Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02640 ATGGGGAAGAAGACGAAGAAACCCGGAAAAGGAAAAGAGAAGACTGAGAAAAAAACAGCCAAAGCCGAGGAAAAGAGAGCTCGAAGGGAGAGTAAGAAGCTCTCTCCCGAGGATGACATTGATGCAATCCTCTTGAGTATACAAAAGGAGGAAGCGAAGAAAAAGGAAGTTCACGTTGAGGAGAATGTCCCTGCGCCATCTCCTCGGTCCAATTGTTCGTTGACTATCAATCCCTTAAAAGAAACAGAGTTGATCCTTTATGGGGGTGAATTCTACAATGGTACTAAGACATATGTCTATGGTGATCTGTATCGGTACGATGTTGAGAAACTAGAGTGGAAAGTAATTTCAAGTCCCAATAGCCCGCCTCCTCGTAGTGCTCATCAGGCTGTTGCTTGGAAGAATTATCTCTATATTTTTGGTGGAGAGTTTACATCTCCTAACCAAGAGAGGTTTCATCACTACAAGGATTTCTGGGTGCTGGACCTGAAAACAAATCAATGGGAACAATTAAATTTAAAAGGTTGTCCCAGTCCACGCTCTGGTCATCGGATGGTCTTATACAAGCACAAAATTATTGTTTTTGGTGGTTTCTATGACACTTTAAGAGAAGTGAGATACTATAACGATATGTATGTATTTGATCTGGACCAGTACAAGTGGCAAGAAGTAAAGCCCAGCCCTGGTGCAATGTGGCCTAGTCCTCGAAGTGGTTTTCAATTTTTTGTTCACCAAGATGAGGTTTTCTTGTATGGTGGGTATTTTAAAGAAATTCAATCTGATAAGGGCACTTCTGAAAGAGGAGTAGTGCATGCAGACATGTGGTCCCTTGATCCAAGGACTTGGCAATGGAATAAGGTAAAAAAAGGTGGGATGCCACCTGGGCCTCGTGCAGGGTTCTCCATGTGTGTTCATAAGAGGCGGGCCTTGCTATTTGGGGGAGTGGTGGACATGGAAGTTGAAGGCGGTGATGCAATGATGAGTCTATTCTTGAATGAACTCTATGCATTTCAAATAGACAACCATCGATGGTATCCTCTAGAGTTACGGAAGGAGAAGTCGATAAAGGCAAAGATTAAAAAAAATTCTGACCAAAAGGACAATGAGGTTGCGTTTGATGATAATATAAATGAGGAGGTTGTTGACGTTGGCAAAACTGAAACACCATTCATGGATGAATCATGCAGCATGGAAACTGACATTGATGAAATATCTCATCACATATCTTCATCTGTGTCCATTAACAATGGTGGATTGGAAATAAGTTCTGGCAAAAAACAAGAATCTAGTTCAAACAAAAATGCTGTTTTGCCCGAGGTGATTAAGCCCTGTGGACGTATTAACTCCTGCGTGGTTGTTGGAAGAGATACATTGTACATATATGGGGGTATGATGGAGATTAAAGATCAAGAAATCACCCTTGATGACTTGTATGCTCTCAATCTCAGTAAACTTGATGAATGGAAGTGCATTATACCGGCCACGGAATCTGAATGGGTAGAAGCCTCAGAGGATGAAGATGAGGAAGATGATGAAGATGAGAGTGAGAATGATGATAATTCTGAAGGAAGCAATGAAAGTGATGGGGATAGTGATGAGGAGGATTTTGAGGCTGGCAATGATGGGTCGCGAAAAGTAGGAGATGCTGTAGCTTTAATCAAGGGTGAGGGCAGGAATCTTCGTAGGAAGGAGAAGCGGGCAAGGATTGAACAAATCAGAGCTAACCTTGGGCTTTCAGATTCACAAAGAACTCCTATGCCTGCAGAATCTCTAAGGGAGTTCTATAAACGTACAAATCTGTACTGGCAAATGGCGGCACATGAGCATACGCAACATACTGGAAAGGAACTTCGGAAAGATGGTTTCGATCTTGCCGAATCTCGTTACAGGGAGCTTAAACCCATCCTTGATGAGCTTGCCATATTGGAGGCAGAGCAGAAAGCAGAAGAGGCAGAAGCTCCTGAAACCAGTGATTGGAGAGGCAAAAGTTGGTATAATTCGCGGCTAGAATTCGAATCTCCAAAACCCCAATCGGGCCACAGTGACAGGTTTCGAAGCTTGGAAATCAGCAGTGCAATGAAGAAGAAAGTAACAGCAAGCACCATAATTCTCCTTTCACTTTTACTTTCTCTTCAAGAAGTCGTTCATTTTGCTTTCTCTTTACCTCCTTCACACAACAATCAGGACGAGGAGCAATCTGCGACTTTGAGACCTCTTGAGCAAAACGAAGAGCATGTTGATGAGGTTCATTGTTCCAGAGAAAGAAGCAGGACAGCCTGGAATATTATTGAGGAGCATTTACTGCCGTTTATGGAGAAAGAAAATTATGAGGTTTCCACCCAGTGTAGGCTTCATCCGAACAATGATCTCTTCAGAGATCAGGAACAGCACAAGATTCATCTTGATATAAATCATTGGCAGTGTGGATACTGTCGTAAAAGCTTTCGTGCTGAAAAATTTCTCGATAAGCATTTTGACCACAGACACAGCAATCTTCTGAATGTTAGTCACAGGAAGTGCTTGGCTGATTTATGTGGGGCATTACATTGTGACCTAAAGATGGATATCAAGTCTCGTAAATCTAAATGCAAGCCTGCAGCTGCTGCTAGGAACAAGCATTTATGTGAGAGTCTTGCTGATAGCTGTTTTCCAATTAATGAGGGACCATCAGCAAACCGTCTTCATGAGTTGTTTCTTCACCAATTCTGTGGAGCTCATTCTTGCACTGGAAAACAAAAGCCATTTTCTAGAGGAGCAGCGAGGCAACCAGGCATATTTTACATGGCATCTTCAATATTGATTTTGATGCTGCTACCAATTTTCTATGTCATTGTCTATTTACACCGCAGAGAATCAAGAAATGGAATCGAAGTGCTGAGACGAATCTCAAAAGCTGGACGTAAAAGCAAACCCTTGTAA 