Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02525 ATGGCGCGGAAGAAGAAGAATACTGATCCGCGTCAAGGAGTCGCTGGTGAGGGTCCAAGTGAAGCGACCGCTGCCGGAAAGAGTTCAGTATCTGATAAGCCGAGCAGTCAAAATCAAAGTAGGATCGACAGGGTGGTTGTCAAGGAATCGGATGAAGGTCTGTCGTATTCCGCAATTAAACTCGAATGTGAGAAGGCTCTTACCGCACTTCGGCGCGGAAACCACACTAAGGCACTCAGGCTTATGAAGGAGTTGAGTTCAAGAGATGAGAACTCTGTTCACTCGGCACTGATTCATCGCGTTCAGGGTACTCTTCTTGTAAAAGTTGCGTCGATTATTGATGACCCGAGTACAAAGCAGCGGCATTTGAAAAATGCGATTGAGTCGGCTCGGAAAGCTGTCCAGCTCTCACCAGACTCAATTGAATTTTCACATTTCTACGCAAATTTGCTTTATGAGGCCGCAAATGATGCAAAGGAGTACGAAGAGGTTGTGCAAGAGTGTGAGCGGGCCTTGGTAATTGAAAATCCTATCGATCCTGCCAAAGAAAGTTTGCAAGACGAACAGAATCAGAAAATACCTACTTCCGAAGGCCGAATTACACACGTTCAGACGGAATTGAGGCAGTTAATTCAAAAATCGAGTATATACTCTTTATCATCTTGGATGAAGAATTTAGGTAACGGGGAAGAGAAGTTCAGATTGATTCCCATTAGAAGAGTGACAGAGGACCCAATGGAGGTGGGGATGGTTCAGGCTAGAAGGGCAAACGAAATGAAGAAAGCAACCAAAACGCCTGAAGAGCGAAGGAAGCAAATTGAAGTCCGTGTTGCTGCTGCAAGGCTGATGCAACAACAGTCTGAGTCGCCTCCAATGCAGGATGAAGGAGGTAAAGCTGATCGGACCACCCCGGATTCATCTTCAGGGTCTGTTCGGACTCAGGATACATCTTCGGGGTCTGTTCGGACCCAGGATACACCTCCAGGGCCTGTTACAAGGGTTGTTGAGCGGCGGAAACATGGTGGTAGTGTGCGGAAACTTGGCTCTTCAGCTGAAAGAAAGAATTGGGTTTATTCTCTGTGGAGTTCTATGAGTTCAGAGTCAAAGAAAGATGTGCTTAAGATCAAGACTAGTGATCTTGAGACTCACTTTAGTTCTTTGAAGGATACCTCGGCAAATGAATTTATTTCAGAAGCCTTGTCTTTTTATGACGCCAATAAAACATGGAAATTTTGGGTTTGCTGCAAATGTGATAAGAAATTTGTCAATTCAGAATCCCATATGCACCACGTGGCTCAAGAGCACTTGGGCAACCTTTTGCCGAAAATGCAATCTATGTTGCCACACAATGTCGATAATGATTGGAGTGAAATGCTTCTCAATTGCTCTTGGAAACCATTGGATGTTTCAGCTGCAACCAAAATGTTCACAGATCAAACTAAATGCAAAGATTCTGAGTTCGTTGAAGATATGTGCCCACAACGTCATTCAGAATGTGATGAGTGTATCAAAGATGCATGGGATTTTTCTCCAGAGAAGCAGGATCATGAGAATAGTTTAAATGAATCCAAACTTTATGAAAAAATTAGCAACAGCGGATATCCAATACCTGATAGTTTTCCAGTATCTGATGACTCTGAGCGTGCAAAGCTTCTTGAAAAAATTCATGGGGTATTTGAGTTACTTATTAAACATAAATATCTTGCTGCAAGCCAGCTAAACAAGATTATTCAATTTACCATGGATGAGCTACAGGGTATTGTTTCTGGATCTCATCTTCTAAAGCAGGGTTTAGATCAAACACCACAATGCATTTGCTTTCTAGGTGCTTCCCAGCTTAGGAAAATCCTTAAGTTTTTGCAAGAATTATCTCAGTCTTGTGGTGTAGGTAGATACTCTGATAGAAGTACCGATCAAATTGAAGATTCAAAGAGTGACAAACAATCTGTTGATGTCGAAGAGAAAATTGTTTTTAATGGAGATGCATCACTTCTACTCCTTAATGAGTGTTTGTTATCTTCTAAAATCTCTCATGTCAGTGATCAGATGCCTGCTGCAAGTGAGGTTAATTCTGACGTTGATCCTTTCCTAGCATGGATATATGCAAGTCCCTCTAGTGGTGACCAATTAGCATCATGGGCAAAAACAAAAGAGGAAAAGAAACAAGGGCAAACAGAAAATTTTCAATCGCTTGAGAAGGAATTTTACCAACTGCAGAACCTTTGTGAGAGAAAATGTGAGCATTTGAACTATGAGGAAGCATTGCAGTCAGTGGAGGATCTCTGCCTTGAAGAGGGCAAGAAGAGAGAAGCTATGACTGAATTTATCTCCAAAAGTTATGAGTCAGTCCTGAGGAAGCGAAGAGAGGAGCTTATTGAGGCTGAAAATGATGCGATGTACATAGGCAGTAGGTTTGAGTTGGATGCTTTAACTAATGTTTTGAAAGAAGCTGAAGCTCTGAATGCTAATCAACTTGGATATGGGGAAAATTTTGCCAGTGTGCCTTCTCAGTTGTATGATTTGGAATCTGGTGAAGATGAAGGTTGGAGGGCTAAGGATTATTTGCATCAAGTTGATACTTGTATTGAAATTGCAATAAAGAGACAGAAGGAACAACTATCTATTGAGATTAGCAAAATTGATGGACGCATCATGCGAAATGTTACTGGAATGCAAGAGTTGGAACTTAAGCTGGAGCCTGTTTCGGCACACGATTATCAATCAATATTGTTGTCTCTTGTGAACTCATACTTGAGGGCGCATTTAGAAGATTTGGCTGAAATAGATGTCACGAAGAAGTCCGATGCTGCAAGAGAAGCATTTTTAGCTGAACTGGAACGAGATTCAAAAAAGGATAGCAAAGGTGGAAGTGATAATCCAAAACATGCACGTGAAAAGTCGAAGGAAAAGAAAAAGAGCAAGGAGTTTAGGAAAGCCAAGGACTCTAAGTTGGTCAGTGTTCGTGAGCAAAATGTGCCTTATGATGAGGTTGTCGATAGAGATACCTTTCAAGTTCCATCTGAAGGTGATGTTGCAGAGGTGGATATTGCTGTTAGTGAGAATTCTGATGCTTTAAGACTAGAAGAGGAAGAGATAAGACGTAAAATCGAGCTAGAAGCAGATGAAAGAAAGCTAGAAGAGACTTTGGAGTATCAAAGACGAATTGAGAAGGAGGCTAAACAAAAGCATTTGGCTGAACTACAAAAGAAATCTGCACAAACAAATCTAAAGAAGAAAGTTGATCCGGCAGTATCTGAAAATCCCATTGGACTCACCCCCAGTGTTGAGGGTGTTGATGAGCGTTTTAAGCCTTCCGTGGTGGATCAATTGGCAGAAAATGAATTGGTTCCTGACTCTTCTAGTACGGCAAGTGCTTCTTCAGGTGCATCCAATGTAGAAAATTCAGATACTAGCCTGCGATCGTCTGATAGGAGGAAGGGTAGGAGAGGTAGACGTAAGGGTGTAACCAAACCAGTTGATGGAAATCAATCTTCACATTCTGATAAGGATAATGTAGCCTTTGATAGCCAATTGATTGAGCAAGTTGGATATCATGACAGTCTCCCAGTAGATAGTGTTAATCCCCGTTCTGAAGATAATAGTGCGAAGACTTTAAGACAACAACATGCAGAGGATGATGAGAAACAATTTCAAGCTGACCTTAAGAAGGCTGTGCTCGAGAGCCTTGATGCATTTCAAGAAAAGCAGAACTTTCCAAGTTCCAGTACACCATCGACCAGTCGTGGTGAAGTAGATAGTACCGATCTTCCATCAAATGAACTCAATGCAGGCAATGTGCAGGGAGCAGATATTTGTGGTACAGGACTTAAGAATGAAATTGGTGAATACAATTGCTTTCTGAATGTCATTATTCAGTCCTTATGGCATTTACGACGGTTTCGAGTAGAGTTCCTGAGAAGATCTAAGATTGAGCATGTTCATGTTGGGGATCCCTGTGTTGTTTGTGCATTATATGATATCTTCACTGCCTTGAGCATGGCATCTGTAGATGCTAGAAGAGAAGCAGTGGCCCCCACTTCTTTGAGAATAGCTCTGAGTACTCTTTGTCCTGATAATAAATTTTTCCAAGAGGGCCAAATGAACGACGCCTCTGAAGTGCTGGCAGTCATATTTGATTGCCTACACCAGTCATTGACTACTAGTTTGAGCATTTCTGATACAGAATCAGTAGAAAGCAATTGCATGGGGTCGTGGGACTGTGCAAGTGACACTTGTTTGGTGCATTCCATCTTTGGCATGGACATTTTTGAACGAATGAATTGCTATAGTTGTGGCCTGGAATCTAGACATCTAAAGTACACTACCTTTTTTCACAATATAAATGCTAGTGCCCTTCGAACAATGAAGGTTATGTGTACAGAAAGCTCCTTCGATGAACTTCTGAATGTTGTTGAAATGAATCATCAGCTAGCTTGTGATTTGGATGTTGGTGGTTGCGGAAAGCTCAATTACATTCATCACTTTCTCGCTGCCCCACCACATGTGTTCACAACAGTCTTGGGCTGGCAGAACACTTGTGAGAGTGCTGATGACATAACAGCAACATTAGCTGCTCTGAATACTGAGATAGATATCAGTGTTCTTTATCGGGGTCTAGATCCAAAGAGTACACATAACTTGGTATCAGTGGTTTGCTATTATGGTCAACACTATCATTGTTTTGCCTACAGTCACGACAAGAAATGCTGGATAAAGTATGATGATAGAACTGTTAAGGTAATTGGTGGCTGGCTTGATGTCCTTACCATGTGCGAAAAAGGACATTTACAACCTCAGGTTCTTTTCTTTGAAGCTGTAAATTAG 4824 41.71 MARKKKNTDPRQGVAGEGPSEATAAGKSSVSDKPSSQNQSRIDRVVVKESDEGLSYSAIKLECEKALTALRRGNHTKALRLMKELSSRDENSVHSALIHRVQGTLLVKVASIIDDPSTKQRHLKNAIESARKAVQLSPDSIEFSHFYANLLYEAANDAKEYEEVVQECERALVIENPIDPAKESLQDEQNQKIPTSEGRITHVQTELRQLIQKSSIYSLSSWMKNLGNGEEKFRLIPIRRVTEDPMEVGMVQARRANEMKKATKTPEERRKQIEVRVAAARLMQQQSESPPMQDEGGKADRTTPDSSSGSVRTQDTSSGSVRTQDTPPGPVTRVVERRKHGGSVRKLGSSAERKNWVYSLWSSMSSESKKDVLKIKTSDLETHFSSLKDTSANEFISEALSFYDANKTWKFWVCCKCDKKFVNSESHMHHVAQEHLGNLLPKMQSMLPHNVDNDWSEMLLNCSWKPLDVSAATKMFTDQTKCKDSEFVEDMCPQRHSECDECIKDAWDFSPEKQDHENSLNESKLYEKISNSGYPIPDSFPVSDDSERAKLLEKIHGVFELLIKHKYLAASQLNKIIQFTMDELQGIVSGSHLLKQGLDQTPQCICFLGASQLRKILKFLQELSQSCGVGRYSDRSTDQIEDSKSDKQSVDVEEKIVFNGDASLLLLNECLLSSKISHVSDQMPAASEVNSDVDPFLAWIYASPSSGDQLASWAKTKEEKKQGQTENFQSLEKEFYQLQNLCERKCEHLNYEEALQSVEDLCLEEGKKREAMTEFISKSYESVLRKRREELIEAENDAMYIGSRFELDALTNVLKEAEALNANQLGYGENFASVPSQLYDLESGEDEGWRAKDYLHQVDTCIEIAIKRQKEQLSIEISKIDGRIMRNVTGMQELELKLEPVSAHDYQSILLSLVNSYLRAHLEDLAEIDVTKKSDAAREAFLAELERDSKKDSKGGSDNPKHAREKSKEKKKSKEFRKAKDSKLVSVREQNVPYDEVVDRDTFQVPSEGDVAEVDIAVSENSDALRLEEEEIRRKIELEADERKLEETLEYQRRIEKEAKQKHLAELQKKSAQTNLKKKVDPAVSENPIGLTPSVEGVDERFKPSVVDQLAENELVPDSSSTASASSGASNVENSDTSLRSSDRRKGRRGRRKGVTKPVDGNQSSHSDKDNVAFDSQLIEQVGYHDSLPVDSVNPRSEDNSAKTLRQQHAEDDEKQFQADLKKAVLESLDAFQEKQNFPSSSTPSTSRGEVDSTDLPSNELNAGNVQGADICGTGLKNEIGEYNCFLNVIIQSLWHLRRFRVEFLRRSKIEHVHVGDPCVVCALYDIFTALSMASVDARREAVAPTSLRIALSTLCPDNKFFQEGQMNDASEVLAVIFDCLHQSLTTSLSISDTESVESNCMGSWDCASDTCLVHSIFGMDIFERMNCYSCGLESRHLKYTTFFHNINASALRTMKVMCTESSFDELLNVVEMNHQLACDLDVGGCGKLNYIHHFLAAPPHVFTTVLGWQNTCESADDITATLAALNTEIDISVLYRGLDPKSTHNLVSVVCYYGQHYHCFAYSHDKKCWIKYDDRTVKVIGGWLDVLTMCEKGHLQPQVLFFEAVN* 1608
