Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02515 ATGGAGGCTCAACAAGCTTTGGCAACCATTGATGATGACAGAGTTCAATCAACTGGAGAAGGAGATGATAAACAAGCTTCTCCTAATCCTAAACAACATATTCATCTCAAGGTCCCTTCTATGGGTGACTTGGAAAAGCCTTCAATGGAAACTCTTTCAGTCCCATCAGCTTCTAATTCAACTTGGAAGGAAGAGGATGATGAGCAACGTCATGAAGAAAGAATGAAAAGGACGAAAGTTGAAATGAGGGAAGTAAAGGAAGAAAACGAGAGGTTAAAGAAGTATTTGGATGAAATAATGAAAGATTATGAGACATTGAAAAGGAAATTCCATGAGATTAAGAATAATCATGATGATCAAATTAGAGAAGAAGGCAAAAAATCAACACAAACAAGTGGAAGTACAATAAATAATAATAATAATGATAATGATGAAGATCATCAACTTGAAGCTGAAGTTGATGACATGGTTTCACTCAGATTAGGATCAAGATTCTCAACCCATCATCAAAACAAGAACACTTCTTCTTCTTCCTTCTCTCTAACTAATAAGATCTTAGATCTCAAACAAGATTATGTTATTCAAACCCCATCAATTATTGATCACAGTATTCATAGTCCAACCCATAGCGAACCTAAAGATCAGGAAGAAGCCGGACAGACGACTTGGCCGCCGAGTAAAATGCCGAAGCCTGGCGGTTTGCCCTCACCTGCTACCGGAGAAGATGAAGTTTCTCAACAGAATCCTCCTAAGAAAGCTAGGGTTTGTGTTAGAGCTCGATGTGATACTCCAACGATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAGATAGCAAAAGGAAATCCATGCCCTAGAGCTTATTATCGATGCACCGGTGCACCCACTTGTCCTGTTAGGAAGCAGGTACAAAGGAGTGTTGATGATATTTCCATACTAATAACAACCTATGAAGGAACTCACAACCATCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCTGCTGCCGCTTCGATGCTCCTCTCGGGCCCTTCCTCCTCCACCTCCTCCCAACCCGGCCTAAACCATTCATTTACCGCTCCTGCGACCGCTGCGAATCTTCATGGAATGAACATGTATCTCTCTAACAACACCAATTCAAAGCAATTCTATTTGCCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACTTTAGATCTCACTTCAAATCCTCCTTCAACTTCCTCCTCTTCACCTTTCCATAAAATCCCTTTAATTAATAACAATAATTATCCCCCAAAATATCCCTTCACAAATCTTGATTTTGCCTCTTCACAGCCCAATTTCATGTCTTGGAATAATCATAACAATAATGCTTATAGTAATATTACCAAAAACAATGCAATAATAGGAATGGGATCGGATTTTGCTAAACAACTTCCTCTTCATACTAACATCTACCAAGCTTATCTTCAACAACTTTCTAAACCTTCAACGACTCCGCAGCCACCAGCTCTACCAGATACGATAGCAGCGGCAACTAAGGCAATTACATCGGACCCAAGTTTCCAATCGGCATTGGCGGCTGCGTTGAGCTCGATTATCGGAGGCGGGGAGACGGGTCCAAGTGTTTCTAGCTTAGTTGTTGGAGGAGGAGGAGGAGGACAAGAAAGTATGGGGTTTGAGGCAGCTAAGTCATTAACATGCTCTACTTCTAAGAGTACTCCTTCTTCATCTCCTGGGGATAGTAGAGATAATGGGAAGTGA 1770 41.24 MEAQQALATIDDDRVQSTGEGDDKQASPNPKQHIHLKVPSMGDLEKPSMETLSVPSASNSTWKEEDDEQRHEERMKRTKVEMREVKEENERLKKYLDEIMKDYETLKRKFHEIKNNHDDQIREEGKKSTQTSGSTINNNNNDNDEDHQLEAEVDDMVSLRLGSRFSTHHQNKNTSSSSFSLTNKILDLKQDYVIQTPSIIDHSIHSPTHSEPKDQEEAGQTTWPPSKMPKPGGLPSPATGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPTCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSSQPGLNHSFTAPATAANLHGMNMYLSNNTNSKQFYLPNSSMLSSSLNHPTITLDLTSNPPSTSSSSPFHKIPLINNNNYPPKYPFTNLDFASSQPNFMSWNNHNNNAYSNITKNNAIIGMGSDFAKQLPLHTNIYQAYLQQLSKPSTTPQPPALPDTIAAATKAITSDPSFQSALAAALSSIIGGGETGPSVSSLVVGGGGGGQESMGFEAAKSLTCSTSKSTPSSSPGDSRDNGK* 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28539679 28543453 - Chy2G047820.1 Chy02g02515 221963
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02515 589 Pfam WRKY DNA -binding domain 267 325 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g02515 589 MobiDBLite consensus disorder prediction 114 146 - -
Chy02g02515 589 Gene3D WRKY domain 251 328 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g02515 589 MobiDBLite consensus disorder prediction 541 589 - -
Chy02g02515 589 MobiDBLite consensus disorder prediction 61 88 - -
Chy02g02515 589 MobiDBLite consensus disorder prediction 1 88 - -
Chy02g02515 589 PANTHER WRKY TRANSCRIPTION FACTOR 61-RELATED 62 551 - -
Chy02g02515 589 Coils Coil 68 123 - -
Chy02g02515 589 SUPERFAMILY WRKY DNA-binding domain 259 327 IPR036576 GO:0003700|GO:0006355|GO:0043565
Chy02g02515 589 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 62 551 IPR044810 GO:0003700
Chy02g02515 589 MobiDBLite consensus disorder prediction 564 589 - -
Chy02g02515 589 MobiDBLite consensus disorder prediction 202 254 - -
Chy02g02515 589 MobiDBLite consensus disorder prediction 15 30 - -
Chy02g02515 589 ProSiteProfiles WRKY domain profile. 261 327 IPR003657 GO:0003700|GO:0006355|GO:0043565
Chy02g02515 589 MobiDBLite consensus disorder prediction 127 142 - -
Chy02g02515 589 SMART WRKY_cls 266 326 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02515 Chy12g01329 CCT
Chy02g02515 Chy12g01329 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02515 Chy-Chr2:28539679 Chy06g01098 Chy-Chr6:9215281 9.04E-46 dispersed
Chy12g01329 Chy-Chr12:17635968 Chy02g02515 Chy-Chr2:28539679 6.48E-104 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17611 PF03106 WRKY 1.30E-23 CL0274 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02515 - - csv:101213180 1014.99