Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02570 ATGGCTGCTGCTCGTAGAGGAATCTCTTCTTTACTCTCTCGTTCTATCTTAGCTTCTTCTTCTTCTTCTACTGTTAATGGATTTAGTTCTCTTCTTCAATCTCATGGAAGAGTTTCAAGGTTCCTTGGAAGAGGATATGAATTTAGCACATCCGCTTTGGCAGAGGAGGAACTTATCACTCCTCCTGTTCAGATAAATTACACTCAAAATCTGATCAATGGCCAGTTTGTTGATTCTGCATCCGGAAAAACGTTTCCAACTTACGATCCTCGCACTGGGGAAGTGATTGCTCATGTTGCCGAGGGTGATGCTGAGGATATCAACCGTGCAGTATCAGCTGCACGAAAGGCTTTCGACGAGGGGCCATGGCCAAGAATGTCTGCTTATGAACGATCGAGGATATTGTTACGGTTTGCAGATTTGATTGAGAAACATACTCCTGAACTTTCAGCATTGGAAACATGGAACAATGGGAAACCTTACGAACAATCGCTTAAATCTGAATTACCATTACTCGTGCGCTTGTTTCACTATTATGCAGGCTGGGCAGACAAAATTCATGGATTAACAGTTCCAGCTGATGGAAATCATCATGTTCAAGTATTGCATGAACCAATTGGAGTTGCAGGACAAATAATTCCATGGAACTTTCCTCTTATTATGTTTGCTTGGAAAGTTGGTCCTGCTTTAGCTTGTGGCAACACCGTTGTCCTAAAAACTGCAGAGCAAACACCTCTGACTGCTCTTTATGTGGCTAAGTTATTACACGAGGCAGGTCTCCCTCCAGGGGTTTTAAATATCGTTTCAGGCTATGGTCCGACCGCAGGTGCTGCCCTTGCTAGCCATATGGATGTGGACAAGCTAGCTTTCACTGGATCGACAAGCACGGGAAAAGTTGTACTTGAATTGGCAGCAAAGAGCAATTTGAAGCCAGTGACACTAGAGCTTGGAGGGAAATCACCTTTCATTGTTTGTGATGATGCAGATGTTGATAAGGCTGTGGAGCTTGCTCATTTTGCTCTTTTTTTCAATCAGGGGCAATGTTGTTGTGCCGGGTCTCGTACTTTTGTGCACGAGCGTGTCTACGAGGAATTTGTCGAAAAGTCGAAGGCACGTGCCCAAAGACGTGTTGTTGGTGACCCTTTCAAGAAGGGTGTTGAACAGGGTCCTCAGATTGACTCGGAGCAATTCGAAAAAGTCCTAAGATATATCAAATCTGGCATTGAAAGCAATGCTACTCTGGAATGTGGGGGTGGTAGACTTGGGTCCAAGGGATACTTCATCGAGCCAACAGTTTTCTCAAATGTTAAGGACGATATGTTGATAGCAAAGGATGAAATCTTTGGTCCAGTACAATCCATCCTGAAATTCAAGGACATTGATGAAGTAATTCATAGAGCAAACTCAACTCGTTACGGTCTAGCATCAGGAGTTTTCACATCGAACATCGACACAGCCAACACATTAATACGAGGATTGAGAACGGGGACCGTGTGGGTGAATTGCTTCGACATCTTCGACGCCGCAATACCATTTGGCGGGTATAAGATGAGTGGAATAGGAAGGGAGAAGGGAATTTACAGCCTCCAAAACTACTTACAAGTAAAGGCTGTTGTTACACCTCTCAAGAATCCAGCATGGTTGTGA 1647 44.08 MAAARRGISSLLSRSILASSSSSTVNGFSSLLQSHGRVSRFLGRGYEFSTSALAEEELITPPVQINYTQNLINGQFVDSASGKTFPTYDPRTGEVIAHVAEGDAEDINRAVSAARKAFDEGPWPRMSAYERSRILLRFADLIEKHTPELSALETWNNGKPYEQSLKSELPLLVRLFHYYAGWADKIHGLTVPADGNHHVQVLHEPIGVAGQIIPWNFPLIMFAWKVGPALACGNTVVLKTAEQTPLTALYVAKLLHEAGLPPGVLNIVSGYGPTAGAALASHMDVDKLAFTGSTSTGKVVLELAAKSNLKPVTLELGGKSPFIVCDDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYEEFVEKSKARAQRRVVGDPFKKGVEQGPQIDSEQFEKVLRYIKSGIESNATLECGGGRLGSKGYFIEPTVFSNVKDDMLIAKDEIFGPVQSILKFKDIDEVIHRANSTRYGLASGVFTSNIDTANTLIRGLRTGTVWVNCFDIFDAAIPFGGYKMSGIGREKGIYSLQNYLQVKAVVTPLKNPAWL* 549
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28916466 28919464 + Chy2G048370.1 Chy02g02570 222018
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02570 548 CDD ALDH_F2BC 65 540 - -
Chy02g02570 548 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 314 321 IPR029510 GO:0016491
Chy02g02570 548 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 320 509 IPR016163 GO:0016620
Chy02g02570 548 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 342 353 IPR016160 GO:0016491
Chy02g02570 548 Pfam Aldehyde dehydrogenase family 76 538 IPR015590 GO:0016491
Chy02g02570 548 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 82 538 IPR016162 GO:0016491
Chy02g02570 548 PANTHER ALDEHYDE DEHYDROGENASE-RELATED 40 548 - -
Chy02g02570 548 PANTHER ALDEHYDE DEHYDROGENASE FAMILY 2 MEMBER B4, MITOCHONDRIAL 40 548 - -
Chy02g02570 548 SUPERFAMILY ALDH-like 64 542 IPR016161 GO:0016491
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g01912 Chy-Chr2:22294797 Chy02g02570 Chy-Chr2:28916466 0 dispersed
Chy02g02550 Chy-Chr2:28760247 Chy02g02570 Chy-Chr2:28916466 7.37E-118 dispersed
Chy02g02570 Chy-Chr2:28916466 Chy11g01046 Chy-Chr11:14923094 6.88E-110 dispersed
Chy12g01328 Chy-Chr12:17619479 Chy02g02570 Chy-Chr2:28916466 2.48E-15 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02570 K00128 - csv:101209430 1058.13