Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02666 ATGTTCTGGTCCTTTCAACGCCAAGAAATCGAACAGGTTAACGATTTTAAAAACCACCAGCTTCCTCTTGCCCGCATTAAGAAGATCATGAAAGCCGATGAGGACGTTCGTATGATCTCTGCCGAGGCCCCCATTTTGTTCGCTAAGGCTTGTGAGCTTTTTATTCTTGAACTCACTATTAGGTCATGGCTCCACGCTGAAGAGAATAAGAGGCGGACATTGCAGAAGAATGATATTGCTGCTGCTATCACGAGGACCGATATCTTTGATTTCTTAGTTGATATTGTTCCTAGGGATGAGATCAAGGACGAGGCTGGGTTGGGCGGTATGGTTGGAGCTACTGCTAGTGGAGTTCCGTACTATTATCCGCCTATGGGTCAACCGGCGGGGGCTCCCGGGGGAATGATGATTGGGAGACCGGCAATGGATCCCACCGGAGTTTACGCTCAGCCGCCATCCCAGGCGTGGCAATCCGTGTGGCAGACCGCTGCTGAGGATGGTTCTTACGCGAGTGGGGCCAGCAGTGGGCAGGGTAATCTTGATGGTCAGAGCTAA 555 51.17 MFWSFQRQEIEQVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGATASGVPYYYPPMGQPAGAPGGMMIGRPAMDPTGVYAQPPSQAWQSVWQTAAEDGSYASGASSGQGNLDGQS* 185
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29657404 29661824 - Chy2G049330.1 Chy02g02666 222114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02666 184 Gene3D Histone, subunit A 1 98 IPR009072 GO:0046982
Chy02g02666 184 PANTHER NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT C-4 1 184 - -
Chy02g02666 184 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 20 83 IPR003958 -
Chy02g02666 184 SUPERFAMILY Histone-fold 7 92 IPR009072 GO:0046982
Chy02g02666 184 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 1 184 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02666 Chy-Chr2:29657404 Chy08g01003 Chy-Chr8:17300087 1.30E-70 dispersed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17628 PF00808 CBFD_NFYB_HMF 1.50E-17 CL0012 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02666 - - csv:101213576 329.331