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28607973 28616016 + Chy2G047920.1 Chy02g02525 221973
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02525 1607 Pfam Ubiquitin carboxyl-terminal hydrolase 1275 1582 IPR001394 GO:0004843|GO:0016579
Chy02g02525 1607 ProSitePatterns Zinc finger C2H2 type domain signature. 414 435 IPR013087 -
Chy02g02525 1607 Coils Coil 151 171 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 24 43 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 332 347 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1233 1262 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1114 1137 - -
Chy02g02525 1607 Coils Coil 714 734 - -
Chy02g02525 1607 CDD Peptidase_C19 1366 1604 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 947 982 - -
Chy02g02525 1607 SUPERFAMILY Cysteine proteinases 1274 1604 IPR038765 -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1059 1076 - -
Chy02g02525 1607 Pfam Protein of unknown function (DUF629) 358 864 IPR006865 -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1059 1096 - -
Chy02g02525 1607 ProSiteProfiles Ubiquitin specific protease (USP) domain profile. 1274 1606 IPR028889 -
Chy02g02525 1607 PANTHER INACTIVE UBIQUITIN CARBOXYL-TERMINAL HYDROLASE 53-LIKE 45 1607 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1112 1170 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 283 348 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 302 327 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1202 1217 - -
Chy02g02525 1607 Gene3D Cysteine proteinases 1263 1607 - -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1184 1217 - -
Chy02g02525 1607 Gene3D Tetratricopeptide repeat domain 55 191 IPR011990 GO:0005515
Chy02g02525 1607 PANTHER UBIQUITIN SPECIFIC PROTEINASE 45 1607 - -
Chy02g02525 1607 Pfam Protein of unknown function (DUF627) 66 175 IPR006866 -
Chy02g02525 1607 MobiDBLite consensus disorder prediction 1 44 - -
Chy02g02525 1607 Coils Coil 1028 1048 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02525 - - csv:101212702 3058.47