Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02567 ATGCTGTCAAGTTCTTGCTTAAGTTTGTTAGAGTTATCATCTACGGATATGTTGGATTTTCCTCCTACACCGAGAACGGTACCACGGGTGATGACTGCTTCAGGAATATTTTCGGATAAGGACAGAGATTCGGAAGTTTCCTCCTCTAAATGCCGAGGGAGAAAAATTATCGTGGCAAATTTTCTCCCTCTTCATTCTAAAAAGGATCCAGATTCTGGAAAATGGAACTTCAGTTTTGATGAGGATTCGCTTTTGCTTCAGCTGAAGGATGGTTTCTCACCTGATGTAGATGTTATATATGTTGGATCGTTAAAGGTCGATGTTGATATCCGAGAGCAAGATGAGGTTTCTCAGAAATTGCTGGAGGAATTCAACTGTGCACCCACATTCATTCCTACATACCTTCAGAAACAATTCTATCATGGATTCTGCAAGCAACATTTGTGGCCACTTTTTCATTACATGATGCCAATTTCCCCTTATCATGGATCTCGATTTGATCGACATCTTTGGCAAGCGTACCTTTCAGCCAACAAAAGGTTTGCAGATAAAGTGATGGAGGTAATCAATTTAGAAGAAGATTATGTCTGGATTCATGATTACCACCTTATGGTTCTCCCTACTTTTTTGAGAAAACGCTACAGTCGAATTAAGCTTGGATTCTTCCTTCATAGTCTGTTTCCCTCATCAGAAATCTATCGAACTCTCCCTGTTAGAGACGAGATTCTGAGAGCATTACTTAATGCAGACCTAATCGGTTTCCATACATTCGATTATGCTCGCCACTTCCTATCTTGTTGTAGTAGACTACTTGGTTTAGAGTATGAATCTAAACGTGGATATCTCACGCTTGAGTATTTTGGCCGTACAATATACATCAAGATTTTACCTGTTGGAGTTCATATGGGTCGACTTGAATCTGCATTAAATCAACCACACACTTCAATCAAGGTCAAGGAAATCAAAGAAAATCTCAAAGGAAAAAAACTTATTCTTGGTGTTGATGACATAGACATATTTAAAGGTATTGGTCTGAAGCTATTAGCTATGGAACAGCTCTTGAACCAGCATCCAGAATTAAGGGGCAATATTGTTCTTGTGCAAATTCTAAATCCGGCACGGAGTAATGGGAATGATGTCCAGGAAGCAAAACGGGAAACTTATGAAATCACCAAAAGGATTAACAAGGTTTTCGGTTCTCCAGCATATGAACCTGTAATCTTGATTGATCATCCCATTTCTCCTCATGAGAAGATCGCATATTATGTATTAGCAGAGTGCTGCATTGTAAATGCTCTCAGGGATGGTATGAACTTAGTTCCCTATGAGTACATTGTTTGTCGACAAGGAACTTCAAAAATGGATGAAGTCTTGGAAGTCTCCCCGAATTCACCTCGTACCAGCACAATTGTGGTATCGGAATTTATAGGCTGTTCACCATCTCTAAGTGGTGCTGTCAGGGTAAATCCCTGGGATTTTGATGCTGTAGCTGATGCACTTTTTGCAGCTGTCTCCATGCCTGCTTTAGAGAAGCAACTGAGGCACGAAAAGCATTACCGATACGTTAGCTCTCACGATGTTGCTTATTGGGCTCGCAGTTTCTCACAAGATTTGGAGCGAGCATGCCGAGAACATTACAGTAAACGTTGCTGGGGCATTGGTTTTGGTTTAGGGTTTAGAATCTTGTCACTTTCTCCAAGTTTCAGGAAGCTTTCTATTGAACACATTGGCTCTGCCTATAGGAGTGCCTCTAGGAGGGCAATATTTTTGGATTATGATGGGACTGTGGTTTCTGAAACTTCGTTGATTAAGTCTCCATCACCTGAAGTTATTTCTATCATCAACAACCTTTGCATGGATTCAAAGAACACCGTTTTTATTGTCAGTGGCAGGGGGAAAGATTCTCTTGGTGCATGGTTCGCTTCGTGTAAGAATCTAGGTATTGCTGCCGAACATGGATTCTACTTGAGGTGGAAGAGGGACTCTGATTGGGAAGTTAGTCCATTAGCTGAAAACTTCGATTGGAAAAGGATTGCAGAACCTGTGATGAAACTATACACTGAGGCAACAGATGGCTCATACATAGAGACCAAAGACAGCGCATTGGTATGGCACCATCAAGATGCTGACCCTTATTTCGGTTCATGTCAGGCCATGGAGCTTTTGGACCACCTTGAAAATGTCCTTGCCAACGAACCCGTTGTTGTTAAAAGAGGTCAGCAGATAGTTGAAGTTAAACCTCAGGGTGTGACTAAAGGACTAGTTGCTGAAAGAGTTCTTTCCACAATGATAAATTCTAATAAAGCACCTGACTTTGTGCTGTGCATTGGAGATGATCGATCAGACGAAGACATGTTCGAGAGCATATCGAGCAAAAGCTATAGCTCATCCCTTGCTGGCCCCCCAAAGATATTTGCCTGTACTGTGGGCCAAAAGCCTAGCAAAGCCAAATACTATTTAGATGATACCACCGATGTTTTGACCCTGCTTCAAAGCCTGGCCACCCCTTCTACCCGTAAACTGAGGCCGAGTTTTGAAACTCGTGTTTTGTTTGAGGATGATATTTGA 