Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02613 ATGGAACCACGACGTCGACGCCGTCCTCCGTTACTTCTACTTCAGCTTTGTATCTTCTTTCTCTTCTTCTTTTCTTCTTATGCAGTCGATTTCCTCTTCAATTCTTTCTCAAGCGAATCGAATGGCACTGATTTCATTCTCATTAGCGACGCCAGATTCGATTCCCCTGTAATCCGCCTCAACAACGACTCAAACCAGAATTCAATCGGTCGTGTTTTCTATCACACGAAGCTAACTATGAAACCCACTTCGAATTCCTCAACGATTTCTTCTTTTTCAACTTCTTTTGTGTTCTCGATCTTGCTGGAAGTCGCTACTAGTCCAGGCTTCGGTTTGGCCTTCGTTCTCTCCAATTCTACTTCCCCTCCCGGTGTCATCGCCGGCCAATACTTTGGTCTCTTTACTAATGCAACAACCCACGTCGTTGCCCCACTTCTCGCTGTCGAATTCGACACTGGCCGAAACACGGAGTTCAACGACCCAGATGATAGTCACATCGGAATCGATTTGAACAGTGTGTTGTCGAGTAAAATACACGGCGCTGGGTATTTTGATTCTAATGGGCAATTTATTCCGATTCAGATGAGAAATGGGCAAAACCTTCGCGCTTGGATCGAATTCGATGGAGCAACTTTCGAAATTAATGTCACAGTCGCCCCAATTGGAATTCCTCGTCCTTCGATACCCACTTTGAGTTTTAGAGATCCTTTAATTGCGAATTATGTATCGACTGAAATGTTTGTGGGATTTTCAGCATCGAAGACGAAATGGGTTGAGGCGCAAAGGATTTTAGCTTGGAGTTTTAGTGACACTGGGGTTGCTAGAGACATTAACACCACAAATTTCCCTGTGTTTATGAGAGAATCACCACCATCTCCTTTGTCGCCGGGATCGGTTGCCGCGGAGGAAGAAGAAATGGTGCTTATTGATTGGGTGAGAGATCTTTACTCTGCCGGCCGGTTGATTGCGGCGGCAGACTCGAGAATCAGAGAAGAGTATGAGACTGAAGAGATTGAATTGATGTTAAAGCTTGGTTTAGCTTGTTGTCATCCGAACCCTGAACGCCGGCCTTCAATGAAAGAGGTGGTGCCAGTTTTGATCGGAGAACAACCATCAGCGGAGTCGGTTGAGCTTTTATCAGGATTGGCCGGTGGCATGGTTGACGACACTCGAGATGTTGATATGTGA 1188 45.88 MEPRRRRRPPLLLLQLCIFFLFFFSSYAVDFLFNSFSSESNGTDFILISDARFDSPVIRLNNDSNQNSIGRVFYHTKLTMKPTSNSSTISSFSTSFVFSILLEVATSPGFGLAFVLSNSTSPPGVIAGQYFGLFTNATTHVVAPLLAVEFDTGRNTEFNDPDDSHIGIDLNSVLSSKIHGAGYFDSNGQFIPIQMRNGQNLRAWIEFDGATFEINVTVAPIGIPRPSIPTLSFRDPLIANYVSTEMFVGFSASKTKWVEAQRILAWSFSDTGVARDINTTNFPVFMRESPPSPLSPGSVAAEEEEMVLIDWVRDLYSAGRLIAAADSRIREEYETEEIELMLKLGLACCHPNPERRPSMKEVVPVLIGEQPSAESVELLSGLAGGMVDDTRDVDM* 396
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29309257 29311227 - Chy2G048800.1 Chy02g02613 222061
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02613 395 PANTHER - 302 383 - -
Chy02g02613 395 PANTHER - 13 300 - -
Chy02g02613 395 SUPERFAMILY Protein kinase-like (PK-like) 305 364 IPR011009 -
Chy02g02613 395 ProSitePatterns Legume lectins beta-chain signature. 146 152 IPR019825 -
Chy02g02613 395 Gene3D Transferase(Phosphotransferase) domain 1 285 377 - -
Chy02g02613 395 CDD lectin_legume_LecRK_Arcelin_ConA 29 272 IPR001220 GO:0030246
Chy02g02613 395 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 13 300 - -
Chy02g02613 395 Pfam Legume lectin domain 29 281 IPR001220 GO:0030246
Chy02g02613 395 Gene3D - 27 284 - -
Chy02g02613 395 SUPERFAMILY Concanavalin A-like lectins/glucanases 28 287 IPR013320 -
Chy02g02613 395 PANTHER L-TYPE LECTIN-DOMAIN CONTAINING RECEPTOR KINASE S.1 302 383 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02613 Chy-Chr2:29309257 Chy08g00734 Chy-Chr8:15111259 2.70E-43 dispersed
Chy02g02613 Chy-Chr2:29309257 Chy08g00732 Chy-Chr8:15093249 9.64E-54 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02613 - - cmo:103502376 546.584