Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g02515 | ATGGAGGCTCAACAAGCTTTGGCAACCATTGATGATGACAGAGTTCAATCAACTGGAGAAGGAGATGATAAACAAGCTTCTCCTAATCCTAAACAACATATTCATCTCAAGGTCCCTTCTATGGGTGACTTGGAAAAGCCTTCAATGGAAACTCTTTCAGTCCCATCAGCTTCTAATTCAACTTGGAAGGAAGAGGATGATGAGCAACGTCATGAAGAAAGAATGAAAAGGACGAAAGTTGAAATGAGGGAAGTAAAGGAAGAAAACGAGAGGTTAAAGAAGTATTTGGATGAAATAATGAAAGATTATGAGACATTGAAAAGGAAATTCCATGAGATTAAGAATAATCATGATGATCAAATTAGAGAAGAAGGCAAAAAATCAACACAAACAAGTGGAAGTACAATAAATAATAATAATAATGATAATGATGAAGATCATCAACTTGAAGCTGAAGTTGATGACATGGTTTCACTCAGATTAGGATCAAGATTCTCAACCCATCATCAAAACAAGAACACTTCTTCTTCTTCCTTCTCTCTAACTAATAAGATCTTAGATCTCAAACAAGATTATGTTATTCAAACCCCATCAATTATTGATCACAGTATTCATAGTCCAACCCATAGCGAACCTAAAGATCAGGAAGAAGCCGGACAGACGACTTGGCCGCCGAGTAAAATGCCGAAGCCTGGCGGTTTGCCCTCACCTGCTACCGGAGAAGATGAAGTTTCTCAACAGAATCCTCCTAAGAAAGCTAGGGTTTGTGTTAGAGCTCGATGTGATACTCCAACGATGAACGATGGATGTCAATGGAGAAAATATGGACAAAAGATAGCAAAAGGAAATCCATGCCCTAGAGCTTATTATCGATGCACCGGTGCACCCACTTGTCCTGTTAGGAAGCAGGTACAAAGGAGTGTTGATGATATTTCCATACTAATAACAACCTATGAAGGAACTCACAACCATCCTCTACCTGTTTCAGCCATGGCCATGGCTTCCACCACCTCTGCTGCCGCTTCGATGCTCCTCTCGGGCCCTTCCTCCTCCACCTCCTCCCAACCCGGCCTAAACCATTCATTTACCGCTCCTGCGACCGCTGCGAATCTTCATGGAATGAACATGTATCTCTCTAACAACACCAATTCAAAGCAATTCTATTTGCCAAACTCTTCAATGCTATCTTCTTCTCTAAACCATCCCACAATCACTTTAGATCTCACTTCAAATCCTCCTTCAACTTCCTCCTCTTCACCTTTCCATAAAATCCCTTTAATTAATAACAATAATTATCCCCCAAAATATCCCTTCACAAATCTTGATTTTGCCTCTTCACAGCCCAATTTCATGTCTTGGAATAATCATAACAATAATGCTTATAGTAATATTACCAAAAACAATGCAATAATAGGAATGGGATCGGATTTTGCTAAACAACTTCCTCTTCATACTAACATCTACCAAGCTTATCTTCAACAACTTTCTAAACCTTCAACGACTCCGCAGCCACCAGCTCTACCAGATACGATAGCAGCGGCAACTAAGGCAATTACATCGGACCCAAGTTTCCAATCGGCATTGGCGGCTGCGTTGAGCTCGATTATCGGAGGCGGGGAGACGGGTCCAAGTGTTTCTAGCTTAGTTGTTGGAGGAGGAGGAGGAGGACAAGAAAGTATGGGGTTTGAGGCAGCTAAGTCATTAACATGCTCTACTTCTAAGAGTACTCCTTCTTCATCTCCTGGGGATAGTAGAGATAATGGGAAGTGA | 1770 | 41.24 | MEAQQALATIDDDRVQSTGEGDDKQASPNPKQHIHLKVPSMGDLEKPSMETLSVPSASNSTWKEEDDEQRHEERMKRTKVEMREVKEENERLKKYLDEIMKDYETLKRKFHEIKNNHDDQIREEGKKSTQTSGSTINNNNNDNDEDHQLEAEVDDMVSLRLGSRFSTHHQNKNTSSSSFSLTNKILDLKQDYVIQTPSIIDHSIHSPTHSEPKDQEEAGQTTWPPSKMPKPGGLPSPATGEDEVSQQNPPKKARVCVRARCDTPTMNDGCQWRKYGQKIAKGNPCPRAYYRCTGAPTCPVRKQVQRSVDDISILITTYEGTHNHPLPVSAMAMASTTSAAASMLLSGPSSSTSSQPGLNHSFTAPATAANLHGMNMYLSNNTNSKQFYLPNSSMLSSSLNHPTITLDLTSNPPSTSSSSPFHKIPLINNNNYPPKYPFTNLDFASSQPNFMSWNNHNNNAYSNITKNNAIIGMGSDFAKQLPLHTNIYQAYLQQLSKPSTTPQPPALPDTIAAATKAITSDPSFQSALAAALSSIIGGGETGPSVSSLVVGGGGGGQESMGFEAAKSLTCSTSKSTPSSSPGDSRDNGK* | 590 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 28539679 | 28543453 | - | Chy2G047820.1 | Chy02g02515 | 221963 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g02515 | 589 | Pfam | WRKY DNA -binding domain | 267 | 325 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 114 | 146 | - | - | |
Chy02g02515 | 589 | Gene3D | WRKY domain | 251 | 328 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 541 | 589 | - | - | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 61 | 88 | - | - | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 1 | 88 | - | - | |
Chy02g02515 | 589 | PANTHER | WRKY TRANSCRIPTION FACTOR 61-RELATED | 62 | 551 | - | - | |
Chy02g02515 | 589 | Coils | Coil | 68 | 123 | - | - | |
Chy02g02515 | 589 | SUPERFAMILY | WRKY DNA-binding domain | 259 | 327 | IPR036576 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g02515 | 589 | PANTHER | WRKY TRANSCRIPTION FACTOR 36-RELATED | 62 | 551 | IPR044810 | GO:0003700 | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 564 | 589 | - | - | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 202 | 254 | - | - | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 15 | 30 | - | - | |
Chy02g02515 | 589 | ProSiteProfiles | WRKY domain profile. | 261 | 327 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 | |
Chy02g02515 | 589 | MobiDBLite | consensus disorder prediction | 127 | 142 | - | - | |
Chy02g02515 | 589 | SMART | WRKY_cls | 266 | 326 | IPR003657 | GO:0003700|GO:0006355|GO:0043565 |
Event-related genes

Select | Gene_1 | Gene_2 | Event_name |
---|---|---|---|
Chy02g02515 | Chy12g01329 | CCT | |
Chy02g02515 | Chy12g01329 | ECH |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02515 | Chy-Chr2:28539679 | Chy06g01098 | Chy-Chr6:9215281 | 9.04E-46 | dispersed | |
Chy12g01329 | Chy-Chr12:17635968 | Chy02g02515 | Chy-Chr2:28539679 | 6.48E-104 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17611 | PF03106 | WRKY | 1.30E-23 | CL0274 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g02515 | - | - | csv:101213180 | 1014.99 |