Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02475 ATGGCGCTGTTCAGACGGTTCTTTTACAGGAAGCCGCCGGATCGGCTTCTTGAGATCTCCGAGAGAGTCTATGTGTTTGATTGTTGCTTCTCCACGGAAGTGTTGGAAGAAGAAGAATATAAGGTCTACTTGGATGGCATTGTAGCACAGCTACAGAGTCACTTTCCTGATGCGTCATTCATGGTTTTCAACTTCAGAGAAGGTGGTAGGCGGAGTCAAATTTCTGATGTACTGACTCAGTATGACATGACAGTTATGGACTATCCTCGGCAATATGAGGGGTGTCCTTTATTGCCGTTGGAGATGATTCACCACTTCCTTCGATCAAGTGAAAGCTGGTTGTCACTGGAAGGTCAACAGAATGTGCTCTTGATGCATTGTGAAAGAGGAGGATGGCCTGTTCTTGCATTCATGCTAGCCGGTCTTCTCTTGTACAGGAAACAATACAGTGGGGAGCAGAAGACTCTTGAAATGGTCTACAAGCAAGCTCCTAAGGAACTTCTCCATCTTTTGTCTCCTTTAAATCCTCAGCCTTCCCAGCTGAGATATCTTCAATACATTTCCAGGAGAAATTTAGGTTCCGATTGGCCTCCATCAGATACACCTCTAATTTTGGATTGTTTAATACTAAGAGTTCTACCACTTTTTGATGGGGGAAAGGGATGTAGGCCTGTTGTGCGTATTTACGGTCAAGACCCCTCAGCACCGGCCAATAGAACTTCAAAGCTTTTATTTTCGACACCAATCAAAAGAAAACATATCCGCAACTACCTACAGGCAGAGTGTATGCTGGTGAAAATTGATATTCATTGCCATGTTCAAGGGGACGTAGTTCTTGAATGCATCCATATGGACGAAGATCTAGTACACGAGGAGATGATGTTTCGAATCATGTTTCACACAGCATTTGTTAGATCAAACATTATGATGCTGAACCGTGATGAAGTTGATGTTTTATGGGATGCGAGGGACCAGTATCCCAAGGACTTCAGAGTTGAGGCGCTCTTTTTGGATGCTGATGCTGTTGTCTCCAATCTCACCGCATCCTTTGATGATGAAGATGGAAATGAAACTGGAGCTGCTTCTCCTGAAGAATTTTTTGAGGTTGAAGAGATCTTCAGTAATGTAATGGATGGGCAGGAAGCAAAGGGATCCAATGATCCTCACGTAGTCAATCATGTAAATCGTAAAGAAGAATGGAAGGAGGACTTCGATCCTCCTGCATTCCAAGACTGTGCATCTGACGATGGAAATCTTAAGCATGATAAAAAGTCTGATTTTGATGCAGTGAAGGACATCACAGTGGATGATGTGAAGTACAAACTGGATGAAAATATATATTCTGAACTTAATGCAGTTAAGGACATTGCCGTGGATGATGGAGAAATGAATTCGAATTCCTTCTTGGTAGCTACTAATGTCCCGACTCATGTGAAAGTCCAGGGGTTGGTGGATGATGCATATGAGAAATTTGAAGATATGGAAGAAAAGGATGATGGAAGAGATACTTCACCCGAGAAATTGGAAAACAAGGTTCTGCAGAAGAAGTTGAGTGCTGATGGTTCTAGACAAAAATCAGAAAAATTGCAAACACCAATTCCCAAGAAACAGCCTGTTTCAAGTGGAAAACCGACCAATGATATGGGTTTAGCCAAACAGAAAGTCAAACAACAAGAGACTCAAGGTTTCTCTGCAAAACAAGCAAAGCCAAATGCAGTTTCTAGATGGATCCCTCCTAACAAAGGCTCTTATATGAATTCTATGCATGTTTCCTATCCACCCTCAAGATATAACAGTGCCCCAGCTGCTTTGGCAAGTATTGCATCGTCGAAGGATGTAAGTGCAAATTCCAAAACGAAGGCCACTGCCACCCTTGATTCTCTGGTTTCTTCAGATGTTTTTACTGAACGAAAAAACTATAAAGTGGATACTGTGAGGCCTTCTCACTCCGCACCTGGGAACCTCATGCATGGTCCATCATCTCCGGTTGAGTCAATTGTGACTGGTTCTATACCTTCCTCTGTGGGCATGCTATCTACCTTAAGGAATATTGCCAGTACTTCTCTTCTTGCCTCGTCACATAAAGAGATATCACTATCACCACCACCTCCCCCACCTCCCCCACCTTCTATGAAACATGAAGCACTTATTCCACCACCCCCACCACCCCCACCGCTCCCACCTATTATTTCAGGGCATG 