2568 41.63 MLSSSCLSLLELSSTDMLDFPPTPRTVPRVMTASGIFSDKDRDSEVSSSKCRGRKIIVANFLPLHSKKDPDSGKWNFSFDEDSLLLQLKDGFSPDVDVIYVGSLKVDVDIREQDEVSQKLLEEFNCAPTFIPTYLQKQFYHGFCKQHLWPLFHYMMPISPYHGSRFDRHLWQAYLSANKRFADKVMEVINLEEDYVWIHDYHLMVLPTFLRKRYSRIKLGFFLHSLFPSSEIYRTLPVRDEILRALLNADLIGFHTFDYARHFLSCCSRLLGLEYESKRGYLTLEYFGRTIYIKILPVGVHMGRLESALNQPHTSIKVKEIKENLKGKKLILGVDDIDIFKGIGLKLLAMEQLLNQHPELRGNIVLVQILNPARSNGNDVQEAKRETYEITKRINKVFGSPAYEPVILIDHPISPHEKIAYYVLAECCIVNALRDGMNLVPYEYIVCRQGTSKMDEVLEVSPNSPRTSTIVVSEFIGCSPSLSGAVRVNPWDFDAVADALFAAVSMPALEKQLRHEKHYRYVSSHDVAYWARSFSQDLERACREHYSKRCWGIGFGLGFRILSLSPSFRKLSIEHIGSAYRSASRRAIFLDYDGTVVSETSLIKSPSPEVISIINNLCMDSKNTVFIVSGRGKDSLGAWFASCKNLGIAAEHGFYLRWKRDSDWEVSPLAENFDWKRIAEPVMKLYTEATDGSYIETKDSALVWHHQDADPYFGSCQAMELLDHLENVLANEPVVVKRGQQIVEVKPQGVTKGLVAERVLSTMINSNKAPDFVLCIGDDRSDEDMFESISSKSYSSSLAGPPKIFACTVGQKPSKAKYYLDDTTDVLTLLQSLATPSTRKLRPSFETRVLFEDDI* 856
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28885919 28888692 - Chy2G048340.1 Chy02g02567 222015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02567 855 TIGRFAM T6PP: trehalose-phosphatase 583 834 IPR003337 GO:0003824|GO:0005992
Chy02g02567 855 Gene3D Glycogen Phosphorylase B; 46 306 - -
Chy02g02567 855 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 587 788 IPR006379 -
Chy02g02567 855 Gene3D Glycogen Phosphorylase B; 307 523 - -
Chy02g02567 855 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 1 844 - -
Chy02g02567 855 Gene3D - 715 844 IPR023214 -
Chy02g02567 855 Gene3D - 585 702 IPR023214 -
Chy02g02567 855 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 54 543 - -
Chy02g02567 855 Pfam Trehalose-phosphatase 589 823 IPR003337 GO:0003824|GO:0005992
Chy02g02567 855 CDD GT20_TPS 54 539 IPR001830 GO:0003824|GO:0005992
Chy02g02567 855 Pfam Glycosyltransferase family 20 54 539 IPR001830 GO:0003824|GO:0005992
Chy02g02567 855 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 1 844 IPR001830 GO:0003824|GO:0005992
Chy02g02567 855 CDD HAD_TPP 587 826 - -
Chy02g02567 855 SUPERFAMILY HAD-like 586 834 IPR036412 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02567 Chy-Chr2:28885919 Chy06g02157 Chy-Chr6:25872096 0 dispersed
Chy02g00712 Chy-Chr2:4318117 Chy02g02567 Chy-Chr2:28885919 1.18E-07 transposed
Chy06g00852 Chy-Chr6:6145888 Chy02g02567 Chy-Chr2:28885919 1.03E-09 transposed
Chy06g01252 Chy-Chr6:11513486 Chy02g02567 Chy-Chr2:28885919 3.91E-07 transposed
Chy10g00918 Chy-Chr10:14841488 Chy02g02567 Chy-Chr2:28885919 0 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02567 K16055 - csv:101209676 1682.92