Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02705 ATGGCCTCCTCCGAGGTTTCGATCAACCCCAATTCCGCCTCCTTCAACGACCATGCCGATTCTACCAAAGACACCTCCGATCCACCCAACGCTCTCTCTCCCAGGGATGCTGATATCGCTCTCTACACCGAGCTCTGGAATGCTTGTGCTGGTCCTCTCGTTTCTGTTCCTCGTGAAAACGAGCGCGTCTTCTACTTCCCTCAGGGCCATATCGAACAGGTGGAAGCATCAACTAGTCAAGTGGCGGACCAACAGATGCCTGTTTATAACCTTCCATCGAAGATCCTCTGCCGCGTTATTAATGTGCACTTAAAGGCCGAGCCAGACACCGATGAGGTATTTGCACAGATCACTTTGCTTCCAGAGGCTAATCAAGATGAGCATGCTGTAGACAAGGAACCTCCACCTCCTCCCCCGAGGAGATTTCACGTGCATTCTTTTTGCAAGACTCTGACTGCTTCTGACACTAGTACTCATGGGGGGTTTTCAGTCTTGAGACGCCATGCTGATGAATGTCTTCCACCACTGGACATGTCACGACAGCCTCCTACCCAGGAGTTGGTTGCAAAGGATTTGCATGGTAATGAATGGCGTTTCCGTCATATATTTCGAGGGCAACCACGAAGGCATTTGCTTCAGAGTGGTTGGAGTGTCTTTGTGAGCTCAAAAAGACTGGTTGCAGGAGATGCTTTTATATTTTTGAGGGGTGAGAATGGAGAGCTGCGTGTTGGCGTGAGGCGTGCAATGAGACAACATGGCAATGTTCCATCATCGGTTATATCTAGCCATAGCATGCATCTTGGTGTGCTTGCGACTGCTTGGCATGCTATTTCGACAGGCACAATGTTCACTGTCTACTATAAGCCTAGGACAAGCCCTTCTGAATTCATTGTTCCATATGACCAGTATATGGAGTCTATCAAGAAGAGCTACACCATAGGAATGCGGTTTAAAATGAGATTTGAAGGTGAAGAGGCTCCTGAGCAGAGGTTCACTGGTACTATCATTGGATGTGAAGATGCTGATCCCAAAAGGTGGAAAGATTCCAAGTGGAGATGCCTGAAGGTGAGATGGGATGAGACTTCTACTATTTCTCGTCCAGAGAAAGTCTCACCGTGGAAAATTGAGCCGGCCCTTGCTCCTCCTGCACTGAATCCCCTTCCTATGACTAGACCTAAAAGGCCTCGATCAAACATGGTATCTACATCCCCTGATTCCTCTGTTCTTACACGAGAAGGCTCATCAAGAGTGACTGTAGACCCTTCACCAGCCAGTGCGTTTACAAGGGTCTTGCAAGGTCAAGAATTCTCGACCTTGAGAGGCAATTTTATCGATGGCAGTGATCCAGATGCGGCTGAAAAATCTGTTATGTGGCCTCCTTCATTAGACGATGAGAAAGTTGATGTGGTTTCTACATCTAAGAAACACGGAGCAGATAGCTGGATACCTCCAGGAAGGAGCGAGCCAACCTACGCAGATCTACTGTCAGGTTTTGGAACTGATATGGATTCTTCTCATAGTGTTCGTGCTGCCATGGGAGATTCTGCATTAGTAACTGCTAATTCAATCAGAAAGCATGCCATGGAACACGATGGAAAATTTAGCTTCCTTGGTGGTAGCTCATGGTCTGTCTTGCCTTCTGGTCTCTCGCTCAACCTGGTTGACTCCAGTCAGAAGGGTCATATTCGGGCTGGTGACTTATCTTATCAAGTGAGAGGAAATGCTACCTTCAATGGATTTGGCGATCATTCCATATCCCATTGTCATAGAACTGAACAGCCTCATGGAAATTGGCTGATGCCTCCACCTTCATCTCATTTTGACTATCCAATTCATTCAAGTGAACTGATGTCAAAACCTATGTTATTTCAGAAACAAGATATACTAAAACCCAAAGATGGGAATTGTAAGCTTTTCGGTATTTCCCTCGTCAAAAATCCTGCCATTCCAGACCCTGTAGGATTGAACAGAAACATGATGAACGAGGCGGATGTGATGCATCCCAATGTACATCAAATCCATTCAAGCGAGTCTGGCCTGAAGTCTGAACTACCTAGGCTTTTAAAGTTGGATAAGTCAGTTGCCATCAGTGAGGCCGATAAATTGCAGCAAACATGCAAATCACAGTGTACTTCAGCAAGGAGTTGTACAAAGGTCCACAAGCAGGGGATTGCACTTGGAAGGTCAGTTGATCTTAGCAGGTTCAACAATTACGATGAATTGGTTGCTGAATTGGACCAACTGTTTGAATTTGGTGGTGAGCTGCTGGCTCCCAAAAAGAATTGGCTTATTGTATATACGGATGATGAAGGTGACATGATGCTTGTTGGAGACGATCCCTGGCGGGAGTTTTGTGGTATGGTTCGGAAGATTTTTATCTATACAAGAGAAGAAGTCCAGAAGATGAATCCAGGATCCCTAAATTTGAAAGGCGAAGAAAATCCATCAGTTGAAGGGGAAGAGGTAAAAGAGACCAAAAGTCAGGCAGTTCCTTCGATGTCAGCACCGGAGAGTTCTTAG 2520 46.19 