Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Chy02g02705 | ATGGCCTCCTCCGAGGTTTCGATCAACCCCAATTCCGCCTCCTTCAACGACCATGCCGATTCTACCAAAGACACCTCCGATCCACCCAACGCTCTCTCTCCCAGGGATGCTGATATCGCTCTCTACACCGAGCTCTGGAATGCTTGTGCTGGTCCTCTCGTTTCTGTTCCTCGTGAAAACGAGCGCGTCTTCTACTTCCCTCAGGGCCATATCGAACAGGTGGAAGCATCAACTAGTCAAGTGGCGGACCAACAGATGCCTGTTTATAACCTTCCATCGAAGATCCTCTGCCGCGTTATTAATGTGCACTTAAAGGCCGAGCCAGACACCGATGAGGTATTTGCACAGATCACTTTGCTTCCAGAGGCTAATCAAGATGAGCATGCTGTAGACAAGGAACCTCCACCTCCTCCCCCGAGGAGATTTCACGTGCATTCTTTTTGCAAGACTCTGACTGCTTCTGACACTAGTACTCATGGGGGGTTTTCAGTCTTGAGACGCCATGCTGATGAATGTCTTCCACCACTGGACATGTCACGACAGCCTCCTACCCAGGAGTTGGTTGCAAAGGATTTGCATGGTAATGAATGGCGTTTCCGTCATATATTTCGAGGGCAACCACGAAGGCATTTGCTTCAGAGTGGTTGGAGTGTCTTTGTGAGCTCAAAAAGACTGGTTGCAGGAGATGCTTTTATATTTTTGAGGGGTGAGAATGGAGAGCTGCGTGTTGGCGTGAGGCGTGCAATGAGACAACATGGCAATGTTCCATCATCGGTTATATCTAGCCATAGCATGCATCTTGGTGTGCTTGCGACTGCTTGGCATGCTATTTCGACAGGCACAATGTTCACTGTCTACTATAAGCCTAGGACAAGCCCTTCTGAATTCATTGTTCCATATGACCAGTATATGGAGTCTATCAAGAAGAGCTACACCATAGGAATGCGGTTTAAAATGAGATTTGAAGGTGAAGAGGCTCCTGAGCAGAGGTTCACTGGTACTATCATTGGATGTGAAGATGCTGATCCCAAAAGGTGGAAAGATTCCAAGTGGAGATGCCTGAAGGTGAGATGGGATGAGACTTCTACTATTTCTCGTCCAGAGAAAGTCTCACCGTGGAAAATTGAGCCGGCCCTTGCTCCTCCTGCACTGAATCCCCTTCCTATGACTAGACCTAAAAGGCCTCGATCAAACATGGTATCTACATCCCCTGATTCCTCTGTTCTTACACGAGAAGGCTCATCAAGAGTGACTGTAGACCCTTCACCAGCCAGTGCGTTTACAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTATCGATGGCAGTGATCCAGATGCGGCTGAAAAATCTGTTATGTGGCCTCCTTCATTAGACGATGAGAAAGTTGATGTGGTTTCTACATCTAAGAAACACGGAGCAGATAGCTGGATACCTCCAGGAAGGAGCGAGCCAACCTACGCAGATCTACTGTCAGGTTTTGGAACTGATATGGATTCTTCTCATAGTGTTCGTGCTGCCATGGGAGATTCTGCATTAGTAACTGCTAATTCAATCAGAAAGCATGCCATGGAACACGATGGAAAATTTAGCTTCCTTGGTGGTAGCTCATGGTCTGTCTTGCCTTCTGGTCTCTCGCTCAACCTGGTTGACTCCAGTCAGAAGGGTCATATTCGGGCTGGTGACTTATCTTATCAAGTGAGAGGAAATGCTACCTTCAATGGATTTGGCGATCATTCCATATCCCATTGTCATAGAACTGAACAGCCTCATGGAAATTGGCTGATGCCTCCACCTTCATCTCATTTTGACTATCCAATTCATTCAAGTGAACTGATGTCAAAACCTATGTTATTTCAGAAACAAGATATACTAAAACCCAAAGATGGGAATTGTAAGCTTTTCGGTATTTCCCTCGTCAAAAATCCTGCCATTCCAGACCCTGTAGGATTGAACAGAAACATGATGAACGAGGCGGATGTGATGCATCCCAATGTACATCAAATCCATTCAAGCGAGTCTGGCCTGAAGTCTGAACTACCTAGGCTTTTAAAGTTGGATAAGTCAGTTGCCATCAGTGAGGCCGATAAATTGCAGCAAACATGCAAATCACAGTGTACTTCAGCAAGGAGTTGTACAAAGGTCCACAAGCAGGGGATTGCACTTGGAAGGTCAGTTGATCTTAGCAGGTTCAACAATTACGATGAATTGGTTGCTGAATTGGACCAACTGTTTGAATTTGGTGGTGAGCTGCTGGCTCCCAAAAAGAATTGGCTTATTGTATATACGGATGATGAAGGTGACATGATGCTTGTTGGAGACGATCCCTGGCGGGAGTTTTGTGGTATGGTTCGGAAGATTTTTATCTATACAAGAGAAGAAGTCCAGAAGATGAATCCAGGATCCCTAAATTTGAAAGGCGAAGAAAATCCATCAGTTGAAGGGGAAGAGGTAAAAGAGACCAAAAGTCAGGCAGTTCCTTCGATGTCAGCACCGGAGAGTTCTTAG | 2520 | 46.19 | MASSEVSINPNSASFNDHADSTKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVDPSPASAFTRVLQGQEFSTLRGNFIDGSDPDAAEKSVMWPPSLDDEKVDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGTDMDSSHSVRAAMGDSALVTANSIRKHAMEHDGKFSFLGGSSWSVLPSGLSLNLVDSSQKGHIRAGDLSYQVRGNATFNGFGDHSISHCHRTEQPHGNWLMPPPSSHFDYPIHSSELMSKPMLFQKQDILKPKDGNCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHPNVHQIHSSESGLKSELPRLLKLDKSVAISEADKLQQTCKSQCTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNPGSLNLKGEENPSVEGEEVKETKSQAVPSMSAPESS* | 840 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 29881835 | 29885948 | - | Chy2G049720.1 | Chy02g02705 | 222153 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Chy02g02705 | 839 | Gene3D | - | 709 | 803 | - | - | |
Chy02g02705 | 839 | SUPERFAMILY | DNA-binding pseudobarrel domain | 144 | 276 | IPR015300 | - | |
Chy02g02705 | 839 | PANTHER | AUXIN RESPONSE FACTOR 4-RELATED | 30 | 821 | IPR044835 | GO:0003677|GO:0006355|GO:0009725 | |
Chy02g02705 | 839 | MobiDBLite | consensus disorder prediction | 381 | 421 | - | - | |
Chy02g02705 | 839 | SUPERFAMILY | CAD & PB1 domains | 713 | 791 | - | - | |
Chy02g02705 | 839 | ProSiteProfiles | B3 DNA-binding domain profile. | 147 | 249 | IPR003340 | GO:0003677 | |
Chy02g02705 | 839 | Pfam | AUX/IAA family | 759 | 799 | IPR033389 | - | |
Chy02g02705 | 839 | ProSiteProfiles | PB1 domain profile. | 714 | 798 | IPR000270 | GO:0005515 | |
Chy02g02705 | 839 | SMART | B3_2 | 147 | 249 | IPR003340 | GO:0003677 | |
Chy02g02705 | 839 | Pfam | B3 DNA binding domain | 147 | 248 | IPR003340 | GO:0003677 | |
Chy02g02705 | 839 | Gene3D | - | 310 | 380 | - | - | |
Chy02g02705 | 839 | PANTHER | AUXIN RESPONSE FACTOR 2 | 30 | 821 | - | - | |
Chy02g02705 | 839 | MobiDBLite | consensus disorder prediction | 803 | 839 | - | - | |
Chy02g02705 | 839 | CDD | B3_DNA | 145 | 247 | IPR003340 | GO:0003677 | |
Chy02g02705 | 839 | Gene3D | - | 144 | 249 | IPR015300 | - | |
Chy02g02705 | 839 | MobiDBLite | consensus disorder prediction | 395 | 421 | - | - | |
Chy02g02705 | 839 | Pfam | Auxin response factor | 273 | 355 | IPR010525 | GO:0003677|GO:0005634|GO:0006355|GO:0009725 | |
Chy02g02705 | 839 | MobiDBLite | consensus disorder prediction | 1 | 34 | - | - | |
Chy02g02705 | 839 | MobiDBLite | consensus disorder prediction | 1 | 29 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Chy02g02705 | Chy-Chr2:29881835 | Chy07g01133 | Chy-Chr7:16265895 | 6.87E-28 | dispersed | |
Chy03g00953 | Chy-Chr3:13093973 | Chy02g02705 | Chy-Chr2:29881835 | 1.07E-77 | dispersed | |
Chy09g01305 | Chy-Chr9:15000111 | Chy02g02705 | Chy-Chr2:29881835 | 3.71E-28 | dispersed | |
Chy11g00813 | Chy-Chr11:11664482 | Chy02g02705 | Chy-Chr2:29881835 | 1.34E-74 | dispersed | |
Chy02g02705 | Chy-Chr2:29881835 | Chy11g01328 | Chy-Chr11:19476458 | 5.75E-29 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
17632 | PF02362 | B3 | 3.30E-21 | CL0405 | Chy | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Chy02g02705 | - | - | csv:101206845 | 1683.31 |