLLILKLFWINLLKLIYAASDTVTWNVTCTYSQFLASKNPTCCVSLSTFYNDTITSCPTCACGCQNKHNCIKSDSKLLHKEGINTPKKDNTPLLQCTHHMCPIRVHWHVKINYKDYWRVKVAVTNFNYRMNYTLWTLAVQHPNLNNVTQVFSFDYKPLVPYESISEFSKILMFSMQMYDDTGMFYGMKFYNDLLMEAGPFGNVQSEVLMKKDKDTFTFKQGWAFPRKVYFNGDECQMPPPESYPFLPNSSPVGYGPVTKFTTSLILILWFVW* 496
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 27769415 27771760 - Chy2G046690.1 Chy02g02402 221850
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02402 495 PIRSF COBRA 238 495 IPR006918 GO:0010215|GO:0031225
Chy02g02402 495 PIRSF COBRA 18 228 IPR006918 GO:0010215|GO:0031225
Chy02g02402 495 Pfam COBRA-like protein 67 255 IPR006918 GO:0010215|GO:0031225
Chy02g02402 495 PANTHER PROTEIN COBRA 30 491 IPR006918 GO:0010215|GO:0031225
Chy02g02402 495 PANTHER COBRA-LIKE PROTEIN 4 30 491 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02402 Chy-Chr2:27769415 Chy07g00750 Chy-Chr7:8105336 0 dispersed
Chy02g02401 Chy-Chr2:27765988 Chy02g02402 Chy-Chr2:27769415 0 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02402 - - cmo:103494059 944.88