Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02522 ATGGAAGAAAAGGGAGAGAAGCCTGAGGTTTTGGAGGCTGTATTGAAGGAAACTGTGGACTTGGAAAATATACCCATCGAGGAGGTTTTTGATAATCTGAGATGTAGCAAAGAGGGTCTCACTACAGCAGCTGCTGAGGAACGACTTGTAATTTTTGGTCACAACAAGCTTGAGGAGAAGAAGGAAAGTAAAGTACTGAAGTTTTTGGGGTTTATGTGGAACCCCTTATCATGGGTAATGGAGGCTGCTGCTATTATGGCCATTGCACTCGCAAATGGTGGAGGAAAGCCGCCTGACTGGCAGGATTTTGTTGGTATTATCGCCCTGTTGCTTATCAACTCAACGATTAGTTTCATTGAGGAAAATAATGCCGGAAACGCTGCAGCTGCGCTAATGGCCAGTTTAGCTCCCCAAGCCAAGATTCTTCGAGATGGAAGGTGGAGTGTACAAGATGCGTCGGTTTTAGTTCCTGGTGATATTATAAGTATCAAACTTGGGGATATTATTCCAGCTGATGCACGTCTTCTGGATGGGGATCCGTTGAAAATCGATCAGTCTGCACTTACAGGCGAGTCTCTTCCTGTTACTAAAGGTCCCGGCGATGGCATATACTCTGGTTCTACTTGTAAACAAGGAGAGATTGAAGCGGTGGTCATTGCCACTGGTGTTCATACTTTCTTTGGTAAGGCTGCCCACCTTGTTGACACCACTAACCAAGTGGGACACTTCCAAAAGGTCTTGACTGCAATTGGGAACTTCTGCATATGTTCCATTGCTTTGGGCATGATTACAGAAATTATTGTCATGTACCCTATCCAAGATCGTGACTATCGTCCTGGAATTGACAATCTTCTTGTGCTTTTGATCGGAGGAATTCCAATTGCCATGCCCACAGTTCTCTCTGTGACAATGGCTATCGGCTCTCATAGGTTATCTCAGCAGGGAGCTATCACAAAGAGGATGACTGCAATTGAAGAAATGGCAGGAATGGATGTGCTTTGCAGTGACAAGACGGGAACACTGACACTAAACAAGCTAACTGTCGACAAAAATCTTGTTGAGGTTTTTGCTAAAGGAGTGGATGTCGATACAGTGGTTCTTATGGCAGCCCGGGCATCAAGAACAGAGAATCAAGATGCTATTGATACTGCCATTGTTGGGATGCTTGCTGACCCAAAAGAGGCTCGTGCTGGTATTCAAGAAGTACACTTCCTTCCATTTAACCCTACTGATAAGCGGACTGCATTGACTTACATAGACCATGAAGGTAAAATGCATAGAGTCAGCAAAGGGGCACCTGAGCAGATTCTGAACCTTGCGCACAATAAGTCAGAGATCGAGCGCAAAGTTCATGCTGTGATAGACAAGTTTGCAGAACGAGGTTTACGCTCTCTAGCTGTGGCATACCAGGAAGTTCCAGATGGTCGAAAGGAGAGTGCTGGAGGTCCATGGCAGTTTGTTGGCCTCCTGCCACTGTTCGACCCACCAAGGCATGACAGTGCAGAGACAATAAGGAGGGCATTAAATCTTGGAGTGAATGTGAAGATGATTACTGGTGACCAGCTGGCCATTGGAAAGGAAACAGGACGTCGCTTGGGGATGGGAACCAACATGTATCCCTCATCTGCTTTGTTAGGACAGGACAAGGATGAGTCTATTGCTGCTTTACCTGTTGATGAACTGATAGAAAAAGCCGATGGCTTTGCTGGCGTTTTCCCTGAGCACAAATATGAGATTGTCAAGCGCCTGCAGGCAAGGAAACACATCTGTGGAATGACTGGCGATGGAGTAAATGATGCTCCTGCCCTTAAAAAAGCTGACATAGGGATAGCTGTCGCTGATGCTACTGATGCTGCTCGCAGTGCTTCAGACATAGTCCTTACAGAGCCTGGTTTGAGTGTTATCATTAGTGCTGTTTTGACCAGTCGTGCTATCTTTCAGAGGATGAAAAATTACACTATATATGCAGTTTCAATCACTATTCGTATAGTGCTTGGTTTCATGTTGCTGGCTCTCATATGGAAATTTGACTTCCCACCATTTATGGTGCTTATCATTGCCATTCTCAATGATGGTACAATAATGACGATATCAAAGGATAGAGTAAAACCGTCTCCTTTGCCTGATAGCTGGAAACTGGCTGAAATTTTCACAACTGGGATTATACTTGGCGGTTACTTGGCAATGATGACTGTTATCTTCTTTTGGGCGGCCTATAAGACAAACTTTTTTCCACAAATCTTTGGGGTAGCAACTCTCGAGAAAACTGCTCATGATGACATAAGGAAATTGGCCTCAGCAGTGTATCTTCAAGTAAGCACTATAAGTCAGGCTCTCATATTTGTTACTCGCTCTCGAAGTTGGTCTTACGTGGAACGTCCTGGGTTATTACTGGTTGCAGCTTTTCTGGTTGCACAGCTGATTGCTACTTTAATTGCGGTTTATGCAAACTGGGGCTTTGCTGCCATTGAAGGAATTGGATGGGGTTGGGCCGGTGTTATCTGGCTTTACAACATTATCTTTTACATCCCACTTGATCTCATTAAGTTCTTTATACGATATGCTTTGAGTGGGAGGGCTTGGGATCTTGTTATTGAACAGAGGATTGCCTTCACGAGACAAAAGGACTTTGGGAAGGAACAACGGGAGCTACAGTGGGCTCATGCGCAAAGAACATTACACGGATTACAAGCACCTGACGCCAAAATGTTCCACGACCGAACTCATTTCACCGAGCTCAATCAGATGGCTGAAGAAGCCAAAAGGAGAGCTGAAATTGCAAGGTTGAGGGAACTACACACCTTGAAAGGCCATGTTGAATCAGTGGTGAGGCTGAAAGGACTTGACATTGACACAATTCAGCAAGCTTACACGGTATGA 2880 44.97 MEEKGEKPEVLEAVLKETVDLENIPIEEVFDNLRCSKEGLTTAAAEERLVIFGHNKLEEKKESKVLKFLGFMWNPLSWVMEAAAIMAIALANGGGKPPDWQDFVGIIALLLINSTISFIEENNAGNAAAALMASLAPQAKILRDGRWSVQDASVLVPGDIISIKLGDIIPADARLLDGDPLKIDQSALTGESLPVTKGPGDGIYSGSTCKQGEIEAVVIATGVHTFFGKAAHLVDTTNQVGHFQKVLTAIGNFCICSIALGMITEIIVMYPIQDRDYRPGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLVEVFAKGVDVDTVVLMAARASRTENQDAIDTAIVGMLADPKEARAGIQEVHFLPFNPTDKRTALTYIDHEGKMHRVSKGAPEQILNLAHNKSEIERKVHAVIDKFAERGLRSLAVAYQEVPDGRKESAGGPWQFVGLLPLFDPPRHDSAETIRRALNLGVNVKMITGDQLAIGKETGRRLGMGTNMYPSSALLGQDKDESIAALPVDELIEKADGFAGVFPEHKYEIVKRLQARKHICGMTGDGVNDAPALKKADIGIAVADATDAARSASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFMLLALIWKFDFPPFMVLIIAILNDGTIMTISKDRVKPSPLPDSWKLAEIFTTGIILGGYLAMMTVIFFWAAYKTNFFPQIFGVATLEKTAHDDIRKLASAVYLQVSTISQALIFVTRSRSWSYVERPGLLLVAAFLVAQLIATLIAVYANWGFAAIEGIGWGWAGVIWLYNIIFYIPLDLIKFFIRYALSGRAWDLVIEQRIAFTRQKDFGKEQRELQWAHAQRTLHGLQAPDAKMFHDRTHFTELNQMAEEAKRRAEIARLRELHTLKGHVESVVRLKGLDIDTIQQAYTV* 960
