Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02519 ATGGGTCTTTTCATTTGGGTCTCATCCTTCATTTTAGTAGCTACCCTTTTAAGCAAATGCTCTTTTTCTCTCACTGAAGATGGTTTAACATTGTTGGAAATCAAAAGTACTTTAAATGACACCAAGAACGTCCTCAGTAATTGGAGCCCTACAGATGAAACTCCCTGTAAATGGACTGGTATCTCTTGCCATCCTGAGGACTCTCGTGTCAGCTCAGTTAATCTTCCGTTCATGCAACTAGGAGGGATTATATCTCCCAGCATCGGTAAACTTAGTAGATTGCAGAGACTGGCTCTCCACCAGAACGGCTTACATGGATATATCCCCAATGAACTTGCCAATTGTTCTGAACTCAGAGCCCTGTACTTGAGGGCTAATTATCTTCAAGGAGGCATTCCATCCAATATTGGAAACCTGTCATACCTTACCATACTTGATTTATCATGCAATTCCTTTAAGGGTAGTATACCATCATCAATTGGTCGTCTCACACACTTGCGGAATCTGAATTTATCTACCAACTTCTTCTTTGGAGAAATCCCAGATATTGGAGTTCTAAGCACCTTTGGTAACAACTCATTCTTTGGTAATCAAGGTCTTTGTGGTCGACAAGTGAACAAGCCGTGCCGGACCTCACTGGGTTTTCCTGTTGTTTTACCACATGCTGAAAGTGATGAAGCAGCAGTTCCTCCTAAGCGATCCTCTCATTACACCAAAGGACTGTTGATTGGTGCAATATCAACAGCAGGGTTTGTGTTGGTCATACTTATTGTATTCATGTGGACTCGTTTGGTGTCAAAGAAAGAAAGAACTGCAAAGAGTTACATGGAAGTTAAGAAGCAAAAAAATCGTGATACAAGTGCAAAGCTTATTACATTCCATGGGGATCTACTTTATCCAACATGTGAGATCATAGAAAAGCTGGAGGCCCTGAATGAAACAAATGTTGTTGGCTCTGGAGGTCTTGGAACCGTGTATCGAATGGTCATGAATGACTCTGGAGCTTTTGCTGTGAAGAAAATTGATAGGACTCAGGACGGTCCAGATCAAGTAGTTGAAAGAGAACTGGAGATACTGGGTAGCATTAAACACATAAATTTAGTGAAATTGCGTGGCTATTGCAGGCTTCCTTCTTCAAAGCTTCTTATATTTGACTATCTGTCGGCTGGTAGCTTGGACAATTTCTTGCATGAACGTGGACCAGAAAAGTCATTGGATTGGAGTGCTCGGTTAAACATAGCGCTAGGCTCCGCTCGAGGACTGGCGTACTTGCACCATGATTGCTGTCCAAAGATTGTGCACTGCAACATAAAATCCAGCAACATTCTTCTTGACGAGAACTTAGAGCCGCATGTATCTGACTTTGGTCTTGCAAAGCTTTCGGTTGATGGGGATTCCCATGTCACAACTGTTGTTGCCGGTACATTTGGTTATTTGGCTCCAGAATACTTAGAAAGTGGGATAGGAACCGAGAAGTCTGATGTTTATAGCTTTGGAGTTCTCTTGCTGGAGCTTGTAACAGGGAAGAGACCAAGTGATCCATTTTTCTCGAAGAGGGGTGTAAATATTGTTGGTTGGTTGAACACACTGCGGGGAGAAGACCAATTGGAGAACATAGTCGATAATAGGTGCCAGAACGCAGATGTTGAAACGGTAGAAGCAATTCTCGAAATAGCAGCGAGGTGCACCAATGGCAATCCGACTGTGCGGCCTACAATGAACCAAGTATTGCAGCAGCTAGAGCAAGAGGTGATGTCGCCGTATCCGAGCGATTACTCTGAGTCTCACTCGGATTACTCGTGA 1803 43.26 MGLFIWVSSFILVATLLSKCSFSLTEDGLTLLEIKSTLNDTKNVLSNWSPTDETPCKWTGISCHPEDSRVSSVNLPFMQLGGIISPSIGKLSRLQRLALHQNGLHGYIPNELANCSELRALYLRANYLQGGIPSNIGNLSYLTILDLSCNSFKGSIPSSIGRLTHLRNLNLSTNFFFGEIPDIGVLSTFGNNSFFGNQGLCGRQVNKPCRTSLGFPVVLPHAESDEAAVPPKRSSHYTKGLLIGAISTAGFVLVILIVFMWTRLVSKKERTAKSYMEVKKQKNRDTSAKLITFHGDLLYPTCEIIEKLEALNETNVVGSGGLGTVYRMVMNDSGAFAVKKIDRTQDGPDQVVERELEILGSIKHINLVKLRGYCRLPSSKLLIFDYLSAGSLDNFLHERGPEKSLDWSARLNIALGSARGLAYLHHDCCPKIVHCNIKSSNILLDENLEPHVSDFGLAKLSVDGDSHVTTVVAGTFGYLAPEYLESGIGTEKSDVYSFGVLLLELVTGKRPSDPFFSKRGVNIVGWLNTLRGEDQLENIVDNRCQNADVETVEAILEIAARCTNGNPTVRPTMNQVLQQLEQEVMSPYPSDYSESHSDYS* 601
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28567627 28571103 - Chy2G047860.1 Chy02g02519 221967
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02519 600 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 35 592 - -
Chy02g02519 600 PANTHER REPEAT FAMILY PROTEIN, PUTATIVE, EXPRESSED-RELATED 35 592 - -
Chy02g02519 600 ProSiteProfiles Protein kinase domain profile. 311 585 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02519 600 Pfam Leucine rich repeat N-terminal domain 26 63 IPR013210 -
Chy02g02519 600 SUPERFAMILY L domain-like 25 186 - -
Chy02g02519 600 SUPERFAMILY Protein kinase-like (PK-like) 290 581 IPR011009 -
Chy02g02519 600 Pfam Protein kinase domain 313 579 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02519 600 Gene3D Transferase(Phosphotransferase) domain 1 387 591 - -
Chy02g02519 600 Gene3D Ribonuclease Inhibitor 25 211 IPR032675 -
Chy02g02519 600 Gene3D Phosphorylase Kinase; domain 1 270 386 - -
Chy02g02519 600 Pfam Leucine rich repeat 117 174 IPR001611 GO:0005515
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02519 Chy12g01321 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02519 Chy-Chr2:28567627 Chy03g01723 Chy-Chr3:18729498 1.71E-103 dispersed
Chy07g00573 Chy-Chr7:5018974 Chy02g02519 Chy-Chr2:28567627 0 transposed
Chy07g01117 Chy-Chr7:16085302 Chy02g02519 Chy-Chr2:28567627 0 transposed
Chy07g01542 Chy-Chr7:19666562 Chy02g02519 Chy-Chr2:28567627 4.64E-43 transposed
Chy11g01830 Chy-Chr11:24658353 Chy02g02519 Chy-Chr2:28567627 2.49E-39 transposed
Chy12g01321 Chy-Chr12:17575644 Chy02g02519 Chy-Chr2:28567627 1.73E-95 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71102 PF00069 Pkinase 2.00E-44 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02519 - - csv:101217728 1160.21