Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02571 ATGAAAGAGAACAATGATGGGTTTGTTCGTGCGGATCAGATTGATCTCAAGAGCTTAGATGAACAGCTTGAGAGGCATCTTAGTAGAGCTTTGACTATGGAGAAGAACAAGAAGAAAGACGAAGATACCGGCAATAGCTTTCTCACTTCTGCTCCTATCGCTCGTAGTAGGTCTACTAAAGTCGCTGCTAAGGACCGGCAAGAGTGGGAGATCGATCCCTCTAAATTGATTATCAAGAGCGTCATTGCTCGTGGTACTTTTGGCACAGTCCACCGCGGCGTTTATGACGGACTAGATGTTGCCGTCAAGTTGCTGGATTGGGGAGAAGAAGGTCACAGGACAGAAGCTGAAATTGCTTCACTAAGGGCGGCTTTTAAACAAGAAGTTGCTGTTTGGCATAAACTAGAGCATCCAAATGTTACTAAGTTTATAGGGGCAACAATGGGCTCAGCGGAGTTACAGATCCAAACTGAAAATGGTCTAATAGGCATGCCAAGCAACATATGTTGTGTTGTGGTGGAATATCTTGCCGGGGGTGCTCTTAAATCTTATCTCATAAAAAACAGGAGAAGAAAGCTAGCTTTCAAGGTGGTTGTCCAGCTGGCCCTTGATCTTGCTAGAGGGTTGAGTTACCTTCATTCGCAGAAAATCGTTCACAGAGACGTAAAGACCGAAAACATGCTATTGGACAAAACACGTACAGTCAAAATTGCTGATTTTGGTGTTGCTAGAGTTGAGGCCTCAAATCCCAATGACATGACTGGGGAGACTGGGACACTTGGTTACATGGCTCCAGAGGTTCTCAATGGCAACCCATATAACAGGAAATGTGATGTGTACAGCTTCGGTATCTGCCTGTGGGAAATTTATTGCTGTGACATGCCATATCCCGACCTTAGTTTTTCTGAAGTAACCTCTGCCGTGGTTCGTCAGAATCTGAGGCCAGAGATACCGAGATGTTGCCCTAGCTCTCTAGCAAATGTAATGAAGCGTTGCTGGGATGCAACCCCAGACAAGCGACCCGAGATGGATGAAGTAGTTTCCATGTTGGAGGCCATTGACACTTCCAAGGGTGGAGGTATGATTCCTGTTGATCAAGCTCAGGGTTGTCTATGCTTTCGAAAATATAGAGGGCCCTAA 1140 45.61 MKENNDGFVRADQIDLKSLDEQLERHLSRALTMEKNKKKDEDTGNSFLTSAPIARSRSTKVAAKDRQEWEIDPSKLIIKSVIARGTFGTVHRGVYDGLDVAVKLLDWGEEGHRTEAEIASLRAAFKQEVAVWHKLEHPNVTKFIGATMGSAELQIQTENGLIGMPSNICCVVVEYLAGGALKSYLIKNRRRKLAFKVVVQLALDLARGLSYLHSQKIVHRDVKTENMLLDKTRTVKIADFGVARVEASNPNDMTGETGTLGYMAPEVLNGNPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLANVMKRCWDATPDKRPEMDEVVSMLEAIDTSKGGGMIPVDQAQGCLCFRKYRGP* 380
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 28921622 28924822 - Chy2G048380.1 Chy02g02571 222019
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02571 379 Gene3D Phosphorylase Kinase; domain 1 65 159 - -
Chy02g02571 379 ProSiteProfiles Protein kinase domain profile. 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02571 379 CDD STKc_MAP3K-like 82 350 - -
Chy02g02571 379 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 1 373 - -
Chy02g02571 379 PRINTS Tyrosine kinase catalytic domain signature 173 186 IPR001245 GO:0004672|GO:0006468
Chy02g02571 379 PRINTS Tyrosine kinase catalytic domain signature 211 229 IPR001245 GO:0004672|GO:0006468
Chy02g02571 379 PRINTS Tyrosine kinase catalytic domain signature 277 299 IPR001245 GO:0004672|GO:0006468
Chy02g02571 379 PRINTS Tyrosine kinase catalytic domain signature 321 343 IPR001245 GO:0004672|GO:0006468
Chy02g02571 379 Pfam Protein tyrosine and serine/threonine kinase 78 350 IPR001245 GO:0004672|GO:0006468
Chy02g02571 379 SMART serkin_6 76 353 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02571 379 MobiDBLite consensus disorder prediction 30 44 - -
Chy02g02571 379 PANTHER - 1 373 - -
Chy02g02571 379 Gene3D Transferase(Phosphotransferase) domain 1 177 366 - -
Chy02g02571 379 Coils Coil 16 36 - -
Chy02g02571 379 SUPERFAMILY Protein kinase-like (PK-like) 56 350 IPR011009 -
Chy02g02571 379 MobiDBLite consensus disorder prediction 30 50 - -
Chy02g02571 379 ProSitePatterns Serine/Threonine protein kinases active-site signature. 217 229 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01553 Chy-Chr1:21437707 Chy02g02571 Chy-Chr2:28921622 0 dispersed
Chy02g02571 Chy-Chr2:28921622 Chy06g00556 Chy-Chr6:3814007 4.54E-172 dispersed
Chy04g00373 Chy-Chr4:3296687 Chy02g02571 Chy-Chr2:28921622 1.09E-18 transposed
Chy02g02571 Chy-Chr2:28921622 Chy04g01464 Chy-Chr4:21251658 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71104 PF07714 PK_Tyr_Ser-Thr 3.80E-63 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02571 - - csv:101209182 768.844