MASSEVSINPNSASFNDHADSTKDTSDPPNALSPRDADIALYTELWNACAGPLVSVPRENERVFYFPQGHIEQVEASTSQVADQQMPVYNLPSKILCRVINVHLKAEPDTDEVFAQITLLPEANQDEHAVDKEPPPPPPRRFHVHSFCKTLTASDTSTHGGFSVLRRHADECLPPLDMSRQPPTQELVAKDLHGNEWRFRHIFRGQPRRHLLQSGWSVFVSSKRLVAGDAFIFLRGENGELRVGVRRAMRQHGNVPSSVISSHSMHLGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPYDQYMESIKKSYTIGMRFKMRFEGEEAPEQRFTGTIIGCEDADPKRWKDSKWRCLKVRWDETSTISRPEKVSPWKIEPALAPPALNPLPMTRPKRPRSNMVSTSPDSSVLTREGSSRVTVDPSPASAFTRVLQGQEFSTLRGNFIDGSDPDAAEKSVMWPPSLDDEKVDVVSTSKKHGADSWIPPGRSEPTYADLLSGFGTDMDSSHSVRAAMGDSALVTANSIRKHAMEHDGKFSFLGGSSWSVLPSGLSLNLVDSSQKGHIRAGDLSYQVRGNATFNGFGDHSISHCHRTEQPHGNWLMPPPSSHFDYPIHSSELMSKPMLFQKQDILKPKDGNCKLFGISLVKNPAIPDPVGLNRNMMNEADVMHPNVHQIHSSESGLKSELPRLLKLDKSVAISEADKLQQTCKSQCTSARSCTKVHKQGIALGRSVDLSRFNNYDELVAELDQLFEFGGELLAPKKNWLIVYTDDEGDMMLVGDDPWREFCGMVRKIFIYTREEVQKMNPGSLNLKGEENPSVEGEEVKETKSQAVPSMSAPESS* 840
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 29881835 29885948 - Chy2G049720.1 Chy02g02705 222153
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02705 839 Gene3D - 709 803 - -
Chy02g02705 839 SUPERFAMILY DNA-binding pseudobarrel domain 144 276 IPR015300 -
Chy02g02705 839 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 30 821 IPR044835 GO:0003677|GO:0006355|GO:0009725
Chy02g02705 839 MobiDBLite consensus disorder prediction 381 421 - -
Chy02g02705 839 SUPERFAMILY CAD & PB1 domains 713 791 - -
Chy02g02705 839 ProSiteProfiles B3 DNA-binding domain profile. 147 249 IPR003340 GO:0003677
Chy02g02705 839 Pfam AUX/IAA family 759 799 IPR033389 -
Chy02g02705 839 ProSiteProfiles PB1 domain profile. 714 798 IPR000270 GO:0005515
Chy02g02705 839 SMART B3_2 147 249 IPR003340 GO:0003677
Chy02g02705 839 Pfam B3 DNA binding domain 147 248 IPR003340 GO:0003677
Chy02g02705 839 Gene3D - 310 380 - -
Chy02g02705 839 PANTHER AUXIN RESPONSE FACTOR 2 30 821 - -
Chy02g02705 839 MobiDBLite consensus disorder prediction 803 839 - -
Chy02g02705 839 CDD B3_DNA 145 247 IPR003340 GO:0003677
Chy02g02705 839 Gene3D - 144 249 IPR015300 -
Chy02g02705 839 MobiDBLite consensus disorder prediction 395 421 - -
Chy02g02705 839 Pfam Auxin response factor 273 355 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Chy02g02705 839 MobiDBLite consensus disorder prediction 1 34 - -
Chy02g02705 839 MobiDBLite consensus disorder prediction 1 29 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02705 Chy-Chr2:29881835 Chy07g01133 Chy-Chr7:16265895 6.87E-28 dispersed
Chy03g00953 Chy-Chr3:13093973 Chy02g02705 Chy-Chr2:29881835 1.07E-77 dispersed
Chy09g01305 Chy-Chr9:15000111 Chy02g02705 Chy-Chr2:29881835 3.71E-28 dispersed
Chy11g00813 Chy-Chr11:11664482 Chy02g02705 Chy-Chr2:29881835 1.34E-74 dispersed
Chy02g02705 Chy-Chr2:29881835 Chy11g01328 Chy-Chr11:19476458 5.75E-29 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17632 PF02362 B3 3.30E-21 CL0405 Chy TF
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02705 - - csv:101206845 1683.31