Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02569 ATGCATAACATAGCGTATTCTCGATTAGGTGGACTTCAGAAATCTCTTACTCTTTACAGAAAAGTTCCATGGTGGGATAAAATCTTAGAACCCGATTCCGAGTTTGTTGTTCGATGGAATCTCATTTTTCTCGTTACCTGTTTGTTTGCTCTCTTCATCGACCCTCTTTACTTTTACCTTATCATCATCGGCGGCCCTGGTTGTATGCGTTTCAACACTCGCCTTGGTATCGTCATCACTTTCTTCCGCACCATTGTCGATTTCTTCTCTCTGTTTCACATTTCTATGAAGTTTCGCACCGCCTTCGTGGCCCCTAATTCTAGAGTTTTTGGCCGTGGTGATCTCGTTATGGACCCTTCTGCCATTGCTATGCGCTACCTCAAGAAGGATTTTCTAGTTGATCTTGCTGCTACATTGCCTCTGCCTCAGATTGTGATTTGGTTTGTTCTTCCAGCATTGAAAAACCCATCAGCATCCCATGCAAACCACACTCTTGCATTGATTGTCCTCATTCAGTATGCACCCAGGCTGTTTGTTATATTTCCTCTGAACAGACAGATCAATAAAACCACTGGTGCGATTGCCAAAAATGCTTGGGCTGGTGCTGCCTACAATCTCCTTCTCTATTTGCTTGCTAGCCATGTTATAGGAGCTGCATGGTATGTAGCATCAATTCAACGTCAAGACGAGTGTTGGAAATTAGAATGTAGGAAGGAGATGAATAAAACTCACTCTCCTTCTTGTAAGCCTATTTTTCTTGATTGTGAAAGTTTGGATAAGCCTGAAAGAAAAGCTTGGCTAAGATCCACTCATGTTCTTACAAATTGTGATGCATTCAATGATGAAAAGAACTTTGAGTTTGGAATGTTTGCTGATGCGTTTACTGATGAAGTTGCTTCTGCAGTATTTTATGAGAAGTACTTCTACTGCCTTTGGTTTGGTTTAAAGAGTTTGAGATATTACTCCCATCAATGGAGGACTTGGGGATCTTGTTTCATACAAGCTGCTTGGAGAAGATATGTGAAAAGAAAGTTAGCTATGGAATTGGCAAGACAAGAAGAGCTTTATTACACAACCATTTTGGACCAAGATCATCATAGCAGCCATGGCAATGAAGTGATGATGGGAAGTGAAGGAGTTGGTGAAACCAGTAGTACTCATGGGTCGTCTAAAACTACTATTACTACAAATAACAAAAAACAAAATCTTGGAATAACAATGTTGGCTTCAAAATTTGCAGCAAATACAAGAAGAGGAGTTCATCAAAAGTTGGCTGCACTTGGTCCTGATGCTGCTAGCTTGAAAATGCCCAAGCTGTTTAAGCCTGATGAACCTGACTTCTCTGCTTTCCAAGATGATAATTGA 1365 40.73 MHNIAYSRLGGLQKSLTLYRKVPWWDKILEPDSEFVVRWNLIFLVTCLFALFIDPLYFYLIIIGGPGCMRFNTRLGIVITFFRTIVDFFSLFHISMKFRTAFVAPNSRVFGRGDLVMDPSAIAMRYLKKDFLVDLAATLPLPQIVIWFVLPALKNPSASHANHTLALIVLIQYAPRLFVIFPLNRQINKTTGAIAKNAWAGAAYNLLLYLLASHVIGAAWYVASIQRQDECWKLECRKEMNKTHSPSCKPIFLDCESLDKPERKAWLRSTHVLTNCDAFNDEKNFEFGMFADAFTDEVASAVFYEKYFYCLWFGLKSLRYYSHQWRTWGSCFIQAAWRRYVKRKLAMELARQEELYYTTILDQDHHSSHGNEVMMGSEGVGETSSTHGSSKTTITTNNKKQNLGITMLASKFAANTRRGVHQKLAALGPDAASLKMPKLFKPDEPDFSAFQDDN* 455
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28909271 28912672 + Chy2G048360.1 Chy02g02569 222017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02569 454 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 317 450 - -
Chy02g02569 454 SUPERFAMILY Voltage-gated potassium channels 31 315 - -
Chy02g02569 454 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 317 450 - -
Chy02g02569 454 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 318 - -
Chy02g02569 454 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 16-RELATED 1 318 - -
Chy02g02569 454 Pfam Ion transport protein 39 316 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02569 Chy-Chr2:28909271 Chy04g00288 Chy-Chr4:2602983 2.14E-118 dispersed
Chy02g02177 Chy-Chr2:25981072 Chy02g02569 Chy-Chr2:28909271 2.91E-12 transposed
Chy02g02569 Chy-Chr2:28909271 Chy04g01471 Chy-Chr4:21377399 1.32E-180 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02569 K05391 - csv:101209760 637.876