Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02597 ATGTTAATGCCTGTAAATTCATGGACCCTCCCCTCATCTATCCTAATCCTTTGTTTTTCAGTCTTATATCTTTTCTTCCCTTTTGGAGTTTCCGCCATTAATGAACAGGGTCAAGCTCTACTCAATTGGAAGCTAAGTTTTAATGGATCAAACGACGCTCTATATAATTGGAACCCCAACAATGAAAATCCATGTGGGTGGTTTGGAATCAGTTGCAATAGAAATAGAGAAGTAGTGGAAGTAGTATTGAGATACGTGAACTTACCAGGAAAGCTTCCATTGAATTTCTCTCCATTGTCATCCTTGAACAGGCTTGTCTTGTCTGGATTGAATCTCACTGGTACAATTCCTAAAGAGATCAGTGCTCTAACCCAGTTGCGTACCTTGGAACTCAGTGACAATGGCTTAACTGGAGAAATTCCAAGTGAAATATGCAATTTGGTAGATCTTGAACAGCTTTACCTCAATTCAAATCTACTCGAAGGGTCAATACCTGCAGGTATCGGAAATCTCACAAATTTGAAGGAGCTGATTCTGTATGATAATCAGTTGAGTGGTGAAATTCCCATTAGCATAGGGAATTTGAAGCAGCTTGAAGTGATTAGAGCTGGAGGAAACAAGAACTTACATGGTTCTGTGCCGGAAGAAATTGGTAATTGCAGTAGTTTGGTGATTCTTGGTTTAGCTGAAACAAGCATCTCCGGCTTTCTTCCATCTAGTCTTGGCCGACTGAAGAAGCTTCAAACATTGGCAATCTATACTGCACTTCTCTCCGGCCAGATTCCTCATGAACTTGGTGACTGCACCGAGCTTCAAAACATCTATCTCTACGAGAATTCGCTCTCCGGTTCCATCCCAAGCACATTAGGAAGGCTACAGAATCTTCAGAGTGTGCTAATATGGCAGAACAGTTTGGTTGGTGTAATACCGCCGGAGCTCGGTGGGTGTGACCAATTGTTCGTCATCGACATTTCAATTAATTCTCTGACGGGAAGCATTCCTTCAACATTTGGTAATTTAACATTGCTCCAAGAATTGCAGCTGAGCACAAATCAATTATCAGGTGATATTCCGAAGGAGATCGGAAATTGTCCGAGAATCACTCACATCGAGCTTGATAACAACCAGCTCACTGGTACGATTCCCTCTGAATTGGGAAATCTCACCAATCTTACATTGCTGTTCTTGTGGCAAAACAAGCTTGAGGGAAGTATTCCACCCACCATTTCGAATTGTCGCAATCTCGAGGCGTTGGATTTATCACTGAATGCCTTGACAGGTTCAATTCCGCCAGGAATTTTCCAGTTGAAAAAACTTTCTAAGCTTCTGCTTCTTTCCAACAACCTCTCCGGTGTGATACCCCCGGCAATAGGTAACTGTTCGGCTCTGTTTCGGTTCAGAGCTAACAACAACAAGCTCAGCGGAGAAATTCCGCCGGAGATTGGGAATTTGAAGAACTTGATTTTCCTAGACCTCGGAAACAATCACCTAACTGGAGCGTTGCCTCCGGAGATTTCCGGCTGTCGAAATTTGACATTCCTTGATATGCATTCCAACTCTCTCAAATTTCTTCCACAAGAATTCAACCAGCTTTCTTCCCTCCAGTACGTTGATCTCTCAAATAATCTAATCGAAGGGTCGCCGAATCCGAGTTTTGGATCTTTCAACTCGCTCACGAAACTCGTTCTCTCAAACAACCGCTTCTCTGGACCTATACCAACTGAAATCGGTACCTGCTTGAAACTGCAGTTACTGGATTTAAGTTGCAATCAGCTTTCCGGAAACATTCCTCCAAGCCTAGGCAAGATTCCTTCACTAGAAATTAGCCTCAATCTGAGCTTAAACCAACTAACCGGCGAGATTCCGTCGGAGTTGGCAAATTTAGACAAGCTAGGATCATTGGACCTCTCTTACAACCAACTCTCAGGCGACCTCCACATTCTCGCAGACATGCAGAATCTCGTAGTCCTTAATGTATCACACAACAATTTCTCGGGACGCGTACCAGAGACGTCATTCTTCACGCAGCTCCCTCTGAGCGTCCTATCGGGTAACCCGGACTTGTGCTTCGCCGGCGAAAAATGCTACACCGACAACCACAGCGGCGGCGGTCACCACACAATAGCTGCTCGAGTGGCAATGGTGGTGTTACTGTGCACGGCATGTGCACTGCTATTAGCAGCAGTTTATATCATTCTCAAAGATAGACATTCATGTCGAAGATGCATCAATGGGTCCCGCGGTGAAGATCCAGACACCGCCTTCGACAGCGACTTGGAGCTTGGTTCAGGTTGGGAAGTGACACTATACCAGAAGCTCGACCTCTCAATCTCCGACGTAATCAAGTGCTTAACGCCGGCAAACGTCATCGGCCGTGGCAAGACCGGCGTGGTGTACAGAGCATGCATCTCATCAGGATTAATAATCGCTGTGAAGCGATTCCGATCATCGGATAAGTTCTCAGCGGCGGCATTTTCATCTGAAATCGCAACATTGGCGAGGATCCGGCATCGGAACATCGTCCGATTGCTAGGGTGGGGGGCGAATCGGAGAACGAAGTTGCTGTTCTACGATTACTTGCCGAATGGAAATTTGGGCGCGTTGCTACACGAAGGAAATGGGCGCGTGGGGCTAGACTGGGAAAGTAGATTCAAGATAGCGCTGGGCGTGGCGGAGGGATTGGCTTATTTGCACCACGACTGCGTGCCGGCGATATTACACCGGGACGTGAAGGCTCACAATATTCTGTTGGGAGATCGCTACGAGGCGTGTTTGGCGGACTTTGGGCTCGCTCGATTGGTTGAAGATGGTCCAAGCGGTTCGTCTTCCGCGAACCCACAGTTCGCTGGCTCCTACGGCTATTTTGCACCTGATTCGAAACTTCAGGGTCAACCTGACTCACAAATACAGGAGATTCTACAAGTATTGGGGATTTCTTTACTTTGTACTAGTGACCGCTCCGAAGACCGACCAACAATGAAAGACGTGGCGGCTCTTTTAAGAGAGATCCAACAGGATCAAATTGGGACAGCGACGGAGGCTGCAGACAAGCCTCCACGAAAGGATAGCAATGCAACAAGTTTTGATACAACAACATCGTTTTCTTCTTCCTCTTCTATGACTCCTGCAAGTCACTTGCTTTTTACATTACCCCTTCAAGAATCATCACGTTGTTCTTATGCTTCACTATCATCGTCAGGCGCGTATATTTCACGCAAATAA 3222 46.09 MLMPVNSWTLPSSILILCFSVLYLFFPFGVSAINEQGQALLNWKLSFNGSNDALYNWNPNNENPCGWFGISCNRNREVVEVVLRYVNLPGKLPLNFSPLSSLNRLVLSGLNLTGTIPKEISALTQLRTLELSDNGLTGEIPSEICNLVDLEQLYLNSNLLEGSIPAGIGNLTNLKELILYDNQLSGEIPISIGNLKQLEVIRAGGNKNLHGSVPEEIGNCSSLVILGLAETSISGFLPSSLGRLKKLQTLAIYTALLSGQIPHELGDCTELQNIYLYENSLSGSIPSTLGRLQNLQSVLIWQNSLVGVIPPELGGCDQLFVIDISINSLTGSIPSTFGNLTLLQELQLSTNQLSGDIPKEIGNCPRITHIELDNNQLTGTIPSELGNLTNLTLLFLWQNKLEGSIPPTISNCRNLEALDLSLNALTGSIPPGIFQLKKLSKLLLLSNNLSGVIPPAIGNCSALFRFRANNNKLSGEIPPEIGNLKNLIFLDLGNNHLTGALPPEISGCRNLTFLDMHSNSLKFLPQEFNQLSSLQYVDLSNNLIEGSPNPSFGSFNSLTKLVLSNNRFSGPIPTEIGTCLKLQLLDLSCNQLSGNIPPSLGKIPSLEISLNLSLNQLTGEIPSELANLDKLGSLDLSYNQLSGDLHILADMQNLVVLNVSHNNFSGRVPETSFFTQLPLSVLSGNPDLCFAGEKCYTDNHSGGGHHTIAARVAMVVLLCTACALLLAAVYIILKDRHSCRRCINGSRGEDPDTAFDSDLELGSGWEVTLYQKLDLSISDVIKCLTPANVIGRGKTGVVYRACISSGLIIAVKRFRSSDKFSAAAFSSEIATLARIRHRNIVRLLGWGANRRTKLLFYDYLPNGNLGALLHEGNGRVGLDWESRFKIALGVAEGLAYLHHDCVPAILHRDVKAHNILLGDRYEACLADFGLARLVEDGPSGSSSANPQFAGSYGYFAPDSKLQGQPDSQIQEILQVLGISLLCTSDRSEDRPTMKDVAALLREIQQDQIGTATEAADKPPRKDSNATSFDTTTSFSSSSSMTPASHLLFTLPLQESSRCSYASLSSSGAYISRK* 1074
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29177860 29181949 - Chy2G048640.1 Chy02g02597 222045
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02597 1073 Gene3D Transferase(Phosphotransferase) domain 1 860 970 - -
Chy02g02597 1073 Gene3D Ribonuclease Inhibitor 35 146 IPR032675 -
Chy02g02597 1073 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 4 958 - -
Chy02g02597 1073 Gene3D Ribonuclease Inhibitor 228 331 IPR032675 -
Chy02g02597 1073 MobiDBLite consensus disorder prediction 1010 1041 - -
Chy02g02597 1073 ProSitePatterns Protein kinases ATP-binding region signature. 790 812 IPR017441 GO:0005524
Chy02g02597 1073 SUPERFAMILY Protein kinase-like (PK-like) 775 1000 IPR011009 -
