Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02437 ATGTTGGGAAATAATTCAAAAGATCAAAAGGGGTGTGAAGCAAAAGAAGAAGGAGTATTAGTTAGAAGTAGTAGTAATAATAATATTGATAGAAAATGCAGTTTCCCAAAGGCTCCAACAAGTAGTTCAAGACAATGGTCAGGATTCAGAAATCCAAGAATTGTTAGAGTTTCTCGTTCATTTGGAGGCAAAGATAGGCATAGCAAAGTTTGTACAATTAGAGGTTTGAGAGATAGAAGGATTAGACTTTCAGTTCCAACAGCAATTCAACTCTATGATCTTCAAGACAAGCTCAAACTTGGTCAACCAAGTAAAGTCATCGATTGGCTTCTCGACGTCACCAAACTCGATATCGACAACCTCCCCCCGCTCCAAATCCCCCCTGGTTTCTCTCCGTTCCACCAACAAATGCTCTTCCCTCAATACGTCGATCCTCATCATCATTATTACACTTCTTCCTCTTCTTCTTCTTCTTCCTCTTCTTCCTCTTCTCGATTTTGTAATTCCCTACCTCCTCCGTTTATGCTCGATGTGAAGAGTACTGATGCGTATCAAACGACAATGACAGTAGAAAAAACAAAGCTTTGGGATATGGATTTAGCAGTATTACAAGAAAAAGCAGGATCAGCGACGACTGCAGCAACAACGACGAAAGGGAAGTGGATTGATGGAAGTAATAATGATAGTAATAGTACTCAACAAGTAGAAGATTACAATGAGCAAATTTCATCACAAAAGCTCTTATCAATGGCTATTTGTTCTTCAAATTTACCCAACATGATGAACAATAATAACTCCACTCCTTACAATAATTACAACTCTTCTCATGATCATCATCATCGACAACAACCTTCTTGCTTATCACTTTCACAATTTGGGAACAATAATAATAGTAATGGAGTTTTTCCATCACAATTGGTTGAGGCTGCAGCTCAAGCAAGCACTTCATCATCTTCAAGTTCTTCACTATTTTTCACTCCTTATGCTTCATATATTACCAATCCATTTGAAAGTCATATCCATTTCTTGAGCTCAAATTCTCCTGCTTTGTCCAACCCCTTCATGTCTTCATCTCTCCATCCTTTTGCCACCTCACAAAACTTGAAACCCTTTCCACCTCCAAGTTTCAATCTCAAGCAGCTTTTTCATGCAGCTGACACCAATAATGCTGGTGGCAGCGCCGGTGCTGGCTCTTCCGCGAAAGACGGGGCGGCCGGGAACTCGTAG 1227 40.1 MLGNNSKDQKGCEAKEEGVLVRSSSNNNIDRKCSFPKAPTSSSRQWSGFRNPRIVRVSRSFGGKDRHSKVCTIRGLRDRRIRLSVPTAIQLYDLQDKLKLGQPSKVIDWLLDVTKLDIDNLPPLQIPPGFSPFHQQMLFPQYVDPHHHYYTSSSSSSSSSSSSSRFCNSLPPPFMLDVKSTDAYQTTMTVEKTKLWDMDLAVLQEKAGSATTAATTTKGKWIDGSNNDSNSTQQVEDYNEQISSQKLLSMAICSSNLPNMMNNNNSTPYNNYNSSHDHHHRQQPSCLSLSQFGNNNNSNGVFPSQLVEAAAQASTSSSSSSSLFFTPYASYITNPFESHIHFLSSNSPALSNPFMSSSLHPFATSQNLKPFPPPSFNLKQLFHAADTNNAGGSAGAGSSAKDGAAGNS* 409
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28028803 28030029 - Chy2G047040.1 Chy02g02437 221885
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02437 408 Pfam TCP family transcription factor 63 225 IPR017887 -
Chy02g02437 408 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 4 408 IPR005333 GO:0003700
Chy02g02437 408 MobiDBLite consensus disorder prediction 387 408 - -
Chy02g02437 408 PANTHER TRANSCRIPTION FACTOR TCP5 4 408 - -
Chy02g02437 408 MobiDBLite consensus disorder prediction 1 25 - -
Chy02g02437 408 ProSiteProfiles TCP domain profile. 63 121 IPR017887 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02437 Chy12g01493 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02437 Chy-Chr2:28028803 Chy07g00740 Chy-Chr7:7726894 1.56E-40 dispersed
Chy12g01493 Chy-Chr12:18794826 Chy02g02437 Chy-Chr2:28028803 5.80E-38 wgd
Chy12g01453 Chy-Chr12:18507587 Chy02g02437 Chy-Chr2:28028803 2.30E-12 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17600 PF03634 TCP 8.40E-23 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02437 - - csv:101218680 692.96