Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02504 ATGGAAGGAGGTGATGAACTTCACCACCATCATCACCATCATCACCAGAATCACCACCACCAACACCACCACCAACACCAACACCGTCCTACTTTCCCATTTCAATTACTTGAAAAGAAAGACGACGATGCTGCCTCTTGTTCCACTTCTCCTTACCCTTCTCTTGCTATCTCTGCCGACACGACTACTACGACTACGACTACGACCACGACCAGTTCAGTTGTTGCAGCAGAGACTTCTAAGAAGCCCCCACCAAAGAGAACTTCTACCAAAGACCGTCACACGAAAGTCGATGGACGGGGTCGTCGTATACGAATGCCGGCCTTATGTGCGGCTAGGGTATTCCAACTTACTAGAGAATTAGGCCATAAGTCTGACGGTGAAACCATCGAGTGGCTTCTTCAACAAGCGGAACCCGCTGTGATTGCTGCTACTGGAACCGGTACTATCCCGGCTAATTTCACATCGCTTAACATTTCGTTACGTAGCTCTGGTTCTAGTATGTCGGTTCCTTCACAGCTCCGATCTTCCTCTTATTACAACCCGAATTTCTCCCTTCATCAACAACGTCGAACCCTTTTCCCGGGTTTTGGCCTCTCATCGGAAACCTCCTCCACCGCCGCTCTTCTCAATTTCCAGTCCACCAACATCGGAAACTCTCTGCTGCAAGCGAAACCCGAAATAAGAGACACTCCCTCTTCGTTAGACCTCTCAGATGCGGCGGAGGAAATCAGTATAGGACGGAAGAGAAGACCGTCGACGGAGCAGGAGTTGTCGTCGTCGTCGTCGCAACATCAAATGGGGAGTTATCTGTTGCAATCGAGTACAGGGACGATTCCAGCGAGTCACGGAGGAGCTCAGGTTCCGGCAAATTTTTGGATGCTTACGAATACAAATAACCAAGTGATGGGGGGTGATCCGATATGGACGTTTCCGTCGGTTAATAACAGCGGCTTGTACAGAGGAACGATGTCGAGTGGGTTACATTTCATGAATTTTCCGGCACCGGTGGCGTTGGTGCCAGGTCAGCAATTCGGGTCCGGCACCGGCGGAGGAAGTAATAATAACAACAACAACAATAATAATAGTTCGAGTGAAGGACACTTAAATATACTCGCCGGACTAAATCCATATCGATCAGTTTCTAGTAGCGGCGTAATGGAACCACAAGGAAGTGGGTCGCAGTCACATCATGGCGGCGGTGGTGGTGGAGATGATCGGCATGATACAACGAGTCACCAGTCGTAA 1248 49.6 MEGGDELHHHHHHHHQNHHHQHHHQHQHRPTFPFQLLEKKDDDAASCSTSPYPSLAISADTTTTTTTTTTTSSVVAAETSKKPPPKRTSTKDRHTKVDGRGRRIRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFTSLNISLRSSGSSMSVPSQLRSSSYYNPNFSLHQQRRTLFPGFGLSSETSSTAALLNFQSTNIGNSLLQAKPEIRDTPSSLDLSDAAEEISIGRKRRPSTEQELSSSSSQHQMGSYLLQSSTGTIPASHGGAQVPANFWMLTNTNNQVMGGDPIWTFPSVNNSGLYRGTMSSGLHFMNFPAPVALVPGQQFGSGTGGGSNNNNNNNNNSSSEGHLNILAGLNPYRSVSSSGVMEPQGSGSQSHHGGGGGGDDRHDTTSHQS* 416
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28485684 28486931 + Chy2G047710.1 Chy02g02504 221952
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02504 415 MobiDBLite consensus disorder prediction 1 30 - -
Chy02g02504 415 MobiDBLite consensus disorder prediction 346 397 - -
Chy02g02504 415 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 20 414 IPR005333 GO:0003700
Chy02g02504 415 MobiDBLite consensus disorder prediction 47 78 - -
Chy02g02504 415 MobiDBLite consensus disorder prediction 228 267 - -
Chy02g02504 415 Pfam TCP family transcription factor 88 259 IPR017887 -
Chy02g02504 415 MobiDBLite consensus disorder prediction 84 99 - -
Chy02g02504 415 MobiDBLite consensus disorder prediction 401 415 - -
Chy02g02504 415 MobiDBLite consensus disorder prediction 344 415 - -
Chy02g02504 415 ProSiteProfiles TCP domain profile. 90 144 IPR017887 -
Chy02g02504 415 MobiDBLite consensus disorder prediction 44 99 - -
Chy02g02504 415 PANTHER TRANSCRIPTION FACTOR TCP14-LIKE 20 414 - -
Chy02g02504 415 MobiDBLite consensus disorder prediction 10 29 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02504 Chy12g01554 CCT
Chy02g02504 Chy12g01554 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02504 Chy-Chr2:28485684 Chy10g00749 Chy-Chr10:13690054 2.00E-46 dispersed
Chy11g01807 Chy-Chr11:24424506 Chy02g02504 Chy-Chr2:28485684 2.22E-24 dispersed
Chy06g01548 Chy-Chr6:17303644 Chy02g02504 Chy-Chr2:28485684 1.97E-37 transposed
Chy10g00992 Chy-Chr10:15398882 Chy02g02504 Chy-Chr2:28485684 2.51E-85 wgd
Chy12g01554 Chy-Chr12:19166908 Chy02g02504 Chy-Chr2:28485684 5.22E-09 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17609 PF03634 TCP 1.10E-38 No_clan Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02504 - - csv:101221049 657.136