Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Chy02g02707 ATGACCCAGCCGGTGAAGAAACCCGAAGTGGAGGAACTTTGCTTTGCCCACTCGCCTGACATCATTACGGAAGACCTAACTCCAGATGAATGCAATAGCACCGTCGAAGACCAAGAGGCCACACTCATTGCTCTAGTCGAGCATCGTACTCGTGAAGTCCACCATCTCCAGCAGCGTATTTCCTACTACACTCGTCAGCTAGAGGAAGCAGAGAAGCGGTTACAGGAATCTGAATCTTTGTTGGCCCGCTCTCAAGGTCCGCGTTATACACTGCCATCAAGAAGTTCTCAGGATTGTGGATTCGAATGTGTGGAGGCTGAGCCTAGATCAACCTCTCCTATTCATGGCAATGGCGGTTTGGAAGCAAAACCACTTCTTGGTTCCAGTCACAACCCTTCAATTCCCAATCGCTCTAATCTTGCCACAACAGGTGAACAAGAAAAACCTTGTATGGTCACTATTGGGAGAGTTGATGATCAGAGTGATAGGAAAAGAAGAAAGTTTGGTCCTCCCATGTTTGCACTCATGATGCCTGCATTGTGTATCTCAGAACAAAAAGATCACAAGGAACTGATTTCATTAGTACGCAGTAGCTCTTCCTCATTGACTGCCCAACCGGATGCTAGTTATTATTTAACTAGTCAGCACAAGAGAAAACTGAGAAGCCTTGCTCCAGGTCCAGTCAATGACCAACTTTTTGTTACTAGATACAAAGCCCACATTGGAATTGAAGGTCTTTTGCTTCTCTTCTTTGTGCTACAAACTGTATGTCTCAAAAGCAGAGGAGATGACCTGAAGAAGGCCAGTGTTACTTTCTTAGAGGATAAGCCTCATGTTAAAGGCATTATCAATGACATTAGTTTCTTGCCTTGGGATTCTGTTCCGTTCATTACCGGTGGCAGTGATCATGCTGTCGTTTTATGGAATATGAGAGATAAATATAACACGTGGAAACCAGAGCTGTTGCACAGGAATCTGCACTCTTCCGCTGTCTTGGGTGTCTCTGGGATGCAGATGAAGCAAATCGTACTTTCTGCAGGTTCAGACAAGAGACTCCTTGGTTTTGATGTTCAAGTAGGAAGCACAGTCTTCAAGCATCAACTAGAGAGTAAATGTATGAGTGTGTTGCCTAATCCATGTGACTTTAACCTGTTCATGGTCCAAACAGGGAGTCCAGAAAATCAACTTAGATTATTTGACATTAGATTGGAACAGAAAGAAGTCCACCGTTTTGGGTGGAAGCAAGAAAACAGTGAATCTCAATCAGCTTTGATAAAGCAGTCATGGTCACCAAATGGATTACACTTAACGTATAATTCTCACATGCCATCTCAATCACTTAAAGCTCATCAGAAGCGCGTCTTCAAAGCTGTTTGGCTCCGTTCTCTTCCTTTTCTTGTTTCCATTTCATCTGATTTAAACATTGGACTGCACAAAATGGTTGGTAAGGGAAAAGGGACACCCCGGAGAAGGTATATCAAGGAAAGGGAAAAATTAAAAGTGGATCCGAAGCGAGGGAAGAGGGCACTTTGTTCCGATGAATCGGAGGAAGAAAATCCGTTCCCGATCTACTCAGCTAGATCTGAGCATGACACGTCGGCCATGGTATCTGCGTTAACTCAAGTGATAACGAGTGGGAGTGGGAGTGGGAGTAGCAGAAGCCTATCAGTAGTAGAAGAACCTGCAGCATCAGCGCGGGGAGATAATGAAGAAGGAGTGAAAAGGGAAAGCCGACATTATCGAGGAGTAAGGCAGAGACCGTGGGGAAAATGGGCTGCTGAGATTCGTGATCCAAAAAAGGCAGCAAGAGTGTGGTTGGGCACCTTTGACACTGCCGAGGCTGCGGCACTTGCTTACGATGAAGCTGCCCTCAGATTTAAGGGCACAAAAGCCAAGCTTAACTTCCCTGAGAGACTTACCACCCCACCATCATACCCCTATGCCCCCTATCATCTTCAGGATGATTACCAAAACCACCGCTTTTAG 1986 45.37 MTQPVKKPEVEELCFAHSPDIITEDLTPDECNSTVEDQEATLIALVEHRTREVHHLQQRISYYTRQLEEAEKRLQESESLLARSQGPRYTLPSRSSQDCGFECVEAEPRSTSPIHGNGGLEAKPLLGSSHNPSIPNRSNLATTGEQEKPCMVTIGRVDDQSDRKRRKFGPPMFALMMPALCISEQKDHKELISLVRSSSSSLTAQPDASYYLTSQHKRKLRSLAPGPVNDQLFVTRYKAHIGIEGLLLLFFVLQTVCLKSRGDDLKKASVTFLEDKPHVKGIINDISFLPWDSVPFITGGSDHAVVLWNMRDKYNTWKPELLHRNLHSSAVLGVSGMQMKQIVLSAGSDKRLLGFDVQVGSTVFKHQLESKCMSVLPNPCDFNLFMVQTGSPENQLRLFDIRLEQKEVHRFGWKQENSESQSALIKQSWSPNGLHLTYNSHMPSQSLKAHQKRVFKAVWLRSLPFLVSISSDLNIGLHKMVGKGKGTPRRRYIKEREKLKVDPKRGKRALCSDESEEENPFPIYSARSEHDTSAMVSALTQVITSGSGSGSSRSLSVVEEPAASARGDNEEGVKRESRHYRGVRQRPWGKWAAEIRDPKKAARVWLGTFDTAEAAALAYDEAALRFKGTKAKLNFPERLTTPPSYPYAPYHLQDDYQNHRF* 