Chy02g02597 1073 Gene3D Ribonuclease Inhibitor 428 697 IPR032675 -
Chy02g02597 1073 ProSitePatterns Serine/Threonine protein kinases active-site signature. 905 917 IPR008271 GO:0004672|GO:0006468
Chy02g02597 1073 MobiDBLite consensus disorder prediction 1024 1041 - -
Chy02g02597 1073 SMART LRR_typ_2 123 147 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 413 436 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 388 412 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 340 364 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 171 195 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 484 508 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 555 579 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 509 530 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 651 675 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 292 316 IPR003591 -
Chy02g02597 1073 SMART LRR_typ_2 531 554 IPR003591 -
Chy02g02597 1073 PANTHER OS01G0170300 PROTEIN 4 958 - -
Chy02g02597 1073 SUPERFAMILY L domain-like 56 401 - -
Chy02g02597 1073 ProSiteProfiles Protein kinase domain profile. 784 1073 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02597 1073 Pfam Protein kinase domain 788 958 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02597 1073 Pfam Leucine rich repeat 319 377 IPR001611 GO:0005515
Chy02g02597 1073 SUPERFAMILY RNI-like 333 675 - -
Chy02g02597 1073 SMART LRR_sd22_2 388 417 - -
Chy02g02597 1073 SMART LRR_sd22_2 123 149 - -
Chy02g02597 1073 SMART LRR_sd22_2 628 653 - -
Chy02g02597 1073 SMART LRR_sd22_2 171 197 - -
Chy02g02597 1073 Pfam Leucine rich repeat N-terminal domain 34 73 IPR013210 -
Chy02g02597 1073 Pfam Leucine Rich Repeat 125 147 IPR001611 GO:0005515
Chy02g02597 1073 Pfam Leucine Rich Repeat 533 555 IPR001611 GO:0005515
Chy02g02597 1073 Gene3D Phosphorylase Kinase; domain 1 768 859 - -
Chy02g02597 1073 PANTHER OS01G0170300 PROTEIN 958 1020 - -
Chy02g02597 1073 Gene3D Ribonuclease Inhibitor 332 427 IPR032675 -
Chy02g02597 1073 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 958 1020 - -
Chy02g02597 1073 SMART serkin_6 784 1020 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02597 1073 Gene3D Ribonuclease Inhibitor 147 224 IPR032675 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy01g01009 Chy-Chr1:10590008 Chy02g02597 Chy-Chr2:29177860 2.82E-09 dispersed
Chy02g02597 Chy-Chr2:29177860 Chy12g01251 Chy-Chr12:17129765 0 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71105 PF00069 Pkinase 5.50E-29 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02597 - - csv:101206847 1865.51