Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02555 ATGTGGGTCTTTTTAGTTCATTGCAATCTTCGCCAATTCCATCGCATCGTCTTGTGTCTGTATGTCTTGTGGCCTCCTATGTTGTCGCAGAAAAGAAACCCAGATGATGGAGATGGTCCGGCGGATGGTGATAATCCCGATGATAAGCGTAGGAAGTTTTGTCTTACGAGTGTGGTTCGTGATGCCATAGCATTGCAATCAATGCAACAGCTATTGGAGCCCGTCATTCGTAAAGTGGTGAGGGAGGAGGTTGAATTGGCACTAGGAAAGTACATTACCAATGTGCAAAGGAATGATGAGAATGACGCGAAAGAAAACTATTCTTCCGGGCCGAGATGCTTTCAATTGAAGTTCATAACTGATATTTTTCTCCCGGTATTTACTGGATCTCGCATTGAAGGAAGAGATAGTTCCAATTTGATGGTGGCTTTGGTTGACACCTTAACTGGGGAAGTTGTTGGCGCTGGGGCTCAATCCTCTGCCAAGGTGGAAATTGTAGTGCTTGAGGGTGATTTTGAGGGTGGAGGTGATAATTACACCGCAGAGGAGTTTAGGAATAACATTGTAAGAGAGAGGGAAGGAAAGAAACCACTTCTAACAGGAGAGACACTTTTGAGTCTCAAAGATGGGATTGGTTCGGTAGGTGAGATTTCTTTCACTGACAATTCAAGCTGGACTAGAAGCCGTCGGTTCAGGCTCGGTGCAAGAATTATAGACGACAATGATGGACCGAGAATTCTTGAAGCAAAGACTGCGTCATTTGTTGTCAGAGATCACCGTGGAGAATTGTACAAGAAGCACCACCCTCCAACTCTGCAGGATGAAGTATGGAGATTGCAGAAAATTAGCAAGGATGGAGCCTATCATAAGCGCCTGAGCCAAGAAAAAATCGAGACGGTGAAAGATTTCCTAACTCAGCTTTATGTACAACCTTCAAGGCTTCGCAATATTCTTGGCCATGGTATGTCTACCAAAATGTGGGAAGCTATAATTGAGCATGCACAGACATGTGTGCTCGATAAGAAGATTTATGTGTACAAACCTCATGATTTGGAACAGAAAAGCGGAGTGGTTTTTGATGTTGTAGGACGAGTGATGGGGCTACTTTCAGATTACCAGTACGTTCCCATAGATAAGCTATCTGAAACTGATTTAGTACATTCATTCTGTACTCAGGTTGATGCTCACAACTTGGTTGTCTCTGCATACAAACACTGGGACGAAGTGGATTCCATTGATGATGAAACTTCACTTGTAGGTTTCTCTTCTCACCCACTTAGTTTTGTTTACACCCCGAGCTCACCCATGGAGGACCATTCTTATGGTAGCAAGTACTTGTCTTCTCCAAAATTTAGTGGCTTTGATTTCCCACCATCAAATGCCTATTCTTCAGACATAATTTCATCAATGGGTTCTATTGGGAATCCTAGCAGCTTGGACGATCATGCTTTGCAGGGTTTCGGTTCTATGGTTGTAAGATACGATCCGATGCCAAGTTCCCCAAATTTTGCCAACTCTTCTCTGATCTGCGATTCCGAGCCACTACACTCATCTTTCTTTGACGTGGATCATATGCAAGTTCTAGAGTCCGATGTGCAATGTAGCTCAATTTTAGAATCACGAGTGACAACAACTACTCTTCAAGGTGGCTCCTCATCGTGTGTTGCTCAAATGAGATGGGCTAAGGTATATGGTGTGCTAAAATGGTTCTTTTTGTGGAGATTTGTAATCAGAAGAAGAAACAAACTTGGCTTCAAGAGATACAAAGGTGTACAGAGTCGTGGAAAGGAAAAATTAGACTACGGTTGA 1809 43.23 MWVFLVHCNLRQFHRIVLCLYVLWPPMLSQKRNPDDGDGPADGDNPDDKRRKFCLTSVVRDAIALQSMQQLLEPVIRKVVREEVELALGKYITNVQRNDENDAKENYSSGPRCFQLKFITDIFLPVFTGSRIEGRDSSNLMVALVDTLTGEVVGAGAQSSAKVEIVVLEGDFEGGGDNYTAEEFRNNIVREREGKKPLLTGETLLSLKDGIGSVGEISFTDNSSWTRSRRFRLGARIIDDNDGPRILEAKTASFVVRDHRGELYKKHHPPTLQDEVWRLQKISKDGAYHKRLSQEKIETVKDFLTQLYVQPSRLRNILGHGMSTKMWEAIIEHAQTCVLDKKIYVYKPHDLEQKSGVVFDVVGRVMGLLSDYQYVPIDKLSETDLVHSFCTQVDAHNLVVSAYKHWDEVDSIDDETSLVGFSSHPLSFVYTPSSPMEDHSYGSKYLSSPKFSGFDFPPSNAYSSDIISSMGSIGNPSSLDDHALQGFGSMVVRYDPMPSSPNFANSSLICDSEPLHSSFFDVDHMQVLESDVQCSSILESRVTTTTLQGGSSSCVAQMRWAKVYGVLKWFFLWRFVIRRRNKLGFKRYKGVQSRGKEKLDYG* 603
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28801909 28807477 + Chy2G048220.1 Chy02g02555 222003
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02555 602 PANTHER CALMODULIN-BINDING PROTEIN 60 A 30 578 - -
Chy02g02555 602 Pfam Calmodulin binding protein C-terminal domain 342 410 IPR046829 -
Chy02g02555 602 PANTHER OS02G0177800 PROTEIN 30 578 IPR012416 GO:0005516
Chy02g02555 602 Pfam Calmodulin binding protein central domain 272 337 IPR046830 -
Chy02g02555 602 Pfam Calmodulin binding protein-like N-terminal domain 114 259 IPR046831 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02207 Chy-Chr2:26216629 Chy02g02555 Chy-Chr2:28801909 4.01E-106 dispersed
Chy02g02555 Chy-Chr2:28801909 Chy12g01428 Chy-Chr12:18307264 6.04E-73 dispersed
Chy02g02555 Chy-Chr2:28801909 Chy05g01056 Chy-Chr5:15108059 5.17E-58 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02555 - - csv:101211405 1148.65