Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02550 ATGGCTGCAGGAAACAACACCTCCTACGATTGGGCCGACCAGTGGGACTACAGCGACTCCCCCGACGTAGTCTCTGATAACAAGAAGAAGACCGGCGGTGGAAATACTTCGGCCAAGTATAAGCAGAAGGTCGGGGAAGGGCTTGGCAAGACCAAATCTGTGGCTTCTAATGGCGTCAAAAAGTTTGAAGAAGACAAGAGCTCTGCTGTAATGGCGATTTCCATTCCCACCCGGCAGCTATTCATCGACGGCGAGTGGAGGGAGCCAATTCTCAAGAAACGCATCCCCGTCATCAACCCCACTACTGAAGAAACAATCGGATCTATTCCTGCTGCTACTGCTGAAGATGTAGAGTTAGCTGTTGATGCTGCTAGAAAAGCGCTGGCGAGGAATAAAGGCAAAGATTGGCGCTCTGCTTCGGGGGCTGTTCGTGCCAAGTATTTGCGTGCTATTGCTGCCAAGATAACAGAGAGGAAATTGGAATTAGCAAAGCTTGAGGCAATAGACTGTGGAAAACCTCTGGAAGAAGCTGCATGGGACATGGACGATGTTGCTGGGTGCTTCGATTACTATGCAGATCTTGCTGAAGGATTGGATGCAAAGCAGAAAGCTCCTGTTGCTGTTCCCATGGATACATTCAAGAGCTATGTTCTAAAAGAACCCATTGGAGTTGTTGGGTTGATTACTCCCTGGAACTATCCTCTATTGATGTGTGCATGGAAAGTTGCACCTGCCTTGGCTGCTGGATGTGCTGCAATTTTGAAGCCATCAGAACTTGCATCTGTCACCTCTTTGGAACTGGCCGAAATATGTAAAGATGTTGGTCTTCCATCTGGAATTTTGAATGTTCTGACAGGATACGGCCCTGAAGCTGGTGCTCCTCTAGCAACTCATCCTCATGTTGACAAGGTTGCATTTACTGGGAGTGGTGCTACTGGAAGCAAGATTATGGCATCAGCTGCCCAACTTGTCAAGCCTGTTACCATGGAACTTGGTGGAAAAAGTCCGATTGTCGTTTTTGATGATGTTGATCTTGACAAGGCTGCCGAATGGGCAATATTTGGTTGCTTTTGGACAAATGGTCAGATTTGCAGTGCCACATCCCGTCTACTTGTACACGAAAACATTGCTGATGAATTCTTGGATAAGATCGTGCAATGGTGCAAGAACATTAAGATTTCAGATCCTTTAGAAGAAGGTTGCAGACTTGGCCCTGTTGTTAGTGCAGGACAGTATGAGAAAGTATTGAAGTTTGTCTCAACTGCTGAGCAAGAAGGTGCAAAGATTCTATATGGTGGAGTTCGCCCTAAGCACCTAAAGAAGGGATACTTCGTTGAACCAGCCATTATTACTAATGTTACAACTTCCATGCAAATATGGAAAGAAGAAGTTTTTGGACCTGTTCTATGTGTGAAGACTTTTAGTTCTGAAGATGAAGCTATTGAATTAGCAAATGATACAATATATGGGCTAGGTGCTGCTGTAATATCAAATGATTTAGAAAGGTGTGATCGTGTAGCCAAGGCTTTTCAGGCAGGAATTGTATGGATTAATTGCTCGCAACCATGCTTCACTCAAGCCCCATGGGGAGGCATCAAACGGAGTGGCTTTGGTCGAGAGCTAGGGGAATGGGGACTTGATACTTATCTGACTGTAAAGCAGGTTACTCAATACATATCCGATGAACCATGGGGATGGTACAAATCTCCTTCTAAACTGTAA 1722 45.47 MAAGNNTSYDWADQWDYSDSPDVVSDNKKKTGGGNTSAKYKQKVGEGLGKTKSVASNGVKKFEEDKSSAVMAISIPTRQLFIDGEWREPILKKRIPVINPTTEETIGSIPAATAEDVELAVDAARKALARNKGKDWRSASGAVRAKYLRAIAAKITERKLELAKLEAIDCGKPLEEAAWDMDDVAGCFDYYADLAEGLDAKQKAPVAVPMDTFKSYVLKEPIGVVGLITPWNYPLLMCAWKVAPALAAGCAAILKPSELASVTSLELAEICKDVGLPSGILNVLTGYGPEAGAPLATHPHVDKVAFTGSGATGSKIMASAAQLVKPVTMELGGKSPIVVFDDVDLDKAAEWAIFGCFWTNGQICSATSRLLVHENIADEFLDKIVQWCKNIKISDPLEEGCRLGPVVSAGQYEKVLKFVSTAEQEGAKILYGGVRPKHLKKGYFVEPAIITNVTTSMQIWKEEVFGPVLCVKTFSSEDEAIELANDTIYGLGAAVISNDLERCDRVAKAFQAGIVWINCSQPCFTQAPWGGIKRSGFGRELGEWGLDTYLTVKQVTQYISDEPWGWYKSPSKL* 574
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28760247 28769720 - Chy2G048170.1 Chy02g02550 221998
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02550 573 SUPERFAMILY ALDH-like 71 559 IPR016161 GO:0016491
Chy02g02550 573 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1, CHLOROPLASTIC 71 570 - -
Chy02g02550 573 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 94 553 IPR016162 GO:0016491
Chy02g02550 573 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 357 368 IPR016160 GO:0016491
Chy02g02550 573 MobiDBLite consensus disorder prediction 1 46 - -
Chy02g02550 573 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 71 570 - -
Chy02g02550 573 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 337 528 IPR016163 GO:0016620
Chy02g02550 573 CDD ALDH_F10_BADH 97 557 - -
Chy02g02550 573 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 329 336 IPR029510 GO:0016491
Chy02g02550 573 Pfam Aldehyde dehydrogenase family 90 555 IPR015590 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02550 Chy-Chr2:28760247 Chy02g02570 Chy-Chr2:28916466 7.37E-118 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02550 K00130 - csv:101213657 1004.59