2919 42.27 MGKKTKKPGKGKEKTEKKTAKAEEKRARRESKKLSPEDDIDAILLSIQKEEAKKKEVHVEENVPAPSPRSNCSLTINPLKETELILYGGEFYNGTKTYVYGDLYRYDVEKLEWKVISSPNSPPPRSAHQAVAWKNYLYIFGGEFTSPNQERFHHYKDFWVLDLKTNQWEQLNLKGCPSPRSGHRMVLYKHKIIVFGGFYDTLREVRYYNDMYVFDLDQYKWQEVKPSPGAMWPSPRSGFQFFVHQDEVFLYGGYFKEIQSDKGTSERGVVHADMWSLDPRTWQWNKVKKGGMPPGPRAGFSMCVHKRRALLFGGVVDMEVEGGDAMMSLFLNELYAFQIDNHRWYPLELRKEKSIKAKIKKNSDQKDNEVAFDDNINEEVVDVGKTETPFMDESCSMETDIDEISHHISSSVSINNGGLEISSGKKQESSSNKNAVLPEVIKPCGRINSCVVVGRDTLYIYGGMMEIKDQEITLDDLYALNLSKLDEWKCIIPATESEWVEASEDEDEEDDEDESENDDNSEGSNESDGDSDEEDFEAGNDGSRKVGDAVALIKGEGRNLRRKEKRARIEQIRANLGLSDSQRTPMPAESLREFYKRTNLYWQMAAHEHTQHTGKELRKDGFDLAESRYRELKPILDELAILEAEQKAEEAEAPETSDWRGKSWYNSRLEFESPKPQSGHSDRFRSLEISSAMKKKVTASTIILLSLLLSLQEVVHFAFSLPPSHNNQDEEQSATLRPLEQNEEHVDEVHCSRERSRTAWNIIEEHLLPFMEKENYEVSTQCRLHPNNDLFRDQEQHKIHLDINHWQCGYCRKSFRAEKFLDKHFDHRHSNLLNVSHRKCLADLCGALHCDLKMDIKSRKSKCKPAAAARNKHLCESLADSCFPINEGPSANRLHELFLHQFCGAHSCTGKQKPFSRGAARQPGIFYMASSILILMLLPIFYVIVYLHRRESRNGIEVLRRISKAGRKSKPL* 973
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29445162 29458453 - Chy2G049070.1 Chy02g02640 222088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02640 972 MobiDBLite consensus disorder prediction 1 37 - -
Chy02g02640 972 Coils Coil 12 32 - -
Chy02g02640 972 ProSitePatterns Zinc finger C2H2 type domain signature. 808 829 IPR013087 -
Chy02g02640 972 PANTHER KELCH DOMAIN-CONTAINING PROTEIN 1 657 - -
Chy02g02640 972 Pfam Galactose oxidase, central domain 135 187 - -
Chy02g02640 972 Pfam Galactose oxidase, central domain 191 239 - -
Chy02g02640 972 SUPERFAMILY Kelch motif 82 490 IPR015915 GO:0005515
Chy02g02640 972 MobiDBLite consensus disorder prediction 496 549 - -
Chy02g02640 972 MobiDBLite consensus disorder prediction 499 537 - -
Chy02g02640 972 Gene3D - 45 370 IPR015915 GO:0005515
Chy02g02640 972 Pfam Domain of unknown function (DUF4110) 577 657 IPR025183 -
Chy02g02640 972 Pfam Galactose oxidase, central domain 449 491 - -
Chy02g02640 972 Pfam Galactose oxidase, central domain 68 122 - -
Chy02g02640 972 MobiDBLite consensus disorder prediction 12 37 - -
Chy02g02640 972 ProSiteProfiles Zinc finger C2H2 type domain profile. 806 831 IPR013087 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02640 Chy-Chr2:29445162 Chy02g02432 Chy-Chr2:27990624 1.46E-17 dispersed
Chy06g00669 Chy-Chr6:4586155 Chy02g02640 Chy-Chr2:29445162 1.34E-06 transposed
Chy02g02640 Chy-Chr2:29445162 Chy06g01499 Chy-Chr6:16406976 3.81E-99 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02640 - - csv:101218127 1150.58