2200 43.41 MALFRRFFYRKPPDRLLEISERVYVFDCCFSTEVLEEEEYKVYLDGIVAQLQSHFPDASFMVFNFREGGRRSQISDVLTQYDMTVMDYPRQYEGCPLLPLEMIHHFLRSSESWLSLEGQQNVLLMHCERGGWPVLAFMLAGLLLYRKQYSGEQKTLEMVYKQAPKELLHLLSPLNPQPSQLRYLQYISRRNLGSDWPPSDTPLILDCLILRVLPLFDGGKGCRPVVRIYGQDPSAPANRTSKLLFSTPIKRKHIRNYLQAECMLVKIDIHCHVQGDVVLECIHMDEDLVHEEMMFRIMFHTAFVRSNIMMLNRDEVDVLWDARDQYPKDFRVEALFLDADAVVSNLTASFDDEDGNETGAASPEEFFEVEEIFSNVMDGQEAKGSNDPHVVNHVNRKEEWKEDFDPPAFQDCASDDGNLKHDKKSDFDAVKDITVDDVKYKLDENIYSELNAVKDIAVDDGEMNSNSFLVATNVPTHVKVQGLVDDAYEKFEDMEEKDDGRDTSPEKLENKVLQKKLSADGSRQKSEKLQTPIPKKQPVSSGKPTNDMGLAKQKVKQQETQGFSAKQAKPNAVSRWIPPNKGSYMNSMHVSYPPSRYNSAPAALASIASSKDVSANSKTKATATLDSLVSSDVFTERKNYKVDTVRPSHSAPGNLMHGPSSPVESIVTGSIPSSVGMLSTLRNIASTSLLASSHKEISLSPPPPPPPPPSMKHEALIPPPPPPPPLPPIISGHX 734
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28320742 28324393 + Chy2G047420.1 Chy02g02475 221923
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02475 734 MobiDBLite consensus disorder prediction 644 663 - -
Chy02g02475 734 MobiDBLite consensus disorder prediction 490 523 - -
Chy02g02475 734 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 13 188 IPR029021 -
Chy02g02475 734 Gene3D Protein tyrosine phosphatase superfamily 14 205 IPR029021 -
Chy02g02475 734 SMART PTEN_C2_2 198 338 IPR014020 -
Chy02g02475 734 MobiDBLite consensus disorder prediction 490 563 - -
Chy02g02475 734 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Chy02g02475 734 Gene3D - 206 336 - -
Chy02g02475 734 MobiDBLite consensus disorder prediction 698 734 - -
Chy02g02475 734 CDD PTP_PTEN-like 16 190 - -
Chy02g02475 734 PANTHER FORMIN-J 1 727 - -
Chy02g02475 734 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 336 IPR035892 -
Chy02g02475 734 MobiDBLite consensus disorder prediction 689 734 - -
Chy02g02475 734 MobiDBLite consensus disorder prediction 524 563 - -
Chy02g02475 734 Pfam C2 domain of PTEN tumour-suppressor protein 200 336 IPR014020 -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02475 Chy12g01523 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02475 Chy-Chr2:28320742 Chy07g00331 Chy-Chr7:2686037 0 dispersed
Chy12g01523 Chy-Chr12:18995713 Chy02g02475 Chy-Chr2:28320742 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02475 - - csv:101215105 1322.76