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28585261 28591409 - Chy2G047890.1 Chy02g02522 221970
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02522 959 ProSitePatterns E1-E2 ATPases phosphorylation site. 336 342 IPR018303 -
Chy02g02522 959 SMART Cation_ATPase_N_a_2 20 92 IPR004014 -
Chy02g02522 959 TIGRFAM ATPase-IIIA_H: plasma-membrane proton-efflux P-type ATPase 39 815 IPR006534 GO:0008553|GO:0016021|GO:0120029
Chy02g02522 959 Gene3D - 99 824 - -
Chy02g02522 959 Coils Coil 910 930 - -
Chy02g02522 959 Gene3D - 908 959 - -
Chy02g02522 959 SFLD p-type atpase 316 644 IPR044492 -
Chy02g02522 959 Pfam Cation transporter/ATPase, N-terminus 23 86 IPR004014 -
Chy02g02522 959 SUPERFAMILY HAD-like 330 640 IPR036412 -
Chy02g02522 959 Gene3D - 346 493 IPR023299 GO:0000166
Chy02g02522 959 PRINTS H+-transporting ATPase (proton pump) signature 593 609 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 PRINTS H+-transporting ATPase (proton pump) signature 624 649 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 PRINTS H+-transporting ATPase (proton pump) signature 450 468 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 PRINTS H+-transporting ATPase (proton pump) signature 565 581 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 PRINTS H+-transporting ATPase (proton pump) signature 769 790 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 SFLD Haloacid Dehalogenase 316 644 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 334 348 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 593 612 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 616 628 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 510 520 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 488 499 - -
Chy02g02522 959 PRINTS P-type cation-transporting ATPase superfamily signature 184 198 - -
Chy02g02522 959 PANTHER CALCIUM-TRANSPORTING ATPASE 6 939 - -
Chy02g02522 959 PANTHER PLASMA MEMBRANE ATPASE 1 6 939 - -
Chy02g02522 959 SUPERFAMILY Calcium ATPase, transmembrane domain M 20 856 IPR023298 -
Chy02g02522 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 568 681 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 TIGRFAM ATPase_P-type: HAD ATPase, P-type, family IC 106 352 IPR001757 GO:0005215|GO:0005524|GO:0016021|GO:0016887
Chy02g02522 959 Pfam haloacid dehalogenase-like hydrolase 330 607 - -
Chy02g02522 959 Pfam E1-E2 ATPase 135 313 - -
Chy02g02522 959 SUPERFAMILY Calcium ATPase, transduction domain A 137 234 IPR008250 -
Chy02g02522 959 CDD P-type_ATPase_H 39 850 IPR006534 GO:0008553|GO:0016021|GO:0120029
Chy02g02522 959 Gene3D - 331 630 IPR023214 -
Chy02g02522 959 Gene3D - 137 221 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02522 Chy12g01318 CCT
Chy02g02522 Chy12g01318 ECH
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02522 Chy-Chr2:28585261 Chy09g00272 Chy-Chr9:2252574 0 dispersed
Chy12g01318 Chy-Chr12:17564665 Chy02g02522 Chy-Chr2:28585261 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02522 K01535 - csv:101217264 1812.73