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 29896897 29904692 + Chy2G049740.1 Chy02g02707 222155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Chy02g02707 661 MobiDBLite consensus disorder prediction 564 578 - -
Chy02g02707 661 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 26 236 - -
Chy02g02707 661 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 266 480 - -
Chy02g02707 661 SUPERFAMILY DNA-binding domain 579 637 IPR016177 GO:0003677
Chy02g02707 661 MobiDBLite consensus disorder prediction 545 578 - -
Chy02g02707 661 PRINTS Ethylene responsive element binding protein signature 602 618 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 PRINTS Ethylene responsive element binding protein signature 580 591 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 MobiDBLite consensus disorder prediction 129 146 - -
Chy02g02707 661 Gene3D - 267 480 IPR015943 GO:0005515
Chy02g02707 661 ProSiteProfiles AP2/ERF domain profile. 579 636 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 Gene3D AP2/ERF domain 578 638 IPR036955 GO:0003700|GO:0006355
Chy02g02707 661 SMART rav1_2 579 642 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 SMART WD40_4 318 356 IPR001680 GO:0005515
Chy02g02707 661 SMART WD40_4 266 309 IPR001680 GO:0005515
Chy02g02707 661 SMART WD40_4 440 479 IPR001680 GO:0005515
Chy02g02707 661 CDD AP2 579 637 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 26 236 - -
Chy02g02707 661 Pfam AP2 domain 579 628 IPR001471 GO:0003700|GO:0006355
Chy02g02707 661 SUPERFAMILY WD40 repeat-like 278 480 IPR036322 GO:0005515
Chy02g02707 661 PANTHER TRANSDUCIN FAMILY PROTEIN / WD-40 REPEAT FAMILY PROTEIN 266 480 - -
Chy02g02707 661 Coils Coil 53 80 - -
Chy02g02707 661 MobiDBLite consensus disorder prediction 108 148 - -
       

Event-related genes

Select Gene_1 Gene_2 Event_name
Chy02g02707 Chy12g01142 CCT
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Chy02g02707 Chy-Chr2:29896897 Chy02g01009 Chy-Chr2:6807260 2.40E-30 dispersed
Chy12g01142 Chy-Chr12:16356464 Chy02g02707 Chy-Chr2:29896897 8.52E-136 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
17633 PF00847 AP2 2.50E-14 CL0081 Chy TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Chy02g02707 - - csv:101206361 812.757