Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02618 ATGGAAGCTGGGAGTAGATTTTACTCTGCCACAGATGAGTTCAGATTGGAAGCCAAATGGTTGGTTGATCCCAAACATCTATTTGTTGGACCTAGAATTGGAGAGGGAGCTCATGCCAAAGTTTACGAGGGCAAATATAAGAACCAGACTGTTGCTATCAAAATTGTTCATAAAGGGGAAACAGTTGATGAGGTTGCAAAGAAAGAGGCTCGGTTTGCTCGAGAGGTTGCAATGTTGTCTAGAGTACAACATAAAAATCTTGTCAAGTTTATTGGTGCCTGCAAGGAGCCTGTAATGGTGATAGTAACCGAACTTTTATTAGGAGGGACCTTACGAAAGTACCTGCTCAATATGCGCCCACGGTGCTTGGACACACGTCTGGCAGTTGGTTTTGCGCTTGATATTGCTCGTGCTATGGAATGTCTTCACTCACATGGCATCATACACCGTGATTTGAAGCCTGAGAACCTTCTGTTGACAGCAGATCACAAAACAGTTAAATTAGCTGATTTTGGTTTGGCAAGAGAAGAGTCGTTGACGGAGATGATGACTGCAGAGACGGGAACCTACCGTTGGATGGCTCCAGAGTTGTACAGCACTGTTACCCTAAGGCAAGGGGAGAAGAAACACTACAACCATAAAGTGGATGCCTATAGCTTTGCTATTGTGTTATGGGAACTGCTACACAACAAGTTGCCATTTGAAGGCATGTCAAATCTTCAAGCAGCATATGCAGCTGCTTTTAAGAATGTAAGGCCTAGCGCAGAGAATCTTCCCGAGGAACTGGCTATCATTCTAACATCATGCTGGCAAGAGGATGCAAATGCTCGTCCAAATTTCTCCCAAATTATCCAAATGTTACTTAATTACCTTTATACTATTTCACCCCCTGAACCGGTGATTCCGTCCCGAATTTTCACTTCTGAGAACACGGTTTTTCCTCCTGAATCTCCTGGAACAAGCTCGCTGATGGCAGTCCGTGACGATTCAGGGGACACTCCAAAAGCTAAAATGGAAAATAATCCCAGAGGTGGTTTTAGTTATGTAGTAACACAGCCTAAGCCTTACATCATCATGGTAGAATGGAAGATCATCCTGATGCTTGGTTGTAAGATCTTGAAGATTCAACTTCAAAACATTGCTACCAGTTAA 1152 43.4 MEAGSRFYSATDEFRLEAKWLVDPKHLFVGPRIGEGAHAKVYEGKYKNQTVAIKIVHKGETVDEVAKKEARFAREVAMLSRVQHKNLVKFIGACKEPVMVIVTELLLGGTLRKYLLNMRPRCLDTRLAVGFALDIARAMECLHSHGIIHRDLKPENLLLTADHKTVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVLWELLHNKLPFEGMSNLQAAYAAAFKNVRPSAENLPEELAIILTSCWQEDANARPNFSQIIQMLLNYLYTISPPEPVIPSRIFTSENTVFPPESPGTSSLMAVRDDSGDTPKAKMENNPRGGFSYVVTQPKPYIIMVEWKIILMLGCKILKIQLQNIATS* 384
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29333915 29336643 - Chy2G048850.1 Chy02g02618 222066
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02618 383 CDD STKc_MAP3K-like 33 287 - -
Chy02g02618 383 SMART serkin_6 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02618 383 SUPERFAMILY Protein kinase-like (PK-like) 19 316 IPR011009 -
Chy02g02618 383 MobiDBLite consensus disorder prediction 315 339 - -
Chy02g02618 383 PANTHER SERINE-THREONINE PROTEIN KINASE 1 329 - -
Chy02g02618 383 ProSiteProfiles Protein kinase domain profile. 27 291 IPR000719 GO:0004672|GO:0005524|GO:0006468
Chy02g02618 383 Gene3D Transferase(Phosphotransferase) domain 1 108 295 - -
Chy02g02618 383 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672|GO:0006468
Chy02g02618 383 ProSitePatterns Protein kinases ATP-binding region signature. 33 54 IPR017441 GO:0005524
Chy02g02618 383 PRINTS Tyrosine kinase catalytic domain signature 215 237 IPR001245 GO:0004672|GO:0006468
Chy02g02618 383 PRINTS Tyrosine kinase catalytic domain signature 258 280 IPR001245 GO:0004672|GO:0006468
Chy02g02618 383 PRINTS Tyrosine kinase catalytic domain signature 103 116 IPR001245 GO:0004672|GO:0006468
Chy02g02618 383 PRINTS Tyrosine kinase catalytic domain signature 141 159 IPR001245 GO:0004672|GO:0006468
Chy02g02618 383 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 329 - -
Chy02g02618 383 Pfam Protein tyrosine and serine/threonine kinase 31 287 IPR001245 GO:0004672|GO:0006468
Chy02g02618 383 Gene3D Phosphorylase Kinase; domain 1 15 106 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02618 Chy-Chr2:29333915 Chy05g00823 Chy-Chr5:11816512 3.51E-76 dispersed
Chy02g00667 Chy-Chr2:4044918 Chy02g02618 Chy-Chr2:29333915 1.05E-99 transposed
Chy04g02309 Chy-Chr4:27546469 Chy02g02618 Chy-Chr2:29333915 7.09E-154 transposed
Chy02g02618 Chy-Chr2:29333915 Chy04g01420 Chy-Chr4:20838762 0 wgd
Chy02g02618 Chy-Chr2:29333915 Chy09g00366 Chy-Chr9:3200310 0 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71106 PF07714 PK_Tyr_Ser-Thr 1.50E-57 CL0016 Chy PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02618 - - csv:101223021 689.108